Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa.

Abstract:

:I discuss how different feeding modes and related cellular structures map onto the eukaryote evolutionary tree. Centrally important for understanding eukaryotic cell diversity are Loukozoa: ancestrally biciliate phagotrophic protozoa possessing a posterior cilium and ventral feeding groove into which ciliary currents direct prey. I revise their classification by including all anaerobic Metamonada as a subphylum and adding Tsukubamonas. Loukozoa, often with ciliary vanes, are probably ancestral to all protozoan phyla except Euglenozoa and Percolozoa and indirectly to kingdoms Animalia, Fungi, Plantae, and Chromista. I make a new protozoan phylum Sulcozoa comprising subphyla Apusozoa (Apusomonadida, Breviatea) and Varisulca (Diphyllatea; Planomonadida, Discocelida, Mantamonadida; Rigifilida). Understanding sulcozoan evolution clarifies the origins from them of opisthokonts (animals, fungi, Choanozoa) and Amoebozoa, and their evolutionary novelties; Sulcozoa and their descendants (collectively called podiates) arguably arose from Loukozoa by evolving posterior ciliary gliding and pseudopodia in their ventral groove. I explain subsequent independent cytoskeletal modifications, accompanying further shifts in feeding mode, that generated Amoebozoa, Choanozoa, and fungi. I revise classifications of Choanozoa, Conosa (Amoebozoa), and basal fungal phylum Archemycota. I use Choanozoa, Sulcozoa, Loukozoa, and Archemycota to emphasize the need for simply classifying ancestral (paraphyletic) groups and illustrate advantages of this for understanding step-wise phylogenetic advances.

journal_name

Eur J Protistol

authors

Cavalier-Smith T

doi

10.1016/j.ejop.2012.06.001

subject

Has Abstract

pub_date

2013-05-01 00:00:00

pages

115-78

issue

2

eissn

0932-4739

issn

1618-0429

pii

S0932-4739(12)00050-8

journal_volume

49

pub_type

杂志文章,评审
  • Evidence for two different morphotypes of Difflugia tuberspinifera from China.

    abstract::Difflugia is a morphologically diverse genus of testate amoebae, which are common components of freshwater ecosystems. We observed a new morphotype similar to Difflugia tuberspinifera but without spine in four Xiamen reservoirs, Fujian Province, southeast China. We investigated its morphology and biometry using light ...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2013.12.003

    authors: Yu Z,Zhang W,Liu L,Yang J

    更新日期:2014-04-01 00:00:00

  • Form variation in Puytoracia bergeri Bonnet and a description of P. bonneti n. sp. (Rhizopoda, Filosea).

    abstract::Since its description 35 years ago from Quebec, Canada, the poorly known monospecific testate rhizopod genus Puytoracia (type species, Puytoracia bergeri) has been reported only from the Himalayan region of Nepal. This species was recently found at 13 locations in Ontario, Canada, and the range of form variation of th...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2006.04.002

    authors: Nicholls KH

    更新日期:2006-09-01 00:00:00

  • Use of nile red as a rapid measure of lipid content in ciliates.

    abstract::We report the use of nile red as a rapid and inexpensive method to estimate cellular lipids in three species of Paramecium and in Tetrahymena by the direct application of the dye to living or fixed cells without extraction and purification. Qualitative estimates of the relative changes in the lipid content of cells of...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80129-X

    authors: Cole TA,Fok AK,Ueno MS,Allen RD

    更新日期:1990-06-29 00:00:00

  • Infraciliature and silverline system of the ciliate Pseudotrachelocerca trepida (Kahl, 1928), nov. gen., nov. comb., and establishment of a new family, the pseudotrachelocercidae nov. fam. (Ciliophora, Haptoria).

    abstract::The morphology, infraciliature and silverline system of Trachelocerca trepida Kahl, 1928 has been reinvestigated. The species was found in marine water (Yellow Sea) near Shanghai, Eastchina. Stained specimens (protargol) are characterized morphometrically. The shape of the extrusomes (toxicysts) and the structure of o...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80110-0

    authors: Song W

    更新日期:1990-10-19 00:00:00

  • Relationships between environmental conditions and the morphological variability of planktonic testate amoeba in four neotropical floodplains.

    abstract::Planktonic testate amoebae in floodplains exhibit a broad-range of morphological variability. The variation size is already known, but it is necessary to know how this is for morphological variables. This study aimed to identify the relationships between testate amoebae morphology and environmental factors in four neo...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2016.08.006

    authors: Arrieira RL,Schwind LT,Joko CY,Alves GM,Velho LF,Lansac-Tôha FA

    更新日期:2016-10-01 00:00:00

  • A molecular phylogenetic investigation of Pseudoamphisiella and Parabirojimia (Protozoa, Ciliophora, Spirotrichea), two genera with ambiguous systematic positions.

    abstract::The gene coding for the small subunit ribosomal RNA molecule was sequenced in three marine spirotrichs: Pseudoamphisiella lacazei, P. alveolata, and Parabirojimia similis, the systematic positions of which remain unclear in spite of recent progress. Phylogenetic trees were constructed by means of neighbor-joining (NJ)...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2007.08.002

    authors: Yi Z,Song W,Warren A,Roberts DM,Al-Rasheid KA,Chen Z,Al-Farraj SA,Hu X

    更新日期:2008-02-01 00:00:00

  • Cotterillia bromelicola nov. gen., nov. spec., a gonostomatid ciliate (Ciliophora, Hypotricha) from tank bromeliads (Bromeliaceae) with de novo originating dorsal kineties.

    abstract::Cotterillia bromelicola nov. gen., nov. spec. was discovered in the tanks of the Mexican bromeliad Tillandsia heterophylla. Its morphology, ontogenesis, and 18S rDNA were studied with standard methods. Cotterillia has many cirral rows on both sides of the body. Uniquely, and thus used to diagnose the new genus Cotteri...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2010.08.003

    authors: Foissner W,Stoeck T

    更新日期:2011-01-01 00:00:00

  • A huge diversity of metopids (Ciliophora, Armophorea) in soil from the Murray River floodplain, Australia. III. Morphology, ontogenesis and conjugation of Metopus boletus nov. spec., with implications for the phylogeny of the SAL supercluster.

    abstract::The morphology, ontogenesis, conjugation, and phylogenetic position of Metopus boletus nov. spec. were studied using live observation, various silver impregnation methods, scanning electron microscopy, morphometry, and the 18S rRNA gene sequence. The new species is outstanding in having a mushroom-like appearance; a g...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2019.04.002

    authors: Vďačný P,Foissner W

    更新日期:2019-06-01 00:00:00

  • Redescription of Licnophora chattoni Villeneuve-Brachon, 1939 (Ciliophora, Spirotrichea), associated with Zyzzyzus warreni Calder, 1988 (Cnidaria, Hydrozoa).

    abstract::Licnophora chattoni, found in association with Zyzzyzus warreni, a tubulariid hydroid epizoic in sponges from São Sebastião (SP, Brazil), is redescribed and illustrated using light and electron microscopy. The ciliate has a flexible, transparent body formed by an oval anterior region linked to the posterior basal disc...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2011.07.004

    authors: da Silva-Neto ID,da Silva Paiva T,Pedroso Dias RJ,Alexandre Campos CJ,Migotto AE

    更新日期:2012-01-01 00:00:00

  • Cyclidium porcatum n. sp.: a Free-living anaerobic scuticociliate containing a stable complex of hydrogenosomes, eubacteria and archaeobacteria.

    abstract::A new ciliate species (Cyclidium porcatum) is the first freshwater anaerobic scuticociliate to be cultured and described. It contains a unique tripartite structure consisting of hydrogenosomes (confirmed by cytochemical staining for hydrogenase), interspersed with methanogens (confirmed by auto fluorescence and in sit...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80281-6

    authors: Clarke KJ,Finlay BJ,Esteban G,Guhl BE,Embley TM

    更新日期:1993-05-28 00:00:00

  • Resting cysts of Parentocirrus hortualis Voß, 1997 (Ciliophora, Hypotrichia), with preliminary notes on encystation and various types of excystation.

    abstract::Resting cysts of Parentocirrus hortualis were investigated, using live observation, SEM and TEM. Processes during encystation and excystation were observed in vivo under the light microscope. During encystation, the trophic body becomes globular, the ciliature is resorbed in an anterior direction, the macronuclear nod...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2015.12.003

    authors: Benčaťová S,Tirjaková E,Vďačný P

    更新日期:2016-04-01 00:00:00

  • Rediagnoses of closely related pigmented marine species of the genus Pseudokeronopsis (ciliophora, hypotrichida).

    abstract::The morphology and the infraciliature of Pseudokeronopsis rubra [7, 10, 11], P. carnea [8] nov. comb, and P. flava [8] nov. comb, are redescribed using protargol silver staining, biometry, and chromatography. These species differ in the colour and composition of the pigment granules, the length of the midventral rows,...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(87)80010-X

    authors: Wirnsberger E,Larsen HF,Uhlig G

    更新日期:1987-11-01 00:00:00

  • Pterospora demodendrion sp.nov. and Pterospora clymenellae, acephaline eugregarines from coastal North Carolina.

    abstract::Pterospora demodendrion sp.nov., an acephaline eugregarine (Eugregarinorida, Urosporidae) from the coelom of Axiothella mucosa (Polychaeta, Maldanidae) is described. The gamont averages 277 × 139 μm and possesses 20-36 posterior prolongations. Gametocysts average 412 × 287 μm; without polar funneled openings. Oocysts ...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80427-X

    authors: Landers SC

    更新日期:1991-03-28 00:00:00

  • A hydrothermal vent mite (Halacaridae, Acari) with a new Corynophrya species (Suctoria, Ciliophora), description of the suctorian and its distribution on the halacarid mite.

    abstract::Copidognathus nautilei Bartsch, 1997, from a hydrothermal vent field of the Mid-Atlantic Ridge at about 13 degrees N, 45 degrees W and 4090 m depth, was infested with the suctorian Corynophrya abyssalis n. sp., with up to 58 epizoans per mite. The new suctorian has a sacciform body with seven longitudinal ribs, a comp...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2010.02.001

    authors: Bartsch I,Dovgal IV

    更新日期:2010-08-01 00:00:00

  • Nuclear 28S rDNA phylogeny supports the basal placement of Noctiluca scintillans (Dinophyceae; Noctilucales) in dinoflagellates.

    abstract::Noctiluca scintillans (Macartney) Kofoid et Swezy, 1921 is an unarmoured heterotrophic dinoflagellate with a global distribution, and has been considered as one of the ancestral taxa among dinoflagellates. Recently, 18S rDNA, actin, alpha-, beta-tubulin, and Hsp90-based phylogenies have shown the basal position of the...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2009.11.001

    authors: Ki JS

    更新日期:2010-05-01 00:00:00

  • Morphologic and molecular characterization of seven species of the remarkably diverse and widely distributed metopid genus Urostomides Jankowski, 1964 (Armophorea, Ciliophora).

    abstract::The free-living ciliates of the order Metopida Jankowski, 1980 are pivotal players in the microbial food web of the sulfuretum, acting as hosts to prokaryotic endo- and ectosymbionts. They are also of interest in the study of the function and evolution of their mitochondrion-related organelle, the hydrogenosome. The t...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2017.07.003

    authors: Bourland W,Rotterová J,Čepička I

    更新日期:2017-10-01 00:00:00

  • Concepts in protistology: species definitions and boundaries.

    abstract::This paper summarises the Symposium 'Concepts in Protistology', during the VI European Congress of Protistology, Berlin, 25-29 July 2011. There is an increasing focus on cataloguing the number of species on earth, species barcoding initiatives, and the increasing need to reconcile molecular with morphological data in ...

    journal_title:European journal of protistology

    pub_type:

    doi:10.1016/j.ejop.2011.11.004

    authors: Boenigk J,Ereshefsky M,Hoef-Emden K,Mallet J,Bass D

    更新日期:2012-05-01 00:00:00

  • Morphology of four cyrtophorian ciliates (Protozoa, Ciliophora) from Yangtze Delta, China, with notes on the phylogeny of the genus Phascolodon.

    abstract::The morphology of four cyrtophorian ciliates, Dysteria ovalis, D. semilunaris, Phascolodon vorticella, and Chlamydonellopsis calkinsi, were investigated using living observation and protargol-staining. The morphology of D. ovalis is revealed in detail for the first time, and it is characterized by the following combin...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2016.08.005

    authors: Pan H,Wang L,Jiang J,Stoeck T

    更新日期:2016-10-01 00:00:00

  • Free-living amoebae and other neglected protistan pathogens: Health emergency signals?

    abstract::Protistan parasites have an undisputed global health impact. However, outside of a few key exceptions, e.g. the agent of malaria, most of these infectious agents are neglected as important health threats. The Symposium entitled "Free-living amoebae and neglected pathogenic protozoa: health emergency signals?" held at ...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2020.125760

    authors: Angelici MC,Walochnik J,Calderaro A,Saxinger L,Dacks JB

    更新日期:2020-11-28 00:00:00

  • Preliminary observations on the ultrastructure of mitosis in choanoflagellates.

    abstract::Mitotis in the choanoflagellate Monosiga sp. has been studied by electron microscopy for the first time based on serial sections of metaphase and anaphase. The dense metaphase plate is formed by chromosomes at the centre of the nucleus. Spindle poles are located at the opposite sides of this plate. The nuclear envelop...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80292-0

    authors: Karpov SA,Mylnikov AP

    更新日期:1993-02-19 00:00:00

  • Effects of platinic chloride on Tetrahymena pyriformis GL.

    abstract::The effects of 0.2-2.0 mM PtCl(4) have been investigated, the purpose was to test whether the compound would affect Tetrahymena in a manner similar to that of cis-dichlorodiammine-platinum(II), or cisplatin, which in 0.83 mM inhibits cell proliferation for 24 h and induces diminution of the inner mitochondrial membran...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80044-1

    authors: Nilsson JR

    更新日期:1992-05-22 00:00:00

  • Electron microscopical observations on the ciliate Furgasonia blochmanni Fauré-Fremiet, 1967: Part I: An update on morphology.

    abstract::Light- and electron microscopical observations on the morphology of the nassulid ciliate Furgasonia blochmanni show that it has somatic kinetids which reveal the nassulid pattern of somatic mono- and dikinetids with a 'B-cartwheel' in the lumen of the kinetosome and paired alveolocysts as regular components of the kin...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(88)80012-9

    authors: Eisler K

    更新日期:1988-12-01 00:00:00

  • Morphology and SSU rRNA gene-based phylogeny of two marine Euplotes species, E. orientalis spec. nov. and E. raikovi (Ciliophora, Euplotida).

    abstract::The living morphology, infraciliature and silverline system of two small marine Euplotes species, E. orientalis spec. nov. and E. raikoviAgamaliev, 1966, isolated from a sandy beach near Qingdao, China, were investigated. Euplotes orientalis is characterized by a combination of features including their small size (35-...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2009.11.003

    authors: Jiang J,Zhang Q,Warren A,Al-Rasheid KA,Song W

    更新日期:2010-05-01 00:00:00

  • Recent advances in the study of ciliate genes.

    abstract::This review gives a brief report on some recent advances in the study of molecular biology of ciliate genes. The main emphasis will be put on those results which may contribute to a better understanding of how gene structure and genome organization has evolved in ciliates. New data will be discussed in relation to the...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80384-6

    authors: Steinbrück G

    更新日期:1990-08-31 00:00:00

  • Ultrastructure of a novel tube-forming, intracellular parasite of dinoflagellates: Parvilucifera prorocentri sp. nov. (Alveolata, Myzozoa).

    abstract::We have characterized the intracellular development and ultrastructure of a novel parasite that infected the marine benthic dinoflagellate Prorocentrum fukuyoi. The parasite possessed a combination of features described for perkinsids and syndineans, and also possessed novel characters associated with its parasitic li...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2007.08.004

    authors: Leander BS,Hoppenrath M

    更新日期:2008-02-01 00:00:00

  • Rumen protozoal diversity in the Spanish ibex (Capra pyrenaica hispanica) as compared with domestic goats (Capra hircus).

    abstract::Rumen protozoal diversity in the Spanish ibex (SI) was studied in males (n=4), females (n=7) and young (n=4) from the Maestrazgo (Spain) and contrasted with domestic goats (n=3; DG) of the same region. There were no differences among SI types in protozoal concentration or in the number of protozoal species. Only proto...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2008.07.001

    authors: de la Fuente G,Belanche A,Abecia L,Dehority BA,Fondevila M

    更新日期:2009-05-01 00:00:00

  • Light and electron microscopic observations of the reproductive swarmer cells of nassellarian and spumellarian polycystines (Radiolaria).

    abstract::We observed reproductive swarmer cells of the nassellarian and spumellarian polycystine radiolarians Didymocyrtis ceratospyris, Pterocanium praetextum, Tetrapyle sp., and Triastrum aurivillii using light, scanning and transmission electron microscopy. The swarmer cells had subspherical to ovoid or spindle shapes with ...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2016.02.007

    authors: Yuasa T,Takahashi O

    更新日期:2016-06-01 00:00:00

  • Isolation and ultrastructural features of a new strain of Dimastigella trypaniformis Sandon 1928 (Bodonina, Kinetoplastida) and comparison with a previously isolated strain.

    abstract::A strain of the free-living flagellate Dimastigella trypaniformis Sandon was isolated from the gut contents of the Australian termite Mastotermes darwiniensis Froggatt. The fine structure of the isolate (Ulm strain) was compared with a strain isolated from soil in Scotland (Glasgow strain). The biflagellated trophozoi...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/S0932-4739(11)80404-9

    authors: Breunig A,König H,Brugerolle G,Vickerman K,Hertel H

    更新日期:1993-11-12 00:00:00

  • Yellow clay modulates carbohydrate and glutathione responses in the harmful dinoflagellate Cochlodinium polykrikoides and leads to sedimentation.

    abstract::The marine dinoflagellate Cochlodinium polykrikoides is a harmful algal bloom (HAB) species that severely impacts the environment and causes huge economic losses. Yellow clay (YC), considered to be a non-toxic and naturally-occurring material, represents an important step towards the direct control of HABs. In the pre...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2019.125642

    authors: Ki JS,Ebenezer V,Lim WA

    更新日期:2019-10-01 00:00:00

  • Successional change of testate amoeba assemblages along a space-for-time sequence of peatland development.

    abstract::It is well established that in ombrotrophic bogs, water-table depth (WTD) is the primary environmental control on testate amoeba distribution. However, the environmental controls on testate amoebae in minerotrophic fens are less well known and successional change in their assemblages associated with fen-bog peatland d...

    journal_title:European journal of protistology

    pub_type: 杂志文章

    doi:10.1016/j.ejop.2018.07.003

    authors: Zhang H,Väliranta M,Amesbury MJ,Charman DJ,Laine A,Tuittila ES

    更新日期:2018-10-01 00:00:00