Diversity of Tilletiopsis-Like Fungi in Exobasidiomycetes (Ustilaginomycotina) and Description of Six Novel Species.

abstract：:Flow cytometric analysis is a reliable and convenient method for investigating molecules at the single cell level. Previously, recombinant human immunodeficiency virus type 1 (HIV-1) strains were constructed that express a fluorescent reporter, either enhanced green fluorescent protein, or DsRed, which allow the monit...

journal_title：Frontiers in microbiology

authors： Terahara K,Yamamoto T,Mitsuki YY,Shibusawa K,Ishige M,Mizukoshi F,Kobayashi K,Tsunetsugu-Yokota Y

更新日期：2012-01-10 00:00:00

abstract：:The establishment of human gut microbiota commences initially in utero. Meconium-the first fecal material passed after birth-can be used to study fetal gut contents; however, processing meconium samples for microbiome studies presents significant technical challenges. Meconium hosts a low biomass microbiome, is tar-li...

journal_title：Frontiers in microbiology

authors： Stinson LF,Keelan JA,Payne MS

更新日期：2018-02-20 00:00:00

abstract：:Colistin-resistance mediated by mobilisable and plasmid-borne mcr genes has emerged worldwide, threatening the efficacy of colistin, a last resort antibiotic increasingly used for treating human invasive infections by multidrug-resistant or extensively drug-resistant Enterobacteriaceae. In this study, we report the fi...

journal_title：Frontiers in microbiology

authors： Carfora V,Alba P,Leekitcharoenphon P,Ballarò D,Cordaro G,Di Matteo P,Donati V,Ianzano A,Iurescia M,Stravino F,Tagliaferri T,Battisti A,Franco A

更新日期：2018-08-17 00:00:00

abstract：:Penicillium digitatum is the most damaging pathogen provoking green mold in citrus fruit during storage, and there is an urgent need for novel antifungal agents with high efficiency. The aim of this study was to investigate the antifungal effects of peptide thanatin against P. digitatum and the molecular mechanisms. R...

journal_title：Frontiers in microbiology

authors： Feng G,Li X,Wang W,Deng L,Zeng K

更新日期：2020-12-14 00:00:00

abstract：:Kaposi's sarcoma-associated herpesvirus (KSHV), also called human herpesvirus 8, belongs to the gamma herpesviruses and is the etiological agent of Kaposi's sarcoma, primary effusion lymphoma, and some types of multicentric Castleman's disease. In vivo, KSHV mainly infects B cells and endothelial cells. The interactio...

journal_title：Frontiers in microbiology

authors： Liang D,Lin X,Lan K

更新日期：2012-01-11 00:00:00

abstract：:Botrytis cinerea is an important plant pathogenic fungus with a wide range of host. It usually produces black-colored sclerotia (BS) due to deposition of 1,8-dihydroxynaphthalene melanin in sclerotial melanogenesis. Our previous study (Zhou et al., 2018) reported six B. cinerea isolates producing orange-colored sclero...

journal_title：Frontiers in microbiology

authors： Zhou Y,Yang L,Wu M,Chen W,Li G,Zhang J

更新日期：2017-12-12 00:00:00

abstract：:Low moisture content ready-to-eat foods vended in Nigerian markets could be pre-packaged or packaged at point of sale. These foods are widely and frequently consumed across Nigeria as quick foods. Despite their importance in the daily diets of Nigerians, a comprehensive study on the diversity of fungi, fungal metaboli...

journal_title：Frontiers in microbiology

authors： Ezekiel CN,Oyedele OA,Kraak B,Ayeni KI,Sulyok M,Houbraken J,Krska R

更新日期：2020-04-09 00:00:00

abstract：:Outbreaks of foodborne illnesses linked to fresh fruits and vegetables have been key drivers behind a wide breadth of research aiming to fill data gaps in our understanding of the total ecology of agricultural water sources such as ponds and wells and the relationship of this ecology to foodborne pathogens such as Sal...

journal_title：Frontiers in microbiology

authors： Gu G,Strawn LK,Ottesen AR,Ramachandran P,Reed EA,Zheng J,Boyer RR,Rideout SL

更新日期：2021-01-08 00:00:00

abstract：:The Gram-positive anaerobic human pathogenic bacterium Atopobium vaginae causes most diagnosed cases of bacterial vaginosis as well as opportunistic infections in immunocompromised patients. In addition to its well-established role in carbohydrate metabolism, D-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Str...

journal_title：Frontiers in microbiology

authors： Querol-García J,Fernández FJ,Marin AV,Gómez S,Fullà D,Melchor-Tafur C,Franco-Hidalgo V,Albertí S,Juanhuix J,Rodríguez de Córdoba S,Regueiro JR,Vega MC

更新日期：2017-04-10 00:00:00

abstract：:Human urine was considered sterile for a long time. However, 416 species have been previously cultured, including only 40 anaerobic species. Here, we used culturomics, particularly those targeting anaerobes, to better understand the urinary microbiota. By testing 435 urine samples, we isolated 450 different bacterial ...

journal_title：Frontiers in microbiology

authors： Dubourg G,Morand A,Mekhalif F,Godefroy R,Corthier A,Yacouba A,Diakite A,Cornu F,Cresci M,Brahimi S,Caputo A,Lechevallier E,Tsimaratos M,Moal V,Lagier JC,Raoult D

更新日期：2020-10-16 00:00:00

abstract：:Highly pathogenic H5N1 avian influenza virus (A/H5N1) of clade 2.2.1 is endemic in poultry in Egypt where the highest number of human infections worldwide was reported. During the last 12 years the Egyptian A/H5N1 evolved into several genotypes. In 2007-2014 vaccinated poultry suffered from antigenic drift variants of...

journal_title：Frontiers in microbiology

authors： Salaheldin AH,Kasbohm E,El-Naggar H,Ulrich R,Scheibner D,Gischke M,Hassan MK,Arafa AA,Hassan WM,Abd El-Hamid HS,Hafez HM,Veits J,Mettenleiter TC,Abdelwhab EM

更新日期：2018-03-27 00:00:00

abstract：:Despite recent recognition of the ATP-binding cassette protein OptrA as an important mediator of linezolid resistance in Enterococcus faecalis worldwide, the mechanisms of optrA gene acquisition and transfer remain poorly understood. In this study, we performed comprehensive molecular and phenotypic profiling of 44 op...

journal_title：Frontiers in microbiology

authors： Zou J,Tang Z,Yan J,Liu H,Chen Y,Zhang D,Zhao J,Tang Y,Zhang J,Xia Y

更新日期：2020-06-04 00:00:00

abstract：:Research in the deep terrestrial biosphere is driven by interest in novel biodiversity and metabolisms, biogeochemical cycling, and the impact of human activities on this ecosystem. As this interest continues to grow, it is important to ensure that when subsurface investigations are proposed, materials recovered from ...

journal_title：Frontiers in microbiology

authors： Wilkins MJ,Daly RA,Mouser PJ,Trexler R,Sharma S,Cole DR,Wrighton KC,Biddle JF,Denis EH,Fredrickson JK,Kieft TL,Onstott TC,Peterson L,Pfiffner SM,Phelps TJ,Schrenk MO

更新日期：2014-09-12 00:00:00

abstract：:The effects of environmental and dispersal processes on macrofungi community assembly remain unclear. Further, it is not well understood if community assembly differs for different functional guilds of macrofungi, e.g., soil and rotten-wood macrofungi. In this study, using 2433 macrofungi sporocarps belonging to 217 s...

journal_title：Frontiers in microbiology

authors： Chen Y,Svenning JC,Wang X,Cao R,Yuan Z,Ye Y

更新日期：2018-01-23 00:00:00

abstract：:Elucidating the succession of soil microbial communities and microbial functions at key plant growth stages is a major goal of microbial ecology research. In this study, we investigated the succession of soil bacteria during four fertilizer treatments (control, NPK, NPK + pig manure, and NPK + straw) and at three cruc...

journal_title：Frontiers in microbiology

authors： Wang W,Luo X,Chen Y,Ye X,Wang H,Cao Z,Ran W,Cui Z

更新日期：2019-03-11 00:00:00

abstract：:Background:Tyrophagus putrescentiae is a ubiquitous mite species in soil, stored products and house dust and infests food and causes allergies in people. T. putrescentiae populations harbor different bacterial communities, including intracellular symbionts and gut bacteria. The spread of microorganisms via the fecal p...

journal_title：Frontiers in microbiology

authors： Hubert J,Nesvorna M,Sopko B,Smrz J,Klimov P,Erban T

更新日期：2018-10-30 00:00:00

abstract：:After the discovery of ANaerobic AMMonium OXidation (anammox) in the environment, the role of heterotrophic denitrification as the main marine pathway for fixed N loss has been questioned. A 3 part, 15 month time series investigating nitrite reductase (nirS) mRNA transcripts at a single location in the Black Sea was c...

journal_title：Frontiers in microbiology

authors： Kirkpatrick JB,Fuchsman CA,Yakushev E,Staley JT,Murray JW

更新日期：2012-07-19 00:00:00

abstract：:Sulfoquinovose (SQ, 6-deoxy-6-sulfoglucose) is produced by plants and other phototrophs and its biodegradation is a relevant component of the biogeochemical carbon and sulfur cycles. SQ is known to be degraded by aerobic bacterial consortia in two tiers via C3-organosulfonates as transient intermediates to CO2, water ...

journal_title：Frontiers in microbiology

authors： Burrichter A,Denger K,Franchini P,Huhn T,Müller N,Spiteller D,Schleheck D

更新日期：2018-11-27 00:00:00

abstract：:Currently microorganisms are best identified using 16S rRNA and 18S rRNA gene sequencing. However, in recent years matrix assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) has emerged as a potential tool for microbial identification and diagnosis. During the MALDI-TOF MS process, mic...

journal_title：Frontiers in microbiology

authors： Singhal N,Kumar M,Kanaujia PK,Virdi JS

更新日期：2015-08-05 00:00:00

abstract：:There is increasing evidence that volatile organic compounds (VOCs) play an important role in the interactions between fungi and bacteria, two major groups of soil inhabiting microorganisms. Yet, most of the research has been focused on effects of bacterial volatiles on suppression of plant pathogenic fungi whereas li...

journal_title：Frontiers in microbiology

authors： Schmidt R,Etalo DW,de Jager V,Gerards S,Zweers H,de Boer W,Garbeva P

更新日期：2016-01-05 00:00:00

abstract：:The rise of antibiotic resistance is not only a challenge for human and animal health treatments, but is also posing the risk of spreading among bacterial populations in foodstuffs. Farmed fish-related foodstuffs, the food of animal origin most consumed worldwide, are suspected to be a reservoir of antibiotic resistan...

journal_title：Frontiers in microbiology

authors： Helsens N,Calvez S,Prevost H,Bouju-Albert A,Maillet A,Rossero A,Hurtaud-Pessel D,Zagorec M,Magras C

更新日期：2020-12-03 00:00:00

abstract：:Bacterial secondary metabolites possess a wide range of biologically active compounds including antibacterial and antioxidants. In this study, a Gram-positive novel marine Actinobacteria was isolated from sea sediment which showed 84% 16S rRNA gene sequence (KT588655) similarity with Streptomyces variabilis (EU841661)...

journal_title：Frontiers in microbiology

authors： Dholakiya RN,Kumar R,Mishra A,Mody KH,Jha B

更新日期：2017-12-07 00:00:00

abstract：:Bovine babesiosis is a tick-transmitted disease caused by different species of Babesia. The white yak is a unique yak breed that lives only in Tianzhu in the Tibetan Autonomous County, Gansu Province, in northwestern China. Previous research using the ELISA method has confirmed that the white yak could become infected...

journal_title：Frontiers in microbiology

authors： Liu J,Guan G,Li Y,Liu A,Luo J,Yin H

更新日期：2017-03-14 00:00:00

abstract：:Previous studies had suggested the presence of ammonium oxidizing Thaumarchaeota as well as nitrite oxidizing Bacteria in the subsurface spring called Franz Josef Quelle (FJQ), a slightly radioactive thermal mineral spring with a temperature of 43.6-47°C near the alpine village of Bad Gastein, Austria. The microbiolog...

journal_title：Frontiers in microbiology

authors： Gerbl FW,Weidler GW,Wanek W,Erhardt A,Stan-Lotter H

更新日期：2014-05-16 00:00:00

abstract：:Sulfate-reducing prokaryotes (SRP) are ubiquitous and quantitatively important members in many ecosystems, especially in marine sediments. However their abundance and diversity in subsurface marine sediments is poorly understood. In this study, the abundance and diversity of the functional genes for the enzymes adenos...

journal_title：Frontiers in microbiology

authors： Blazejak A,Schippers A

更新日期：2011-12-22 00:00:00

abstract：:Human endogenous retroviruses (ERVs) have been found to be associated with different diseases, e.g., multiple sclerosis (MS). Most human ERVs integrated in our genome are not competent to replicate and these sequences are presumably silent. However, transcription of human ERVs can be reactivated, e.g., by hypoxia. Int...

journal_title：Frontiers in microbiology

authors： Brütting C,Narasimhan H,Hoffmann F,Kornhuber ME,Staege MS,Emmer A

更新日期：2018-02-21 00:00:00

abstract：:Combatting antimicrobial resistant (AMR) using a One-Health approach is essential as various bacteria, including Escherichia coli, a common bacteria, are becoming increasingly resistant and livestock may be a reservoir. The AMR gene content of 492 E. coli, isolated from 56 pig farms across Great Britain in 2014-2015, ...

journal_title：Frontiers in microbiology

authors： AbuOun M,O'Connor HM,Stubberfield EJ,Nunez-Garcia J,Sayers E,Crook DW,Smith RP,Anjum MF

更新日期：2020-05-25 00:00:00

abstract：:IncI-complex plasmids can be divided into seven subgroups IncI1, IncI2, IncIγ, IncB/O, IncK1, IncK2, and IncZ. In this study, a replicon-based scheme was proposed for typing IncI-complex plasmids into four separately clustering subgroups IncI2, IncI1/B/O, IncIγ/K1 and IncK2/Z, the last three of which were combined fro...

journal_title：Frontiers in microbiology

authors： Zhang D,Zhao Y,Feng J,Hu L,Jiang X,Zhan Z,Yang H,Yang W,Gao B,Wang J,Li J,Yin Z,Zhou D

更新日期：2019-01-29 00:00:00

abstract：:Salmonella enterica serovars have been isolated from Colombian broilers and broiler meat. The aim of this study was to investigate the diversity of ESBL/pAmpC genes in extended-spectrum cephalosporin resistant Salmonella enterica and the phylogeny of ESBL/pAmpC-carrying Salmonella using Whole Genome Sequencing (WGS). ...

journal_title：Frontiers in microbiology

authors： Castellanos LR,van der Graaf-van Bloois L,Donado-Godoy P,León M,Clavijo V,Arévalo A,Bernal JF,Mevius DJ,Wagenaar JA,Zomer A,Hordijk J

更新日期：2018-10-26 00:00:00

abstract：:Bacteriophages (phages) are bacterial viruses that parasitize bacteria. They are highly prevalent in nature, with an estimated 1031 viral particles in the whole biosphere, and they outnumber bacteria by at least 10-fold. Hence, phages represent important drivers of bacterial evolution, although our knowledge of the ro...

journal_title：Frontiers in microbiology

authors： Fortier LC

更新日期：2018-08-31 00:00:00