Monitoring of multiple bacteriocins through a developed dual extraction protocol and comparison of HPLC-DAD with turbidometry as their quantification system.

Abstract:

:The present study describes the development of a simple and efficient screening system that allows identification and quantification of nine bacteriocins produced by Lactococcus lactis. Cell-free L. lactis extracts presented a broad spectrum of antibacterial activity, including Gram-negative bacteria, Gram-positive bacteria, and fungi. The characterization of their sensitivity to pH, and heat, showed that the extracts retained their antibacterial activity at extreme pH values and in a wide temperature range. The loss of antibacterial activity following treatment of the extracts with lipase or protease suggests a lipoproteinaceous nature of the produced antimicrobials. The extracts were subjected to a purification protocol that employs a two phase extraction using ammonium sulfate precipitation and organic solvent precipitation, followed by ion exchange chromatography, solid phase extraction and HPLC. In the nine fractions that presented antimicrobial activity, bacteriocins were quantified by the turbidometric method using a standard curve of nisin and by the HPLC method with nisin as the external standard, with both methods producing comparable results. Turbidometry appears to be unique in the qualitative determination of bacteriocins but the only method suitable to both separate and quantify the bacteriocins providing increased sensitivity, accuracy, and precision is HPLC.

journal_name

J Microbiol Methods

authors

Katharopoulos E,Touloupi K,Touraki M

doi

10.1016/j.mimet.2016.06.003

subject

Has Abstract

pub_date

2016-08-01 00:00:00

pages

123-131

eissn

0167-7012

issn

1872-8359

pii

S0167-7012(16)30132-4

journal_volume

127

pub_type

杂志文章
  • Improving efficiency of viability-PCR for selective detection of live cells.

    abstract::Viability PCR (v-PCR) as a method to selectively detect intact live cells has gained considerable interest over the last years with an increasing number of applications. The principle is based on treatment of microbiological samples with a viability dye prior to extraction of genomic DNA and its amplification. The dye...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2013.01.018

    authors: Nkuipou-Kenfack E,Engel H,Fakih S,Nocker A

    更新日期:2013-04-01 00:00:00

  • Simplified amplified-fragment length polymorphism method for genotyping Mycobacterium tuberculosis isolates.

    abstract::A simplified amplified-fragment length polymorphism (AFLP) method was developed and applied to genotype 52 Mycobacterium tuberculosis isolates. This method can be carried out using only one restriction enzyme (XhoI), one double strand adapter, and one PCR primer. The amounts of DNA and DNA polymerase, and the concentr...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2009.07.007

    authors: Viader-Salvadó JM,Flores-Gracia J,Vega-Alonso AS,Treviño-Alvarado VM,Molina-Torres CA,Vera-Cabrera L,Guerrero-Olazarán M

    更新日期:2009-09-01 00:00:00

  • Methods used for the detection and subtyping of Listeria monocytogenes.

    abstract::Listeria monocytogenes is an important foodborne pathogen responsible for non-invasive and invasive diseases in the elderly, pregnant women, neonates and immunocompromised populations. This bacterium has many similarities with other non-pathogenic Listeria species which makes its detection from food and environmental ...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章,评审

    doi:10.1016/j.mimet.2012.01.002

    authors: Jadhav S,Bhave M,Palombo EA

    更新日期:2012-03-01 00:00:00

  • Assessment of Leishmania cell lines expressing high levels of beta-galactosidase as alternative tools for the evaluation of anti-leishmanial drug activity.

    abstract::Leishmaniasis, caused by protozoa belonging to the genus Leishmania, is an important public health problem found in >90 countries and with still limited options for treatment. Development of new anti-leishmanial drugs is an urgent need and the identification of new active compounds is a limiting factor that can be acc...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2019.105732

    authors: da Silva Santos AC,Moura DMN,Dos Santos TAR,de Melo Neto OP,Pereira VRA

    更新日期:2019-11-01 00:00:00

  • Improving qPCR efficiency in environmental samples by selective removal of humic acids with DAX-8.

    abstract::Quantitative PCR is becoming the method of choice for the detection of pathogenic microorganisms and other targets in the environment. A major obstacle when amplifying DNA is the presence of inhibiting substances like humic acids that decrease the efficiency of PCR. We combined the polymeric adsorbent Supelite™ DAX-8 ...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2010.12.027

    authors: Schriewer A,Wehlmann A,Wuertz S

    更新日期:2011-04-01 00:00:00

  • Applications of the green fluorescent protein as a molecular marker in environmental microorganisms.

    abstract::In this review, we examine numerous applications of the green fluorescent protein (GFP) marker gene in environmental microbiology research. The GFP and its variants are reviewed and applications in plant-microbe interactions, biofilms, biodegradation, bacterial-protozoan interactions, gene transfer, and biosensors are...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章,评审

    doi:10.1016/s0167-7012(99)00024-x

    authors: Errampalli D,Leung K,Cassidy MB,Kostrzynska M,Blears M,Lee H,Trevors JT

    更新日期:1999-04-01 00:00:00

  • Development of duplex PCR-ELISA for simultaneous detection of Salmonella spp. and Escherichia coli O157: H7 in food.

    abstract::In the current study, a duplex PCR-ELISA method was developed targeting the specific genes, invA of Salmonella spp. and rfbE of Escherichia coli O157: H7, to detect one or both bacteria in food. In brief, PCR product amplified by PCR primer labeled with digoxin at the 5'-end and a probe labeled with biotin at the 3'-e...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2018.10.017

    authors: Hu J,Huang R,Wang Y,Wei X,Wang Z,Geng Y,Jing J,Gao H,Sun X,Dong C,Jiang C

    更新日期:2018-11-01 00:00:00

  • Biofilm structure and cell vitality in a laboratory model of subgingival plaque.

    abstract::The accumulation of dental plaque below the gingival margin (i.e. subgingival plaque) is responsible for the most prevalent microbe-induced diseases of humans--the periodontal diseases. Access to this plaque is difficult, making studies of its structure in vivo very difficult. We have, therefore, used a constant-depth...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2006.01.003

    authors: Hope CK,Wilson M

    更新日期:2006-09-01 00:00:00

  • GenomeComp: a visualization tool for microbial genome comparison.

    abstract::We have developed a software tool, GenomeComp, for summarizing, parsing and visualizing the genome sequences comparison results derived from voluminous BLAST textual output. With GenomeComp, the variation between genomes can be easily highlighted, such as repeat regions, insertions, deletions and rearrangements of gen...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/s0167-7012(03)00094-0

    authors: Yang J,Wang J,Yao ZJ,Jin Q,Shen Y,Chen R

    更新日期:2003-09-01 00:00:00

  • Gene transfection of Toxoplasma gondii using PEI/DNA polyplexes.

    abstract::The purpose of this study was to explore the potential of using cationic polyethylenimine (PEI) to deliver green fluorescent protein (GFP) to protozoan parasite Toxoplasma gondii. PEI/DNA polyplexes were formed using branched PEI and pEGFP-N1 plasmid with various N/P ratios that ranged from 5 to 50. With the increment...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2012.08.001

    authors: Salehi N,Peng CA

    更新日期:2012-10-01 00:00:00

  • Use of viability staining in combination with flow cytometry for rapid viability assessment of Lactobacillus rhamnosus GG in complex protein matrices.

    abstract::The aim of this study was to demonstrate that flow cytometry (FACS) could potentially be employed for rapid viability assessment of probiotic bacteria immobilized or encapsulated in complex matrices. Lactobacillus rhamnosus GG was immobilized within six different protein environments using whey protein isolate (WPI) a...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2010.07.003

    authors: Doherty SB,Wang L,Ross RP,Stanton C,Fitzgerald GF,Brodkorb A

    更新日期:2010-09-01 00:00:00

  • Flow cytometry assessment of bacterioplankton in tropical marine environments.

    abstract::Flow cytometry was used to characterize bacterioplankton from two tropical environments in Brazil: the eutrophic Guanabara Bay and the oligotrophic southwest Atlantic Ocean. Bacterial abundance was evaluated by flow cytometry, and cells were stained with SYTO 13, allowing demonstration of differences in nucleic acid c...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2003.08.002

    authors: Andrade L,Gonzalez AM,Araujo FV,Paranhos R

    更新日期:2003-12-01 00:00:00

  • Improving the selection efficiency of the counter-selection marker pheS* for the genetic engineering of Bacillus amyloliquefaciens.

    abstract::Bacillus subtilis pheS was genetically modified to obtain a counter-selection marker with high selection efficiency in Bacillus amyloliquefaciens. The application of the new replication-thermosensitive integrative vector pNZTM1, containing this marker, pheSBsT255S/A309G, with a two-step replacement recombination proce...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2018.03.011

    authors: Kharchenko MS,Teslya PN,Babaeva MN,Zakataeva NP

    更新日期:2018-05-01 00:00:00

  • The use of a rapid assay to detect the neuraminidase production in oral Porphyromonas spp. isolated from dogs and humans.

    abstract::Neuraminidase was produced by 32.1% and 28.5% of Porphyromonas from dogs with and without periodontitis, respectively; and by 31.8% of bacteria from humans. The presence of neuraminidase in Porphyromonas spp. suggests that this enzyme can be involved with the pathogenesis of the periodontal disease, and the use of thi...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2013.06.017

    authors: de Assis PR,Nakano V,Senhorinho GN,Avila-Campos MJ

    更新日期:2013-09-01 00:00:00

  • PCR-DGGE analysis for the identification of microbial populations from Argentinean dry fermented sausages.

    abstract::Different PCR-DGGE protocols were evaluated to monitor fermentation process and to investigate bacterial communities developed in two artisanal Argentinean fermented sausages. Bacterial universal primers frequently used in PCR-denaturing gradient gel electrophoresis (DGGE) were evaluated. Lactic acid bacteria (LAB) an...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2005.03.010

    authors: Fontana C,Vignolo G,Cocconcelli PS

    更新日期:2005-12-01 00:00:00

  • The utility of banana peel extract agar in the presumptive identification of Cryptococcus neoformans.

    abstract::We prepared a newer growth medium, banana peel extract agar (BPEA) containing the extracts of chopped banana peels for the selective cultivation of Cryptococcus neoformans. Over the medium, the growth resulted in the development of light to the dark brown coloured colonies indicating the chromogenic potential of the B...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2020.106046

    authors: Gupta MK,Mallick P,Pandey N,Shankar V,Chakravarty J,Tilak R

    更新日期:2020-10-01 00:00:00

  • A new method for the preservation of axenic fungal cultures.

    abstract::Microbiological work requires a reliable source of cultures that are not only well defined and taxonomically determined, but are also adequately preserved without changes in their morphological, physiological and genetic traits. Here we describe an easy, cost effective and rapid method for reliably preserving filament...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2014.02.009

    authors: Hu X,Webster G,Xie L,Yu C,Li Y,Liao X

    更新日期:2014-04-01 00:00:00

  • A reverse-hybridization test for the identification of 76 pneumococcal serotypes, 42 individually and 34 in pairs.

    abstract::The S. PneumoStrip test is a recently developed reverse hybridization strip-based commercial assay that allows for the identification of 76 pneumococcal serotypes, 42 individually and 34 in pairs, according to their specific gene sequences. The test was validated with reference strains of 92 different pneumococcal ser...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2017.08.010

    authors: Marimón JM,Morales M,Gamen S,Manrique A,Ercibengoa M,Cilla G

    更新日期:2017-12-01 00:00:00

  • 13CO2 pulse labelling of plants in tandem with stable isotope probing: methodological considerations for examining microbial function in the rhizosphere.

    abstract::Recently developed 13CO2 pulse labelling and stable isotope probing (SIP) methods offer the potential to track 13C-labelled plant photosynthate into phylogenetic groups of microbial taxa in the rhizosphere, permitting an examination of the link between soil microbial diversity and carbon flow in situ. We tested the fe...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2004.03.011

    authors: Griffiths RI,Manefield M,Ostle N,McNamara N,O'Donnell AG,Bailey MJ,Whiteley AS

    更新日期:2004-07-01 00:00:00

  • Strain discrimination among B. anthracis and related organisms by characterization of bclA polymorphisms using PCR coupled with agarose gel or microchannel fluidics electrophoresis.

    abstract::The bclA gene codes for the protein backbone of the exosporium glycoprotein BclA of B. anthracis. BclA has a central collagen-like region formed by polymorphic GXX repeats and conserved amino- and carboxy-termini. It is noted here that the bclA gene is also present in the genome of Bacillus cereus and Bacillus thuring...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2005.04.032

    authors: Castanha ER,Swiger RR,Senior B,Fox A,Waller LN,Fox KF

    更新日期:2006-01-01 00:00:00

  • Improved gene disruption method and Cre-loxP mutant system for multiple gene disruptions in Hansenula polymorpha.

    abstract::In H. polymorpha, there is still a lack of a highly efficient gene disruption method. To help address this issue, we presented a simple and efficient method for both single and multiple gene disruptions in H. polymorpha. The knockout system combined a variation of sticky-end polymerase chain reaction method (SEP), spl...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2009.09.004

    authors: Qian W,Song H,Liu Y,Zhang C,Niu Z,Wang H,Qiu B

    更新日期:2009-12-01 00:00:00

  • An efficient DNA isolation protocol for filamentous cyanobacteria of the genus Arthrospira.

    abstract::Thanks to their photosynthetic and nutritive properties, cyanobacteria of the Arthrospira genus are of interest as food supplements, as efficient oxygen producing life support system organisms for manned space flight, and for the production of biofuels. Despite these potential valuable applications, full genome sequen...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2009.11.012

    authors: Morin N,Vallaeys T,Hendrickx L,Natalie L,Wilmotte A

    更新日期:2010-02-01 00:00:00

  • Consistent production of chlorine-stressed bacteria from non-chlorinated secondary sewage effluents for use in the U.S. Environmental Protection Agency Alternate Test Procedure protocol.

    abstract::The U.S. Environmental Protection Agency Alternative Test Procedure protocol outlines a method to produce chlorine-stressed bacteria for water quality testing. Achieving consistent results is challenging due effluent variability. We describe a starting point for generating chlorine-stressed samples from secondary effl...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2019.105651

    authors: Hutchison JR,Widder MW,Brooks SM,Brennan LM,Souris L,Divito VT,van der Schalie WH,Ozanich RM

    更新日期:2019-08-01 00:00:00

  • Epidemiological investigation and glycotyping of clinical Pseudomonas aeruginosa isolates from patients with cystic fibrosis by mass spectrometry: association with multiple drug resistance.

    abstract::The aim of the present investigation was to develop a novel approach for rapid identification and differentiation of Pseudomonas aeruginosa clones from Canadian cystic fibrosis patients by capillary electrophoresis-mass spectrometry. We screened P. aeruginosa isolates for lipopolysaccharide structure and presence/abse...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2008.10.008

    authors: Altman E,Wang Z,Aaron SD,Liu X,Vandemheen KL,Ferris W,Giesbrecht T,Li J

    更新日期:2009-02-01 00:00:00

  • Novel amplification targets for rapid detection and differentiation of Xylella fastidiosa subspecies fastidiosa and multiplex in plant and insect tissues.

    abstract::Xylella fastidiosa is an insect-transmitted bacterial plant pathogen which causes a variety of economically important diseases worldwide. Molecular identification of X. fastidiosa is used for quarantine screening, surveillance, and research applications; many of which require subspecies level differentiation of pathog...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2018.11.002

    authors: Burbank LP,Ortega BC

    更新日期:2018-12-01 00:00:00

  • Consecutive analysis of bacterial PCR samples on a single electronic microarray.

    abstract::For routine mass screening, the use of microarrays is hampered because one chip can only analyze one sample. 16S rRNA gene PCR products of several bacterial strains or mixtures thereof were consecutively loaded on a single electronic microarray and successfully analyzed using probes specific for the bacterial strains....

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/s0167-7012(03)00168-4

    authors: Zimmermann K,Eiter T,Scheiflinger F

    更新日期:2003-11-01 00:00:00

  • Hydrophysical correlation and water mass indication of optical physiological parameters of picophytoplankton in Prydz Bay during autumn 2008.

    abstract::Flow cytometry (FCM) is efficient in detecting both abundance and optical physiological parameters including cell size and cellular carbon content-side scatter (SSC), carotenoids-green and orange fluorescence (FL1 and FL2), and red fluorescence-chlorophylls (FL3) can be obtained by FCM. The utilization of these physio...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2012.09.030

    authors: Zhang F,Ma Y,Lin L,He J

    更新日期:2012-12-01 00:00:00

  • Use of competitive DNA hybridization to identify differences in the genomes of bacteria.

    abstract::Although recent technological advances in DNA sequencing and computational biology now allow scientists to compare entire microbial genomes, comparisons of closely related bacterial species and individual isolates by whole-genome sequencing approaches remains prohibitively expensive for most laboratories. Here we repo...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2005.12.006

    authors: Shanks OC,Santo Domingo JW,Graham JE

    更新日期:2006-08-01 00:00:00

  • Improved 16S rRNA-targeted probe set for analysis of sulfate-reducing bacteria by fluorescence in situ hybridization.

    abstract::An updated dataset of in silico specificities for 54 previously published 16S rRNA-targeted oligonucleotides was assembled to provide guidance for reliable fluorescence in situ hybridization (FISH) analysis of sulfate-reducing bacteria. Additionally, six new FISH probes were developed for major deltaproteobacterial ta...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2007.02.009

    authors: Lücker S,Steger D,Kjeldsen KU,MacGregor BJ,Wagner M,Loy A

    更新日期:2007-06-01 00:00:00

  • Rapid detection of Haemophilus parasuis using cross-priming amplification and vertical flow visualization.

    abstract::Haemophilus parasuis infection is of considerable economic importance in the swine industry due to high morbidity and mortality in naive swine populations. Accurate detection and identification of the causative agent are difficult, yet necessary, for disease control. In this study, a simple and rapid method of cross-p...

    journal_title:Journal of microbiological methods

    pub_type: 杂志文章

    doi:10.1016/j.mimet.2017.11.005

    authors: Gou H,Li J,Cai R,Song S,Li M,Yang D,Jiang Z,Li Y,Chu P,Li C

    更新日期:2018-01-01 00:00:00