Relevance of GC content to the conservation of DNA polymerase III/mismatch repair system in Gram-positive bacteria.

abstract：:Acute respiratory infection (ARI) is the most frequent cause for hospitalization in infants and young children. Using multiplexed nCounter technology to digitally quantify 600 human mRNAs in parallel with 14 virus- and 5 bacterium-specific RNAs, we characterized viral and bacterial presence in nasopharyngeal aspirates...

journal_title：Frontiers in microbiology

authors： Fukutani KF,Nascimento-Carvalho CM,Bouzas ML,Oliveira JR,Barral A,Dierckx T,Khouri R,Nakaya HI,Andrade BB,Van Weyenbergh J,de Oliveira CI

更新日期：2018-11-09 00:00:00

abstract：:Amplicon sequencing of 16S, ITS, and 18S regions of microbial genomes is a commonly used first step toward understanding microbial communities of interest for human health, agriculture, and the environment. Correlation network analysis is an emerging tool for investigating the interactions within these microbial commu...

journal_title：Frontiers in microbiology

authors： Brisson V,Schmidt J,Northen TR,Vogel JP,Gaudin A

更新日期：2019-03-20 00:00:00

abstract：:Complement is a tightly controlled arm of the innate immune system, facilitating phagocytosis and killing of invading pathogens. Factor H (FH) is the main fluid-phase inhibitor of the alternative pathway. Many pathogens can hijack FH from the host and protect themselves from complement-dependent killing. Candida albic...

journal_title：Frontiers in microbiology

authors： Kenno S,Speth C,Rambach G,Binder U,Chatterjee S,Caramalho R,Haas H,Lass-Flörl C,Shaughnessy J,Ram S,Gow NAR,Orth-Höller D,Würzner R

更新日期：2019-01-15 00:00:00

abstract：:Background/objectives: Whole genome sequencing (WGS) has proven to be a powerful subtyping tool for foodborne pathogenic bacteria like L. monocytogenes. The interests of genome-scale analysis for national surveillance, outbreak detection or source tracking has been largely documented. The genomic data however can be e...

journal_title：Frontiers in microbiology

authors： Henri C,Leekitcharoenphon P,Carleton HA,Radomski N,Kaas RS,Mariet JF,Felten A,Aarestrup FM,Gerner Smidt P,Roussel S,Guillier L,Mistou MY,Hendriksen RS

更新日期：2017-11-29 00:00:00

abstract：:Host population density is positively associated with the strength of social interactions or the frequency of physical contacts, and thus potentially influences microbial transmission among individuals. However, the relationship between host density and gut microbiota remains unknown. Here, we characterized the gut mi...

journal_title：Frontiers in microbiology

authors： Li H,Qu J,Li T,Li J,Lin Q,Li X

更新日期：2016-05-18 00:00:00

abstract：:Incompatibility group C (IncC) plasmids have received attention due to their broad host range and because they harbor key antibiotic resistance genes. Because these resistance genes can spread from food-producing animals to human, the proliferation of these plasmids represents a public health risk. In this study, a to...

journal_title：Frontiers in microbiology

authors： Zhang Y,Lei CW,Chen X,Yao TG,Yu JW,Hu WL,Mao X,Wang HN

更新日期：2020-10-27 00:00:00

abstract：:Iron is an essential but, in excess, toxic nutrient. Therefore, fungi evolved fine-tuned mechanisms for uptake and storage of iron, such as the production of siderophores (low-molecular mass iron-specific chelators). In Aspergillus fumigatus, iron starvation causes extensive transcriptional remodeling involving two ce...

journal_title：Frontiers in microbiology

authors： Haas H

更新日期：2012-02-06 00:00:00

abstract：:In the present study, the β-glucosidase positive strain Lactobacillus plantarum F3. 3 was used as starter during the fermentation of Sicilian table olives (Nocellara Etnea cultivar) at two different salt concentrations (5 and 8%), in order to accelerate the debittering process. The latter was monitored through the inc...

journal_title：Frontiers in microbiology

authors： Pino A,Vaccalluzzo A,Solieri L,Romeo FV,Todaro A,Caggia C,Arroyo-López FN,Bautista-Gallego J,Randazzo CL

更新日期：2019-02-08 00:00:00

abstract：:The widespread use of cefuroxime (XM) has resulted in the increase in its concentration in hospital and domestic wastewaters. Due to the limited removal of antibiotics and antibiotic-resistant genes in conventional systems, the drugs enter the surface water and soils. Moreover, the introduction of XM and/or XM-resista...

journal_title：Frontiers in microbiology

authors： Orlewska K,Piotrowska-Seget Z,Cycoń M

更新日期：2018-06-26 00:00:00

abstract：:Arid and semi-arid regions comprise nearly one-fifth of the earth's terrestrial surface. However, the diversities and functions of their soil microbial communities are not well understood, despite microbial ecological importance in driving biogeochemical cycling. Here, we analyzed the geochemistry and microbial commun...

journal_title：Frontiers in microbiology

authors： Ren M,Zhang Z,Wang X,Zhou Z,Chen D,Zeng H,Zhao S,Chen L,Hu Y,Zhang C,Liang Y,She Q,Zhang Y,Peng N

更新日期：2018-03-09 00:00:00

abstract：:Safety and protective efficacy of recombinant multi-epitope subunit vaccine (r-AK36) was evaluated in a mouse model. Recombinant AK36 protein comprised of immunodominant antigens from outer membrane proteins (Omp's) of Klebsiella pneumoniae namely OmpA and OmpK36. r-AK36 was highly immunogenic and the hyperimmune sera...

journal_title：Frontiers in microbiology

authors： Babu L,Uppalapati SR,Sripathy MH,Reddy PN

更新日期：2017-09-20 00:00:00

abstract：:Bacillus amyloliquefaciens SQR9 exhibited predominantly antagonistic activities against a broad range of soilborne pathogens. The fungi-induced SQR9 extracts possess stronger antifungal activities compared with SQR9 monoculture extracts. To investigate how SQR9 fine-tunes lipopeptides (LPs) and a siderophore bacilliba...

journal_title：Frontiers in microbiology

authors： Li B,Li Q,Xu Z,Zhang N,Shen Q,Zhang R

更新日期：2014-11-21 00:00:00

abstract：:Chlorpyrifos (CP) is one of the most widely used organophosphate pesticides in agriculture worldwide, but its extensive use has led to the contamination of various soil and water systems. Microbial bioremediation is considered to be one of the most viable options for the removal of CP from the environment; however, li...

journal_title：Frontiers in microbiology

authors： Rayu S,Nielsen UN,Nazaries L,Singh BK

更新日期：2017-04-04 00:00:00

abstract：:Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne viral disease affecting hundreds of people in China each year. To better understand the epidemiological characteristics and environmental risk factors associated with the incidence of SFTS in Hubei Province, China, we conducted a retrospective epidemio...

journal_title：Frontiers in microbiology

authors： Wang T,Li XL,Liu M,Song XJ,Zhang H,Wang YB,Tian BP,Xing XS,Li SY

更新日期：2017-03-08 00:00:00

abstract：:Populations of genetically identical microorganisms residing in the same environment can display marked variability in their phenotypic traits; this phenomenon is termed phenotypic heterogeneity. The relevance of such heterogeneity in natural habitats is unknown, because phenotypic characterization of a sufficient num...

journal_title：Frontiers in microbiology

authors： Zimmermann M,Escrig S,Hübschmann T,Kirf MK,Brand A,Inglis RF,Musat N,Müller S,Meibom A,Ackermann M,Schreiber F

更新日期：2015-04-16 00:00:00

abstract：:Methicillin-resistant Staphylococcus aureus (MRSA) is a multidrug-resistant pathogen and one of the leading causes of nosocomial infection worldwide. Probiotic bacteria play a significant role in preventive or therapeutic interventions of gastrointestinal infections in human as well as animals. In this study, we have ...

journal_title：Frontiers in microbiology

authors： Jayashree S,Karthikeyan R,Nithyalakshmi S,Ranjani J,Gunasekaran P,Rajendhran J

更新日期：2018-03-08 00:00:00

abstract：:Accurately identifying bacteriophage virion proteins from uncharacterized sequences is important to understand interactions between the phage and its host bacteria in order to develop new antibacterial drugs. However, identification of such proteins using experimental techniques is expensive and often time consuming; ...

journal_title：Frontiers in microbiology

authors： Manavalan B,Shin TH,Lee G

更新日期：2018-03-16 00:00:00

abstract：:The predatory bacterium B. bacteriovorus grows and divides inside the periplasm of Gram-negative bacteria, forming a structure known as a bdelloplast. Cell division of predators inside the dead prey cell is not by binary fission but instead by synchronous division of a single elongated filamentous cell into odd or eve...

journal_title：Frontiers in microbiology

authors： Milner DS,Ray LJ,Saxon EB,Lambert C,Till R,Fenton AK,Sockett RE

更新日期：2020-04-21 00:00:00

abstract：:The human immune response that controls Plasmodium infection in the liver and blood stages of the parasite life cycle is composed by both pro- and anti-inflammatory programs. Pro-inflammatory responses primarily mediated by IFN-γ controls the infection, but also induce tolerogenic mechanisms to limit host damage, incl...

journal_title：Frontiers in microbiology

authors： Dos Santos RO,da Cruz MGS,Lopes SCP,Oliveira LB,Nogueira PA,Lima ES,Soares IS,Kano FS,de Carvalho AT,Costa FTM,Ganoza CA,de Lacerda MVG,Lalwani P

更新日期：2020-03-17 00:00:00

abstract：:RNA silencing mediated by microRNAs (miRNAs) is a recently discovered gene regulatory mechanism involved in various aspects of biology, such as development, cell differentiation and proliferation, and innate immunity against viral infections. miRNAs, which are a class of small (21-25 nucleotides) RNAs, target messenge...

journal_title：Frontiers in microbiology

authors： Tsunetsugu-Yokota Y,Yamamoto T

更新日期：2010-10-13 00:00:00

abstract：:Root-associated fungi are key contributors to ecosystem functioning, however, the factors which determine community assembly are still relatively poorly understood. This study simultaneously quantified the roles of geographical distance, environmental heterogeneity and time in determining root-associated fungal commun...

journal_title：Frontiers in microbiology

authors： Barnes CJ,van der Gast CJ,Burns CA,McNamara NP,Bending GD

更新日期：2016-02-25 00:00:00

abstract：:High-throughput sequencing (HTS) techniques are of great value for the investigation of microbial communities, and have been extensively used to study the gut microbiome. While most studies focus on the human gut, many others have investigated insects. However, because of the rapid spread of HTS techniques, a lot of v...

journal_title：Frontiers in microbiology

authors： De Cock M,Virgilio M,Vandamme P,Augustinos A,Bourtzis K,Willems A,De Meyer M

更新日期：2019-12-13 00:00:00

abstract：:The present study explored the possible prebiotic application of potato peel and bamboo shoot extracts for the proliferation of lactic acid bacteria (LAB) from diverse niches and their tolerance ability to simulated gastrointestinal tract (GIT) conditions was also examined. Initially, the complete 16S rDNA sequencing ...

journal_title：Frontiers in microbiology

authors： Thakur K,Xu GY,Zhang JG,Zhang F,Hu F,Wei ZJ

更新日期：2018-09-05 00:00:00

abstract：:As a natural severe contaminant of stored grains and other crops worldwide, Aspergillus flavus can produce aflatoxins (AFs), the most powerful naturally producing toxic and hepatocarcinogenic compounds. AFs production is regulated by diverse factors including AFs cluster genes, transcription factors, regulators, and e...

journal_title：Frontiers in microbiology

authors： Li X,Jiang Y,Ma L,Ma X,Liu Y,Shan J,Ma K,Xing F

更新日期：2020-07-14 00:00:00

abstract：:The Yilgarn Craton in Australia has a large number of naturally occurring shallow ephemeral lakes underlain by a dendritic system of paleodrainage channels. Processes like evaporation, flooding, erosion, as well as inflow of saline, often acidic and ion-rich groundwater contribute to the (dynamic) nature of the lakes ...

journal_title：Frontiers in microbiology

authors： Aerts JW,van Spanning RJM,Flahaut J,Molenaar D,Bland PA,Genge MJ,Ehrenfreund P,Martins Z

更新日期：2019-05-06 00:00:00

abstract：:Soil microbes are driver of nutrient cycling, with microbial function affected by community composition and soil chemical property. Legume and grass are ubiquitous in many ecosystems, however, their differential effects on microbial function are less understood. Here we constructed compartmented rhizobox planted with ...

journal_title：Frontiers in microbiology

authors： Zhou Y,Qin Y,Liu X,Feng Z,Zhu H,Yao Q

更新日期：2019-04-12 00:00:00

abstract：:Haemophilus parasuis is known as a commensal organism discovered in the upper respiratory tract of swine where the pathogenic bacteria survive in various adverse environmental stress. QseC, a histidine protein kinase of the two-component regulatory systems CheY/QseC, is involved in the environmental adaptation in bact...

journal_title：Frontiers in microbiology

authors： He L,Dai K,Wen X,Ding L,Cao S,Huang X,Wu R,Zhao Q,Huang Y,Yan Q,Ma X,Han X,Wen Y

更新日期：2018-02-13 00:00:00

abstract：:We have characterized the single subunit RNA polymerase from Klebsiella phage KP34. The enzyme is unique among known bacteriophage RNA polymerases in that it recognizes two unrelated promoter sequences, which provided clues for the evolution of phage single-subunit RNA polymerases. As the first representative enzyme f...

journal_title：Frontiers in microbiology

authors： Lu X,Wu H,Xia H,Huang F,Yan Y,Yu B,Cheng R,Drulis-Kawa Z,Zhu B

更新日期：2019-10-31 00:00:00

abstract：:Root-colonizing bacteria can support plant growth and help fend off pathogens. It is clear that such bacteria benefit from plant-derived carbon, but it remains ambiguous why they invest in plant-beneficial traits. We suggest that selection via protist predation contributes to recruitment of plant-beneficial traits in ...

journal_title：Frontiers in microbiology

authors： Amacker N,Gao Z,Agaras BC,Latz E,Kowalchuk GA,Valverde CF,Jousset A,Weidner S

更新日期：2020-12-15 00:00:00

abstract：:Bdellovibrio bacteriovorus is a predatory bacterium that feeds upon and proliferates inside other Gram-negative bacteria. Upon entry into the periplasmic space of the prey envelope, B. bacteriovorus initiates an exquisite developmental program in which it digests the host resources and grows as a filament, which event...

journal_title：Frontiers in microbiology

authors： Laloux G

更新日期：2020-01-21 00:00:00