Microbiome-Metabolomics Analysis Investigating the Impacts of Dietary Starch Types on the Composition and Metabolism of Colonic Microbiota in Finishing Pigs.

abstract：:To date, genes identified and transcriptionally regulated by the AirSR TCS have been involved in energy production and cellular homeostasis of the staphylococcal cell. It is well accepted that the state of cellular metabolism impacts the expression of virulence factors in Staphylococcus aureus. For this reason, we con...

journal_title：Frontiers in microbiology

authors： Hall JW,Yang J,Guo H,Ji Y

更新日期：2015-07-03 00:00:00

abstract：:Cefquinome is a fourth generation cephalosporin with antimicrobial activity against gram negative and gram positive bacterial species, including Staphylococcus aureus. The aim of our study was to observe the ex-vivo activity of cefquinome against Staphylococcus aureus strains by using bovine serum from intravenously t...

journal_title：Frontiers in microbiology

authors： Ahmad I,Hao H,Huang L,Sanders P,Wang X,Chen D,Tao Y,Xie S,Xiuhua K,Li J,Dan W,Yuan Z

更新日期：2015-06-17 00:00:00

abstract：:Crop protection anilinopyrimidine (AP) fungicides were introduced more than 20 years ago for the control of a range of diseases caused by ascomycete plant pathogens, and in particular for the control of gray mold caused by Botrytis cinerea. Although early mode of action studies suggested an inhibition of methionine bi...

journal_title：Frontiers in microbiology

authors： Mosbach A,Edel D,Farmer AD,Widdison S,Barchietto T,Dietrich RA,Corran A,Scalliet G

更新日期：2017-11-30 00:00:00

abstract：:Adequate comparisons of DNA and cDNA libraries from complex environments require methods for co-extraction of DNA and RNA due to the inherent heterogeneity of such samples, or risk bias caused by variations in lysis and extraction efficiencies. Still, there are few methods and kits allowing simultaneous extraction of ...

journal_title：Frontiers in microbiology

authors： Lim NY,Roco CA,Frostegård Å

更新日期：2016-10-18 00:00:00

abstract：:In Belize, shallow populations (10 and 16 m) of the coral species Montastraea cavernosa from the back reef and reef crest are genetically differentiated from deeper populations on the fore reef and reef wall (25 and 35 m). Like many species of scleractinian corals, M. cavernosa has an obligate symbiosis with dinoflage...

journal_title：Frontiers in microbiology

authors： Eckert RJ,Reaume AM,Sturm AB,Studivan MS,Voss JD

更新日期：2020-04-09 00:00:00

abstract：:Hepatitis C virus (HCV) infection involves a variety of viral and host factors, some of which promote the infection process. A small nucleolar RNA, C/D box 126 (SNORD126), was previously shown to be associated with hepatocellular carcinoma (HCC). However, the role of SNORD126 in HCV infection, which is one of the prim...

journal_title：Frontiers in microbiology

authors： Qian X,Xu C,Wu B,Tang H,Zhao P,Qi Z

更新日期：2020-09-15 00:00:00

abstract：:The Streptococcus bovis/Streptococcus equinus complex (SBSEC) comprises several species inhabiting the animal and human gastrointestinal tract (GIT). They match the pathobiont description, are potential zoonotic agents and technological organisms in fermented foods. SBSEC members are associated with multiple diseases ...

journal_title：Frontiers in microbiology

authors： Jans C,Boleij A

更新日期：2018-04-10 00:00:00

abstract：:An ideal DNA polymerase for chain-terminating DNA sequencing should possess the following features: (1) incorporate dideoxy- and other modified nucleotides at an efficiency similar to that of the cognate deoxynucleotides; (2) high processivity; (3) high fidelity in the absence of proofreading/exonuclease activity; and...

journal_title：Frontiers in microbiology

authors： Zhu B

更新日期：2014-04-16 00:00:00

abstract：:Coronavirus disease 2019 (COVID-19), caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus, has emerged as a global pandemic worldwide. In this study, we used ARTIC primers-based amplicon sequencing to profile 225 SARS-CoV-2 genomes from India. Phylogenetic analysis of 202 high-quality assem...

journal_title：Frontiers in microbiology

authors： Raghav S,Ghosh A,Turuk J,Kumar S,Jha A,Madhulika S,Priyadarshini M,Biswas VK,Shyamli PS,Singh B,Singh N,Singh D,Datey A,Avula K,Smita S,Sabat J,Bhattacharya D,Kshatri JS,Vasudevan D,Suryawanshi A,Dash R,Senapati

更新日期：2020-11-23 00:00:00

abstract：:Several Bacillus strains exert beneficial effects on the maintenance of intestinal homeostasis and host health. However, whether Bacillus amyloliquefaciens (BA) can improve gut microbial dysbiosis and ameliorate colitis is unknown. Therefore, we conducted the present study to investigate the effects of BA administrati...

journal_title：Frontiers in microbiology

authors： Cao G,Wang K,Li Z,Tao F,Xu Y,Lan J,Chen G,Yang C

更新日期：2019-01-08 00:00:00

abstract：:Edaphic cyanobacteria and algae have been extensively studied in dryland soils because they play key roles in the formation of biological soil crusts and the stabilization of soil surfaces. Yet, in temperate agricultural crop soils, little is understood about the functional significance of indigenous photosynthetic mi...

journal_title：Frontiers in microbiology

authors： Crouzet O,Consentino L,Pétraud JP,Marrauld C,Aguer JP,Bureau S,Le Bourvellec C,Touloumet L,Bérard A

更新日期：2019-06-14 00:00:00

abstract：:Understanding microbe-microbe interactions is critical to predict microbiome function and to construct communities for desired outcomes. Investigation of these interactions poses a significant challenge due to the lack of suitable experimental tools available. Here we present the microwell recovery array (MRA), a new ...

journal_title：Frontiers in microbiology

authors： Barua N,Herken AM,Stern KR,Reese S,Powers RL,Morrell-Falvey JL,Platt TG,Hansen RR

更新日期：2021-01-05 00:00:00

abstract：:Cellulolytic enzyme hydrolysis of lignocellulose biomass to release fermentable sugars is one of the key steps in biofuel refining. Gene expression of fungal cellulolytic enzymes is tightly controlled at the transcriptional level. Key transcription factors such as activator ClrB/CLR2 and XlnR/XYR1, as well as represso...

journal_title：Frontiers in microbiology

authors： Li Y,Zheng X,Zhang X,Bao L,Zhu Y,Qu Y,Zhao J,Qin Y

更新日期：2016-12-22 00:00:00

abstract：:Due to Earth's changing climate, the ongoing and foreseeable spreading of mycotoxigenic Aspergillus species has increased the possibility of mycotoxin contamination in the feed and food production chain. These harmful mycotoxins have aroused serious health and economic problems since their first appearance. The most p...

journal_title：Frontiers in microbiology

authors： Ráduly Z,Szabó L,Madar A,Pócsi I,Csernoch L

更新日期：2020-01-09 00:00:00

abstract：:Carbapenem-resistant Acinetobacter baumannii (CRAB) are emerging worldwide. In South America, clinical isolates presenting such a phenotype usually do not belong to the globally distributed international clone 2 (IC2). The majority of these isolates are also resistant to multiple other antimicrobials and are often des...

journal_title：Frontiers in microbiology

authors： Nodari CS,Cayô R,Streling AP,Lei F,Wille J,Almeida MS,de Paula AI,Pignatari ACC,Seifert H,Higgins PG,Gales AC

更新日期：2020-11-30 00:00:00

abstract：:The objective of this study was to investigate the ability of a culture highly enriched with the polyphosphate-accumulating organism, "Candidatus Accumulibacter phosphatis" clade IIC, to adjust their metabolism to different phosphate availabilities. For this purpose the biomass was cultivated in a sequencing batch rea...

journal_title：Frontiers in microbiology

authors： Welles L,Abbas B,Sorokin DY,Lopez-Vazquez CM,Hooijmans CM,van Loosdrecht MC,Brdjanovic D

更新日期：2017-01-05 00:00:00

abstract：:The aqueous leaf extract of Jatropha curcas was used for the synthesis of silver nanoparticles (Jc-AgNps) which were further evaluated for its antibacterial potential against food borne pathogens. J. curcas leaf extract could synthesize stable silver nanoparticles (Zeta potential: -23.4 mV) with absorption band at 430...

journal_title：Frontiers in microbiology

authors： Chauhan N,Tyagi AK,Kumar P,Malik A

更新日期：2016-11-08 00:00:00

abstract：:The cucurbit vegetables, including cucumbers, melons and pumpkins, have been cultivated for thousands of years without fungicides. However, their seed germination stage is prone to be infected by soil-borne fungal and oomycete pathogens. Endophytes are symbionts that reside inside plant tissues including seeds. Seed e...

journal_title：Frontiers in microbiology

authors： Khalaf EM,Raizada MN

更新日期：2018-02-05 00:00:00

abstract：:We present the details of a numerical model, BIOB that is capable of simulating the biodegradation of oil entrapped in the sediment. The model uses Monod kinetics to simulate the growth of bacteria in the presence of nutrients and the subsequent consumption of hydrocarbons. The model was used to simulate experimental ...

journal_title：Frontiers in microbiology

authors： Torlapati J,Boufadel MC

更新日期：2014-05-14 00:00:00

abstract：:The synthesis of phospholipids relies on a sort of genes, whose promoter regions contain inositol-sensitive upstream activation sequence (UASINO) and are regulated by the basic helix-loop-helix (bHLH)-type ino2/ino4 transcription factor (TF) pair. Ten putative bHLH TFs have been found through whole genome sequencing o...

journal_title：Frontiers in microbiology

authors： Dong H,Yu D,Wang B,Pan L

更新日期：2020-01-09 00:00:00

abstract：:To date, nuclear localization signals (NLSs) that target proteins to nuclei in oomycetes have not been defined, but have been assumed to be the same as in higher eukaryotes. Here, we use the soybean pathogen Phytophthora sojae as a model to investigate these sequences in oomycetes. By establishing a reliable in vivo N...

journal_title：Frontiers in microbiology

authors： Fang Y,Jang HS,Watson GW,Wellappili DP,Tyler BM

更新日期：2017-02-02 00:00:00

abstract：:Over the last years the role of fungal endophytes in plant biology has been extensively studied. A number of species were shown to positively affect plant growth and fitness, thus attempts have been made to utilize these microorganisms in agriculture and phytoremediation. Plant-fungi symbiosis requires multiple metabo...

journal_title：Frontiers in microbiology

authors： Rozpądek P,Domka AM,Nosek M,Ważny R,Jędrzejczyk RJ,Wiciarz M,Turnau K

更新日期：2018-03-19 00:00:00

abstract：:Listeria monocytogenes (Lm) is a common environmental bacterium that thrives on vegetation and soil matter, but can infect humans if contaminated food products are ingested, resulting in severe disease in immunosuppressed populations, including pregnant women and newborns. To better understand how the unique immunolog...

journal_title：Frontiers in microbiology

authors： Wolfe B,Kerr AR,Mejia A,Simmons HA,Czuprynski CJ,Golos TG

更新日期：2019-09-11 00:00:00

abstract：:Campylobacter concisus is a bacterium that is associated with inflammatory bowel disease (IBD). Immunosuppressive drugs including azathioprine (AZA) and mercaptopurine (MP), and anti-inflammatory drug such as 5-aminosalicylic acid (5-ASA) are commonly used to treat patients with IBD. This study aimed to examine the ef...

journal_title：Frontiers in microbiology

authors： Liu F,Ma R,Riordan SM,Grimm MC,Liu L,Wang Y,Zhang L

更新日期：2017-03-29 00:00:00

abstract：:Photorhabdus luminescens TTO1 and Xenorhabdus nematophila HGB081 are insect pathogenic bacteria and producers of various structurally diverse bioactive natural products. In these entomopathogenic bacteria we investigated the role of the global regulators Lrp, LeuO, and HexA in the production of natural products. Lrp i...

journal_title：Frontiers in microbiology

authors： Engel Y,Windhorst C,Lu X,Goodrich-Blair H,Bode HB

更新日期：2017-02-17 00:00:00

abstract：:This study was conducted to compare the microbiome and metabolome differences in the colon lumen from two pig breeds with different genetic backgrounds. Fourteen weaned piglets at 30 days of age, including seven Landrace piglets (a lean-type pig breed with a fast growth rate) and seven Meihua piglets (a fatty-type Chi...

journal_title：Frontiers in microbiology

authors： Yan S,Zhu C,Yu T,Huang W,Huang J,Kong Q,Shi J,Chen Z,Liu Q,Wang S,Jiang Z,Chen Z

更新日期：2017-09-21 00:00:00

abstract：:Recent research has proven the ability of cold atmospheric plasma (CAP) for assuring food safety. A more flexible and transportable alternative is the use of plasma activated liquids (PAL), which are also known to have antimicrobial properties. However, within the context of food safety, little is known on its potenti...

journal_title：Frontiers in microbiology

authors： Smet C,Govaert M,Kyrylenko A,Easdani M,Walsh JL,Van Impe JF

更新日期：2019-07-04 00:00:00

abstract：:In this study, we investigated the transcriptional response to 50 Hz extremely low frequency electromagnetic field (ELF-EMF) and 2.0 GHz radio frequency electromagnetic field (RF-EMF) exposure by Illumina sequencing technology using budding yeast as the model organism. The transcription levels of 28 genes were upregul...

journal_title：Frontiers in microbiology

authors： Lin KW,Yang CJ,Lian HY,Cai P

更新日期：2016-08-31 00:00:00

abstract：:Microbial contamination has been a pervasive issue during the rice storage and triggers extensive researches. The metabolism of microorganisms was proved as an indicator to mirror the degree of microbial contamination. It is necessary to develop a scientific method to analyze the metabolism of rice microbial communiti...

journal_title：Frontiers in microbiology

authors： Ge Z,Du H,Gao Y,Qiu W

更新日期：2018-07-03 00:00:00

abstract：:Coronavirus (CoV) envelope (E) protein is a small structural protein critical for virion morphogenesis and release. The recently characterized E protein ion channel activity (EIC) has also been implicated in modulating viral pathogenesis. In this study, we used infectious bronchitis coronavirus (IBV) as a model to stu...

journal_title：Frontiers in microbiology

authors： Li S,Yuan L,Dai G,Chen RA,Liu DX,Fung TS

更新日期：2020-01-24 00:00:00