Abstract:
:Two terminally blocked peptides, acetylAETAAAKFLRQHMamide and acetylAETSSSRYLRQHMamide, were obtained by solid-phase synthesis, purified by reversed-phase chromatography, and characterized by fast atom bombardment mass spectrometry. Both peptides were soluble in aqueous solutions and remained monomeric over the concentration range examined. Changes in the temperature, pH, and trifluoroethanol concentration of solutions of each peptide produced changes in the far-ultraviolet circular dichroic spectrum characteristic of a two-state helix/coil transition. The limiting mean residue ellipticity of the coil and helix form of each peptide was estimated by addition of the denaturant guanidinium chloride at elevated temperature and by addition of trifluoroethanol at subzero temperatures, respectively. The midpoint for the thermal transition of the peptide SSSRY is lowered by about 30 degrees C relative to that of peptide AAAKF, in qualitative agreement from predictions based on helix probabilities of amino acid residues. The magnitude of the change observed in the midpoint of the thermal transitions suggests that the effect of single amino acid replacements on helix formation should be experimentally measurable.
journal_name
Biochemistryjournal_title
Biochemistryauthors
Merutka G,Stellwagen Edoi
10.1021/bi00427a048subject
Has Abstractpub_date
1989-01-10 00:00:00pages
352-7issue
1eissn
0006-2960issn
1520-4995journal_volume
28pub_type
杂志文章相关文献
BIOCHEMISTRY文献大全abstract::Much interest is currently focused on understanding the detailed contribution that particular amino acid residues make in protein structure and function. Although the use of site-directed mutagenesis has greatly contributed to this goal, the approach is limited to the standard repertoire of twenty amino acids. Fluorin...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9617973
更新日期:1997-03-18 00:00:00
abstract::N-Linked sugar chains were liberated by hydrazinolysis from porcine zona pellucida glycoproteins obtained from ovarian follicular oocytes. Neutral sugar chains were separated from acidic ones by paper electrophoresis and fractionated with a serial lectin column chromatography and Bio-Gel P-4 column chromatography. The...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00222a012
更新日期:1991-02-26 00:00:00
abstract::The electron spin resonance (ESR) spectra from spin-labeled phospholipids in recombinants of myelin proteolipid apoprotein with dimyristoylphosphatidylcholine have been simulated with the exchanged-coupled Bloch equations to obtain values for both the fraction of motionally restricted lipids and the exchange rate betw...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00401a009
更新日期:1988-01-12 00:00:00
abstract::The leech carboxypeptidase inhibitor (LCI) is a 66-amino acid protein, containing four disulfides that stabilize its structure. This polypeptide represents an excellent model for the study and understanding of the diversity of folding pathways in small, cysteine-rich proteins. The pathway of oxidative folding of LCI h...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi034308p
更新日期:2003-06-10 00:00:00
abstract::The unique structural properties of the ferritin protein cages have provided impetus to focus on the methodical study of these self-assembling nanosystems. Among these proteins, Escherichia coli bacterioferritin (EcBfr), although architecturally very similar to other members of the family, shows structural instability...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi200207w
更新日期:2011-05-17 00:00:00
abstract::The Gbeta and Ggamma subunit of the heterotrimeric G proteins form a functional dimer that is stable once assembled in vivo or in vitro. The requirements, mechanism, and specificity of dimer formation are still incompletely understood, but represent important biochemical processes involved in the specificity of cellul...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0504254
更新日期:2005-09-06 00:00:00
abstract::Indolicidin is an antimicrobial cationic peptide with broad-spectrum activity isolated from bovine neutrophils. An indolicidin analogue CP-11, ILKKWPWWPWRRK-NH(2), with improved activity against Gram-negative bacteria had increased positive charge and amphipathicity while maintaining the short length of the parent mol...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi035643g
更新日期:2003-12-09 00:00:00
abstract::Unfractionated Escherichia coli tRNA has been aminoacylated with lysine and preferentially acetylated at the epsilon-amino nitrogen of lysine by reaction with N-acetoxysuccinimide. After treatment with peptidyl-tRNA hydrolase, 90% of the aminoacylated tRNA molecules were Nepsilon-acetyl-Lys-tRNA. Post-ribosomal supern...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00648a018
更新日期:1976-02-10 00:00:00
abstract::The solvent accessibility of thrombin in its substrate-free and substrate-bound forms has been compared by amide hydrogen/deuterium (H/(2)H) exchange. The optimized inhibitor peptide dPhe-Pro-Arg chloromethyl ketone (PPACK) was used to simulate the substrate-bound form of thrombin. These studies were motivated by the ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0499718
更新日期:2004-05-11 00:00:00
abstract::Beta-2-microglobulin (beta2m) deposits as amyloid fibrils in the musculoskeletal system of patients undergoing long-term dialysis treatment as a result of kidney failure. Previous work has shown that Cu(II) binding causes beta2m to organize into nativelike dimers and tetramers that precede amyloid formation. Cu(II) is...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi901172y
更新日期:2009-10-20 00:00:00
abstract::The human transferrin receptor (TfR) has three N-linked oligosaccharides. A combination of site-directed mutagenesis and carbohydrate and protein chemistry was used to characterize the structures of the N-linked oligosaccharides and to map their locations. We find that the type of oligosaccharide at each position was ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi962884y
更新日期:1997-04-29 00:00:00
abstract::Specific interactions of human melanocortin-4 receptor (hMC4R) with its nonpeptide and peptide agonists were studied using alanine-scanning mutagenesis. The binding affinities and potencies of two synthetic, small-molecule agonists (THIQ, MB243) were strongly affected by substitutions in transmembrane alpha-helices (T...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0501840
更新日期:2005-08-30 00:00:00
abstract::In this paper the interaction of cytoplasmic CopZ and the N-terminal domain of the CopA ATPase from Bacillus subtilis has been studied by NMR through (15)N-(1)H HSQC experiments in order to understand the role of the two proteins in the whole copper trafficking mechanism of the bacteria. It appears that the two protei...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi027096p
更新日期:2003-02-25 00:00:00
abstract::Four mechanisms for the allosteric regulation of the calcium and magnesium ion activated adenosinetriphosphatase (Ca,Mg-ATPase) of sarcoplasmic reticulum were examined. Negative cooperativity in substrate binding was not supported by 3H-labeled 5'-adenylyl methylenediphosphate (AMPPCP) binding, which was best fit by a...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00341a049
更新日期:1985-09-24 00:00:00
abstract::The R2 protein of ribonucleotide reductase catalyzes the dioxygen-dependent one-electron oxidation of Tyr122 at a diiron-carboxylate site. Methane monooxygenase and related hydroxylases catalyze hydrocarbon hydroxylation at diiron sites structurally related to the one in R2. In protein R2, the likely reaction site for...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9806403
更新日期:1998-07-28 00:00:00
abstract::A pressure-jump apparatus was employed in investigating the kinetics of protein unfolding and refolding. In the reaction cell, the pressure can be increased or decreased by 100-160 bar within 50-100 microseconds and then held constant. Thus, unfolding and refolding reactions in the time range from 70 microseconds to 7...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi982487i
更新日期:1999-03-09 00:00:00
abstract::A novel and efficient enzyme kinetics assay using electrospray ionization mass spectrometry was developed and applied to the bacterial carbohydrate sulfotransferase (NodST). NodST catalyzes the sulfuryl group transfer from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to chitobiose, generating 3'-phosphoadenosine 5'-ph...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi020457g
更新日期:2002-11-05 00:00:00
abstract::Seipin is a transmembrane protein that resides in the endoplasmic reticulum and concentrates at junctions between the ER and cytosolic lipid droplets. Mutations in the human seipin gene, including the missense mutation A212P, lead to congenital generalized lipodystrophy (CGL), characterized by the lack of normal adipo...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi1013003
更新日期:2010-12-21 00:00:00
abstract::In this study, we investigated the role of ubiquitination in the disposition of the inactivated O6-methylguanine-DNA methyltransferase (MGMT) protein in human (HT-29 and CEM) and murine (ts85) tumor cells. Using a combination of immunoprecipitation and immunoblotting techniques with antibodies against ubiquitin and MG...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9518205
更新日期:1996-01-30 00:00:00
abstract::The classical complement pathway, which plays a vital role in preventing infection, is initiated by the action of the serine proteases C1r and C1s. We have examined the hydrolysis of substrates representing cleavage sequences in the physiological substrates for C1s, C2 and C4. These studies showed that the P(1)'-P(4)'...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi035507b
更新日期:2003-12-23 00:00:00
abstract::The unique occurrence of G-quadruplexes in the AT-rich genome of human malaria parasite Plasmodium falciparum provides hints about their critical roles in parasite survival, pathogenesis, and host immune evasion. An intriguing question is whether these noncanonical structures can serve as molecular targets for small m...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/acs.biochem.7b00964
更新日期:2017-12-26 00:00:00
abstract::In an effort to characterize the bimolecular interface between parathyroid hormone (PTH) and its human receptor PTH1-Rc (hPTH1-Rc), we previously identified two contact sites in the receptor: one for position 1 and another for position 13 (located at the ends of the principal activation domain) in PTH(1-34). The prese...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi000195n
更新日期:2000-07-18 00:00:00
abstract::Apolipoprotein B (apoB) is the essential nonexchangeable protein in chylomicrons and very low-density lipoprotein-derived lipoprotein particles, including low-density lipoprotein (LDL). ApoB has been a key target for cardiovascular research because of its essential role in the assembly, secretion, delivery, and recept...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi048286y
更新日期:2005-02-01 00:00:00
abstract::Src homology 2 (SH2) domains are phosphotyrosine- (pY-) binding modules found in a variety of signal-transducing proteins and constitute an important class of drug targets for the treatment of signaling related diseases/conditions. To date, a large number of peptidic as well as nonpeptidic SH2 domain inhibitors have b...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi034076u
更新日期:2003-05-06 00:00:00
abstract::Glutathionylation of intracellular proteins is an established physiological regulator of protein function. In multiple models, including ischemia-reperfusion of the heart, increased oxidative stress results in the glutathionylation of sarcomeric actin. We hypothesized that actin glutathionylation may play a role in th...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi900669m
更新日期:2009-08-11 00:00:00
abstract::For three prokaryotic enzymes of the xanthine oxidase family, namely quinoline 2-oxidoreductase, quinaldine 4-oxidase, and isoquinoline 1-oxidoreductase, the electron transfer centers were investigated by electron paramagnetic resonance. The enzymes are containing a molybdenum-molybdopterin cytosine dinucleotide cofac...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi970581d
更新日期:1997-08-12 00:00:00
abstract::The effects of NH3 on the oxygen evolving enzyme have been investigated with EPR and steady-state O2 evolution. The following results were obtained. At low light intensity O2 evolution occurs in all centers even though ammonia is bound. This binding occurs in the S2 state and results in a modification of the multiline...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00453a003
更新日期:1990-01-09 00:00:00
abstract::Calmodulin (CaM) is a small acidic protein essential to calcium-mediated signal transduction. Conformational change driven by calcium binding controls its selective activation of myriad target proteins. In most well characterized cases, both homologous domains of CaM interact with a target protein. However, physiologi...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0023091
更新日期:2001-01-30 00:00:00
abstract::The specificity of subtilisin BPN' toward substrates with large hydrophobic P4 residues has been improved by single amino acid replacements at positions 104 and 107. Mutations were designed to (i) increase the size of the P4 binding pocket by replacing Ile107, which is at the bottom of the S4 pocket, by Val, Ala, and ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00056a001
更新日期:1993-02-09 00:00:00
abstract::Protein folding in vivo takes place in a highly crowded environment. The resulting excluded volume forces are thought to stabilize folded forms of proteins. In agreement, many in vitro studies have shown that the presence of macromolecular crowding agents increases the stability of folded proteins but often by only a ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi500222g
更新日期:2014-04-15 00:00:00