Mg2+-paracrystal formation of tropomyosin as a condensation phenomenon. Effects of pH, salt, temperature, and troponin binding.

Abstract:

:Tropomyosin (Tm) paracrystal formation induced by Mg2+ was studied by monitoring increases in light scattering. Paracrystals formed above a critical Tm concentration with lag phases in the time courses at pH 7.5 and 6.0, indicating that condensation polymerization processes are involved. The kinetic data at pH 7.5 reasonably fit a model in which nucleation and elongation are taken into account. The rate and extent of light scattering increased at low [Mg2+] and decreased at high [Mg2+] with a maximum at [Mg2+] = 15 mM, indicating different effects of Mg2+ in the two [Mg2+] ranges. The paracrystals were destabilized by increasing the salt concentration and decreasing the temperature. Mg2+ produces paracrystals at pH 6.0 and pH 7.5 by different kinetic mechanisms. Different Tm intermolecular interactions at the two pH values were indicated by studies of the excimer fluorescence of pyrene-labeled Tm and by effects of salt and temperature on the kinetics. At pH 6.0 Tm more readily formed paracrystals with decreased electrostatic effects. Effects of troponin on Mg2+-paracrystal formation of Tm at the two pH values correlated with the known differences in paracrystal structure when troponin is bound to Tm.

journal_name

Biophys J

journal_title

Biophysical journal

authors

Ishii Y,Lehrer SS

doi

10.1016/S0006-3495(89)82655-4

subject

Has Abstract

pub_date

1989-07-01 00:00:00

pages

107-14

issue

1

eissn

0006-3495

issn

1542-0086

pii

S0006-3495(89)82655-4

journal_volume

56

pub_type

杂志文章
  • The dependence of impulse propagation speed on firing frequency, dispersion, for the Hodgkin-Huxley model.

    abstract::Propagation speed of an impulse is influenced by previous activity. A pulse following its predecessor too closely may travel more slowly than a solitary pulse. In contrast, for some range of interspike intervals, a pulse may travel faster than normal because of a possible superexcitable phase of its predecessor's wake...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(81)84847-3

    authors: Miller RN,Rinzel J

    更新日期:1981-05-01 00:00:00

  • Protein-protein interactions in calcium transport regulation probed by saturation transfer electron paramagnetic resonance.

    abstract::We have used electron paramagnetic resonance (EPR) to probe the homo- and heterooligomeric interactions of reconstituted sarcoplasmic reticulum Ca-ATPase (SERCA) and its regulator phospholamban (PLB). SERCA is responsible for restoring calcium to the sarcoplasmic reticulum to allow muscle relaxation, whereas PLB inhib...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.08.032

    authors: James ZM,McCaffrey JE,Torgersen KD,Karim CB,Thomas DD

    更新日期:2012-09-19 00:00:00

  • Lateral diffusivity of lipid analogue excimeric probes in dimyristoylphosphatidylcholine bilayers.

    abstract::The lateral mobility of pyrenyl phospholipid probes in dimyristoylphosphatidylcholine (DMPC) vesicles was determined from the dependence of the pyrene monomeric and excimeric fluorescence yields on the molar probe ratio. The analysis of the experimental data makes use of the milling crowd model for two-dimensional dif...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(90)82530-3

    authors: Sassaroli M,Vauhkonen M,Perry D,Eisinger J

    更新日期:1990-02-01 00:00:00

  • Preferential hydration of DNA: the magnitude and distance dependence of alcohol and polyol interactions.

    abstract::The physical forces that underlie the exclusion of solutes from macromolecular surfaces can be probed in a similar way as the measurement of forces between macromolecules in condensed arrays using the osmotic stress technique and x-ray scattering. We report here the dependence of alcohol exclusion or, equivalently, th...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.106.086579

    authors: Stanley C,Rau DC

    更新日期:2006-08-01 00:00:00

  • Binding mechanism of the peptidoglycan hydrolase Acm2: low affinity, broad specificity.

    abstract::Peptidoglycan hydrolases are bacterial secreted enzymes that cleave covalent bonds in the cell-wall peptidoglycan, thereby fulfilling major physiological functions during cell growth and division. Although the molecular structure and functional roles of these enzymes have been widely studied, the molecular details und...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.06.035

    authors: Beaussart A,Rolain T,Duchêne MC,El-Kirat-Chatel S,Andre G,Hols P,Dufrêne YF

    更新日期:2013-08-06 00:00:00

  • In situ mechanical analysis of myofibrillar perturbation and aging on soft, bilayered Drosophila myocardium.

    abstract::Drosophila melanogaster is a genetically malleable organism with a short life span, making it a tractable system in which to study mechanical effects of genetic perturbation and aging on tissues, e.g., impaired heart function. However, Drosophila heart-tube studies can be hampered by its bilayered structure: a ventral...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.10.042

    authors: Kaushik G,Fuhrmann A,Cammarato A,Engler AJ

    更新日期:2011-12-07 00:00:00

  • Analysis of a Functional Dimer Model of Ubiquinol Cytochrome c Oxidoreductase.

    abstract::Ubiquinol cytochrome c oxidoreductase (bc1 complex) serves as an important electron junction in many respiratory systems. It funnels electrons coming from NADH and ubiquinol to cytochrome c, but it is also capable of producing significant amounts of the free radical superoxide. In situ and in other experimental system...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.08.018

    authors: Bazil JN

    更新日期:2017-10-03 00:00:00

  • Experimental measurement of the stiffness of the cupula.

    abstract::An experimental procedure is described which consists of cutting the canal duct, inserting a micropipette and administering known volumetric displacements to the cupula. The cupula is made visible by dying the endolymph. Known displacements are administered to the cupula, and the time constant of the return to its equ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(76)85720-7

    authors: Grant JW,Van Buskirk WC

    更新日期:1976-06-01 00:00:00

  • Structural Impact of Phosphorylation and Dielectric Constant Variation on Synaptotagmin's IDR.

    abstract::We used time-resolved Förster resonance energy transfer, circular dichroism, and molecular dynamics simulation to investigate the structural dependence of synaptotagmin 1's intrinsically disordered region (IDR) on phosphorylation and dielectric constant. We found that a peptide corresponding to the full-length IDR seq...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.12.013

    authors: Fealey ME,Binder BP,Uversky VN,Hinderliter A,Thomas DD

    更新日期:2018-02-06 00:00:00

  • Three-dimensional modeling of the brain's ECS by minimum configurational energy packing of fluid vesicles.

    abstract::The extracellular space of the brain is the heterogeneous porous medium formed by the spaces between the brain cells. Diffusion in this interstitial space is the mechanism by which glucose and oxygen are delivered to the brain cells from the vascular system. It is also a medium for the transport of certain information...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.106.095547

    authors: Nandigam RK,Kroll DM

    更新日期:2007-05-15 00:00:00

  • Single-Molecule Imaging in Living Drosophila Embryos with Reflected Light-Sheet Microscopy.

    abstract::In multicellular organisms, single-fluorophore imaging is obstructed by high background. To achieve a signal/noise ratio conducive to single-molecule imaging, we adapted reflected light-sheet microscopy (RLSM) to image highly opaque late-stage Drosophila embryos. Alignment steps were modified by means of commercially ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2015.12.035

    authors: Greiss F,Deligiannaki M,Jung C,Gaul U,Braun D

    更新日期:2016-02-23 00:00:00

  • Penetration depth of surfactant peptide KL4 into membranes is determined by fatty acid saturation.

    abstract::KL(4) is a 21-residue functional peptide mimic of lung surfactant protein B, an essential protein for lowering surface tension in the alveoli. Its ability to modify lipid properties and restore lung compliance was investigated with circular dichroism, differential scanning calorimetry, and solid-state NMR spectroscopy...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2008.12.3966

    authors: Antharam VC,Elliott DW,Mills FD,Farver RS,Sternin E,Long JR

    更新日期:2009-05-20 00:00:00

  • UVA generates pyrimidine dimers in DNA directly.

    abstract::There is increasing evidence that UVA radiation, which makes up approximately 95% of the solar UV light reaching the Earth's surface and is also commonly used for cosmetic purposes, is genotoxic. However, in contrast to UVC and UVB, the mechanisms by which UVA produces various DNA lesions are still unclear. In additio...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2008.10.030

    authors: Jiang Y,Rabbi M,Kim M,Ke C,Lee W,Clark RL,Mieczkowski PA,Marszalek PE

    更新日期:2009-02-01 00:00:00

  • Biophysics and the Genomic Sciences.

    abstract::It is now rare to find biological, or genetic investigations that do not rely on the tools, data, and thinking drawn from the genomic sciences. Much of this revolution is powered by contemporary sequencing approaches that readily deliver large, genome-wide data sets that not only provide genetic insights but also uniq...

    journal_title:Biophysical journal

    pub_type: 杂志文章,评审

    doi:10.1016/j.bpj.2019.07.038

    authors: Schwartz DC

    更新日期:2019-12-03 00:00:00

  • Light scattering at various angles. Theoretical predictions of the effects of particle volume changes.

    abstract::The Mie theory of scattering is used to provide new information on how changes in particle volume, with no change in dry weight, should influence light scattering for various scattering angles and particle sizes. Many biological cells (e.g., algal cells, erythrocytes) and large subcellular structures (e.g., chloroplas...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(72)86120-4

    authors: Latimer P,Pyle BE

    更新日期:1972-07-01 00:00:00

  • Calcium-actin waves and oscillations of cellular membranes.

    abstract::We propose a mechanism for the formation of membrane oscillations and traveling waves, which arise due to the coupling between the actin cytoskeleton and the calcium flux through the membrane. In our model, the fluid cell membrane has a mobile but constant population of proteins with a convex spontaneous curvature, wh...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2009.07.008

    authors: Veksler A,Gov NS

    更新日期:2009-09-16 00:00:00

  • Lipid bilayer deformation and the free energy of interaction of a Kv channel gating-modifier toxin.

    abstract::A number of membrane proteins act via binding at the water/lipid bilayer interface. An important example of such proteins is provided by the gating-modifier toxins that act on voltage-gated potassium (Kv) channels. They are thought to partition to the headgroup region of lipid bilayers, and so provide a good system fo...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.108.130971

    authors: Wee CL,Gavaghan D,Sansom MS

    更新日期:2008-10-01 00:00:00

  • Torque generation by the flagellar rotary motor.

    abstract::A review is given of the structure and dynamics of the flagellar rotary motor. Force-generating elements in a motor driving a tethered bacterium (a cell fixed to the substratum by a single flagellum) exert forces of order 20 pN while moving at speeds of order 1 micron/s. Force-generating elements in a motor driving a ...

    journal_title:Biophysical journal

    pub_type: 杂志文章,评审

    doi:

    authors: Berg HC

    更新日期:1995-04-01 00:00:00

  • Lipid Droplet Phase Transition in Freezing Cat Embryos and Oocytes Probed by Raman Spectroscopy.

    abstract::Embryo and oocyte cryopreservation is a widely used technology for cryopreservation of genetic resources. One limitation of cryopreservation is the low tolerance to freezing observed for oocytes and embryos rich in lipid droplets. We apply Raman spectroscopy to investigate freezing of lipid droplets inside cumulus-ooc...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2018.06.019

    authors: Okotrub KA,Mokrousova VI,Amstislavsky SY,Surovtsev NV

    更新日期:2018-08-07 00:00:00

  • Intramural multisite recording of transmembrane potential in the heart.

    abstract::Heart surface optical mapping of transmembrane potentials has been widely used in studies of normal and pathological heart rhythms and defibrillation. In these studies, three-dimensional spatio-temporal events can only be inferred from two-dimensional surface potential maps. We present a novel optical system that enab...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(01)75910-3

    authors: Hooks DA,LeGrice IJ,Harvey JD,Smaill BH

    更新日期:2001-11-01 00:00:00

  • Instabilities in the transient response of muscle.

    abstract::We investigate the isometric transient response of muscle using a quantitative stochastic model of the actomyosin cycle based on the swinging lever-arm hypothesis. We first consider a single pair of filaments, and show that when values of parameters such as the lever-arm displacement and the cross-bridge elasticity ar...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(03)74522-6

    authors: Vilfan A,Duke T

    更新日期:2003-08-01 00:00:00

  • Noninvasive imaging of the distribution in oxygen in tissue in vivo using near-infrared phosphors.

    abstract::A newly developed water-soluble phosphor suitable for measuring oxygen pressure in the blood (Green 2W) was used for noninvasive, in vivo imaging of oxygen distribution in the vascular systems of mice. Oxygen quenches the phosphorescence of Green 2W, measured in the presence of 2% albumin, according to the Stern-volme...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79764-3

    authors: Vinogradov SA,Lo LW,Jenkins WT,Evans SM,Koch C,Wilson DF

    更新日期:1996-04-01 00:00:00

  • VOLUME CONDUCTOR FIELDS OF ACTION CURRENTS.

    abstract::The formulation of Lorente de Nó for the potential distribution in a volume conductor due to a contained bioelectric source is reviewed. The aforementioned formula is based on data taken from the bioelectric source in air (excised). This work is extended to the derivation of a formula which depends upon quantities ava...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/s0006-3495(64)86785-0

    authors: PLONSEY R

    更新日期:1964-07-01 00:00:00

  • Response of Single Cells to Shock Waves and Numerically Optimized Waveforms for Cancer Therapy.

    abstract::Shock waves are used clinically for breaking kidney stones and treating musculoskeletal indications. The mechanisms by which shock waves interact with tissue are still not well understood. Here, ultra-high-speed imaging was used to visualize the deformation of individual cells embedded in a tissue-mimicking phantom wh...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.09.042

    authors: Li D,Pellegrino A,Hallack A,Petrinic N,Jérusalem A,Cleveland RO

    更新日期:2018-03-27 00:00:00

  • A dynamic model of smooth muscle contraction.

    abstract::A dynamic model of smooth muscle contraction is presented and is compared with the mechanical properties of vascular smooth muscle in the rat portal vein. The model is based on the sliding filament theory and the assumption that force is produced by cross-bridges extending from the myosin to the actin filaments. Thus,...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(86)83448-8

    authors: Gestrelius S,Borgström P

    更新日期:1986-07-01 00:00:00

  • Gap junction structures. VIII. Membrane cross-sections.

    abstract::Profiles of negatively stained gap junctions have been measured by grid sectioning. After normal levels of electron irradiation, the membrane thickness shrinks to about half that of unirradiated controls, but no shrinkage occurs in the hexagonal lattice plane. Even under low irradiation conditions, there is significan...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(88)83152-7

    authors: Sosinsky GE,Jésior JC,Caspar DL,Goodenough DA

    更新日期:1988-05-01 00:00:00

  • Hindered diffusion in excised membrane patches from retinal rod outer segments.

    abstract::Excised inside-out membrane patches are useful for studying the cGMP-activated ion channels that generate the electrical response to light in retinal rod cells. We show that strong ionic current across a patch changes the driving force on the current by altering the ionic concentration near the surface membrane, an ef...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(88)82966-7

    authors: Zimmerman AL,Karpen JW,Baylor DA

    更新日期:1988-08-01 00:00:00

  • PrP(106-126) does not interact with membranes under physiological conditions.

    abstract::Transmissible spongiform encephalopathies are neurodegenerative diseases characterized by the accumulation of an abnormal isoform of the prion protein PrP(Sc). Its fragment 106-126 has been reported to maintain most of the pathological features of PrP(Sc), and a role in neurodegeneration has been proposed based on the...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.108.131458

    authors: Henriques ST,Pattenden LK,Aguilar MI,Castanho MA

    更新日期:2008-08-01 00:00:00

  • Isochron-based phase response analysis of circadian rhythms.

    abstract::Circadian rhythms possess the ability to robustly entrain to the environmental cycles. This ability relies on the phase synchronization of circadian rhythm gene regulation to different environmental cues, of which light is the most obvious and important. The elucidation of the mechanism of circadian entrainment requir...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.078006

    authors: Gunawan R,Doyle FJ 3rd

    更新日期:2006-09-15 00:00:00

  • Copper-based pulsed dipolar ESR spectroscopy as a probe of protein conformation linked to disease states.

    abstract::We demonstrate the ability of pulsed dipolar electron spin resonance (ESR) spectroscopy (PDS) to report on the conformation of Cu-Zn superoxide dismutase (SOD1) through the sensitive measurement of dipolar interactions between inherent Cu(2+) ions. Although the extent and the anisotropy of the Cu ESR spectrum provides...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2014.07.068

    authors: Merz GE,Borbat PP,Pratt AJ,Getzoff ED,Freed JH,Crane BR

    更新日期:2014-10-07 00:00:00