Fluorescence reporting of G-quadruplex structures and modulating their DNAzyme activity using polyethylenimine-pyrene conjugate.

Abstract:

:Four-stranded G-quadruplex structure is one of the most important non-canonical secondary structures of DNA formed by guanine (G)-rich sequences. G-rich DNA sequences are known to occur in the human genome, especially in the telomere 3' end and in oncogene promoters such as c-MYC and c-KIT. In this context, we designed pyrene-conjugated polyethylenimine (PEI-Py) as a fluorescence reporter for the recognition and detection of G-quadruplex structures of G-rich deoxyoligonucleotides and human telomere and gene promoter sequences, under ambient conditions. PEI-Py exhibited prominent pyrene excimer emission in the presence of G-quadruplex structures of G-rich deoxyoligonucleotides and biologically relevant DNA sequences. PEI-Py further displayed the modulation of DNAzyme activity of various G-quadruplex structures in the presence of hemin and hydrogen peroxide.

journal_name

Bioorg Med Chem Lett

authors

Narayanaswamy N,Unnikrishnan M,Gupta M,Govindaraju T

doi

10.1016/j.bmcl.2015.04.012

subject

Has Abstract

pub_date

2015-06-01 00:00:00

pages

2395-400

issue

11

eissn

0960-894X

issn

1464-3405

pii

S0960-894X(15)00323-6

journal_volume

25

pub_type

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