Binding analysis of 1alpha- and 17alpha-dihydrotestosterone derivatives to homodimeric sex hormone-binding globulin.

Abstract:

:Binding studies of the interaction of immobilized 1alpha- and 17alpha-aminoalkyl derivatives of 5alpha-dihydrotestosterone (DHT) with purified N-deglycosylated homodimeric human sex hormone-binding globulin (SHBG) were performed using a surface plasmon resonance biosensor. These 1alpha- and 17alpha-derivatives with spacers of appropriate lengths between the amine function and the steroid ring skeleton enabled privileged, sterically undisturbed, interactions of either the 17- or 3-characteristic functional groups of DHT with SHBG. The association constants (K(a)1) for the binding of these immobilized DHT derivatives to the first binding site of SHBG, determined by SPR measurements, were 0.16 x 10(7) M(-1) for 17alpha-aminopropyl-17beta-hydroxy-5alpha-androstan-3-one (1), 1.64 x 10(7) M(-1) for 17alpha-aminocaproyl-17beta-hydroxy-5alpha-androstan-3-one (2), and 1.2 x 10(8) M(-1) for 1alpha-aminohexyl-17beta-hydroxy-5alpha-androstan-3-one (3). These values were compared with global K(a) data for the corresponding nonimmobilized DHT derivatives from equilibrium measurements using competitions with a tritiated testosterone tracer: the K(a) values were 1.25 x 10(7) M(-1) for 1, 1.50 x 10(7) M(-1) for 2, and 140 x 10(7) M(-1) for 3, confirming a remarkably high binding affinity of this latter compound for SHBG. A global fitting analysis of the biosensor data revealed that the interaction of the three immobilized steroids with SHBG was best described by a kinetic model assuming two structurally independent binding sites. This hypothesis of a bivalent binding model was also directly suggested by a dual fluorescent signal observed by the flow cytometry analysis of SHBG immobilized as a hybrid complex binding simultaneously two 1alpha-aminohexyl DHT ligands, one formed by 3, covalently coupled to phycoerythrin-labeled latex microspheres, and the other by the same DHT derivative, coupled to a fluorescein derivative (4).

journal_name

Biochemistry

journal_title

Biochemistry

authors

Metzger J,Schnitzbauer A,Meyer M,Söder M,Cuilleron CY,Hauptmann H,Huber E,Luppa PB

doi

10.1021/bi035269k

subject

Has Abstract

pub_date

2003-11-25 00:00:00

pages

13735-45

issue

46

eissn

0006-2960

issn

1520-4995

journal_volume

42

pub_type

杂志文章
  • Structural and thermodynamic consequences of burying a charged residue within the hydrophobic core of T4 lysozyme.

    abstract::To determine the energetic and structural consequences of placing a charged group within the core of a protein, two "buried charge" mutants, Met 102----Lys (M102K) and Leu 133----Asp (L133D) were constructed in phage T4 lysozyme. Both proteins fold at neutral pH, although they are substantially less stable than wild t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00113a006

    authors: Dao-pin S,Anderson DE,Baase WA,Dahlquist FW,Matthews BW

    更新日期:1991-12-10 00:00:00

  • The androgen receptor T877A mutant recruits LXXLL and FXXLF peptides differently than wild-type androgen receptor in a time-resolved fluorescence resonance energy transfer assay.

    abstract::The interactions of the ligand binding domain (LBD) of androgen receptor (AR) and the AR T877A mutant, found in prostate cancer, with peptides from coactivator and corepressor proteins or random phage display peptides were investigated using in vitro time-resolved fluorescence resonance energy transfer (TR-FRET). Inte...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi061321b

    authors: Ozers MS,Marks BD,Gowda K,Kupcho KR,Ervin KM,De Rosier T,Qadir N,Eliason HC,Riddle SM,Shekhani MS

    更新日期:2007-01-23 00:00:00

  • 2-Hydroxy-2'-deoxyadenosine 5'-triphosphate enhances A.T --> C.G mutations caused by 8-hydroxy-2'-deoxyguanosine 5'-triphosphate by suppressing its degradation upon replication in a HeLa extract.

    abstract::The coexistence effects of multiple kinds of oxidized deoxyribonucleotides were examined using an SV40 origin-dependent in vitro replication system with a HeLa extract. Oxidized dGTP and dATP, 8-hydroxy-2'-deoxyguanosine 5'-triphosphate (8-OH-dGTP) and 2-hydroxy-2'-deoxyadenosine 5'-triphosphate (2-OH-dATP), were used...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi062117r

    authors: Satou K,Kasai H,Masutani C,Hanaoka F,Harashima H,Kamiya H

    更新日期:2007-06-05 00:00:00

  • Synchronization of the three reaction centers within carbamoyl phosphate synthetase.

    abstract::Carbamoyl phosphate synthetase from E. coli catalyzes the synthesis of carbamoyl phosphate through a series of four reactions occurring at three active sites connected by a molecular tunnel of 100 A. To understand the mechanism for coordination and synchronization among the active sites, the pre-steady-state time cour...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992772h

    authors: Miles BW,Raushel FM

    更新日期:2000-05-02 00:00:00

  • Mechanistic and stereochemical studies of glycine oxidase from Bacillus subtilis strain R5.

    abstract::Glycine oxidase gene from a strain of Bacillus subtilis was cloned and expressed in Escherichia coli. The purified enzyme was found, by mass spectrometry, to have a protein M(r) of 40763 (value of 40761.6 predicted from DNA sequence) and a FAD prosthetic group M(r) of 785.1 (theoretical value of 785.5). Glycine oxidas...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi100553n

    authors: Jamil F,Gardner QA,Bashir Q,Rashid N,Akhtar M

    更新日期:2010-08-31 00:00:00

  • Reconstruction of quaternary structures of class II tRNA synthetases by rational mutagenensis of a conserved domain.

    abstract::Class II tRNA synthetases have long been known to have quaternary structures of alpha, alpha2, alpha2beta2, and alpha4, depending on the amino acid specificity and the organism from which the synthetase was isolated. Even the quaternary structures of enzymes for the same amino acid show variations in evolution. The ba...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971788+

    authors: Ribas de Pouplana L,Schimmel P

    更新日期:1997-12-09 00:00:00

  • Prothrombin domains: circular dichroic evidence for a lack of cooperativity.

    abstract::The far-ultraviolet circular dichroism spectra of bovine and human prothrombin, prothrombin fragment 1, prethrombin 1, prothrombin fragment 2, and prethrombin 2 (prethrombin 2des(1--13)) were determined and the method of Chen et al. [Chen, Y. H., Yang, J. T., & Martinez, H. M. (1972) Biochemistry 11, 4120--4131; Chen,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00577a017

    authors: Bloom JW,Mann KG

    更新日期:1979-05-15 00:00:00

  • Targeted cleavage of polynucleotides by complementary oligonucleotides covalently linked to iron-porphyrins.

    abstract::Oligothymidylates covalently linked to iron-porphyrins were synthesized to target the nuclease activity of Fe-porphyrin to complementary polynucleotides. In the presence of oxygen and a reducing agent, oligo(dT)7 bearing the reactive group attached to the 3'-phosphate was shown to be active in the cleavage of poly(dA)...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00370a002

    authors: Le Doan T,Perrouault L,Helene C,Chassignol M,Thuong NT

    更新日期:1986-11-04 00:00:00

  • Structure and interactions of phycocyanobilin chromophores in phycocyanin and allophycocyanin from an analysis of their resonance raman spectra.

    abstract::Raman spectra of phycocyanobilin, phycocyanin, and allophycocyanin were obtained at resonance with their visible and near-UV transitions. These spectra were empirically assigned with the help of 14N- and 15N-isotopic substitutions and comparisons with resonance Raman spectra of phycoerythrin. These results confirm the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00205a019

    authors: Szalontai B,Gombos Z,Csizmadia V,Bagyinka C,Lutz M

    更新日期:1994-10-04 00:00:00

  • Circular substrates of the hammerhead ribozyme shift the internal equilibrium further toward cleavage.

    abstract::To test whether the Y-shaped conformation of the hammerhead ribozyme is maintained throughout the catalytic pathway, the cleavage properties of circular substrates which bind the ribozyme through helices I and II were determined. Constraining the position of helices I and II in this manner did not significantly alter ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980307z

    authors: Stage-Zimmermann TK,Uhlenbeck OC

    更新日期:1998-06-30 00:00:00

  • Purification and characterization of a tissue plasminogen activator-inhibitor complex from human umbilical vein endothelial cell conditioned medium.

    abstract::Tissue plasminogen activator-inhibitor complexes were purified from the conditioned medium of human umbilical vein endothelial cells by affinity chromatography followed by gel filtration. It was found that a single complex was isolated which can exist in two distinct interconvertible conformations. These may be separa...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00397a037

    authors: Sanzo MA,Marasa JC,Wittwer AJ,Siegel NR,Harakas NK,Feder J

    更新日期:1987-11-17 00:00:00

  • Multiple forms of phosphodeoxyribomutase from Escherichia coli. Physical and chemical characterization.

    abstract::Phosphodeoxyribomutase from Escherichia coli has been purified to homogeneity. Chromatography on DEAE-Sephadex revealed three peaks of enzyme activity, designated form I, form II, and form III. Form III could be further separated into form III-1 and form III-2 by polyacrylamide gel electrophoresis. The four different ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00674a021

    authors: Leer JC,Hammer-Jespersen K

    更新日期:1975-02-11 00:00:00

  • Crystal structures of the recombinant kringle 1 domain of human plasminogen in complexes with the ligands epsilon-aminocaproic acid and trans-4-(aminomethyl)cyclohexane-1-carboxylic Acid.

    abstract::The X-ray crystal structures of the complexes of the recombinant kringle 1 domain of human plasminogen (Klpg) with the ligands epsilon-aminocaproic acid (EACA) and trans-4-(aminomethyl)cyclohexane-1-carboxylic acid (AMCHA), which are representative of a class of in vivo antifibrinolytic agents, have been determined at...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9521351

    authors: Mathews II,Vanderhoff-Hanaver P,Castellino FJ,Tulinsky A

    更新日期:1996-02-27 00:00:00

  • A conservative isoleucine to leucine mutation causes major rearrangements and cold sensitivity in KlenTaq1 DNA polymerase.

    abstract::Assembly of polymerase chain reactions at room temperature can sometimes lead to low yields or unintentional products due to mispriming. Mutation of isoleucine 707 to leucine in DNA polymerase I from Thermus aquaticus substantially decreases its activity at room temperature without compromising its ability to amplify ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi501198f

    authors: Wu EY,Walsh AR,Materne EC,Hiltner EP,Zielinski B,Miller BR 3rd,Mawby L,Modeste E,Parish CA,Barnes WM,Kermekchiev MB

    更新日期:2015-01-27 00:00:00

  • Location of the catalytic site for phosphoenolpyruvate formation within the primary structure of Clostridium symbiosum pyruvate phosphate dikinase. 2. Site-directed mutagenesis of an essential arginine contained within an apparent P-loop.

    abstract::Pyruvate phosphate dikinase catalyzes the interconversion of adenosine 5'-triphosphate (ATP), orthophosphate (P(i)), and pyruvate with adenosine 5'-monophosphate (AMP), pyrophosphate (PP(i)), and phosphoenolpyruvate (PEP). The Arg 561 residue of Clostridium symbiosum PPDK is contained within a Gly-rich stretch of sequ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00007a012

    authors: Yankie L,Xu Y,Dunaway-Mariano D

    更新日期:1995-02-21 00:00:00

  • Trypsin disrupts the trafficking of the human dopamine transporter by alpha-synuclein and its A30P mutant.

    abstract::Alpha-synuclein modulates dopamine homeostasis in dopamine-producing neurons of substantia nigra, partly through regulation of human dopamine transporter (hDAT) activity. To identify the underlying mechanisms, we disrupted the modulation of hDAT activity by wild-type (wt) alpha-synuclein, and its familial Parkinson's ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035308s

    authors: Wersinger C,Vernier P,Sidhu A

    更新日期:2004-02-10 00:00:00

  • Hydrogen exchange kinetics changes upon formation of the soybean trypsin inhibitor-trypsin complex.

    abstract::The hydrogen exchange kinetics of the complex of trypsin-soybean trypsin inhibitor (Kunitz) have been compared to the calculated sum of the exchange kinetics for the inhibitor and trypsin measured separately. The exchange rates observed for the complex are substantially less than the sum of the exchange rates in the t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00686a020

    authors: Woodward CK,Ellis LM

    更新日期:1975-07-29 00:00:00

  • A structural element that facilitates proton-coupled electron transfer in oxalate decarboxylase.

    abstract::The conformational properties of an active-site loop segment, defined by residues Ser(161)-Glu(162)-Asn(163)-Ser(164), have been shown to be important for modulating the intrinsic reactivity of Mn(II) in the active site of Bacillus subtilis oxalate decarboxylase. We now detail the functional and structural consequence...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300001q

    authors: Saylor BT,Reinhardt LA,Lu Z,Shukla MS,Nguyen L,Cleland WW,Angerhofer A,Allen KN,Richards NG

    更新日期:2012-04-03 00:00:00

  • Molecular interaction of DNA with bisplatinum(II) complexes having bis(vicinal 1,2-diamines) as ligand.

    abstract::The interaction of novel, tetrafunctional bisplatinum compounds with DNA was investigated. These compounds have bis(vicinal 1,2-diamines) as ligand. The reactions' efficiency, types of cross-links, alterations of the global DNA structure, and sequence selectivity differ significantly from the corresponding features of...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi970741l

    authors: Büning H,Altman J,Beck W,Zorbas H

    更新日期:1997-09-23 00:00:00

  • Contribution of exogenous substrates to acetyl coenzyme A: measurement by 13C NMR under non-steady-state conditions.

    abstract::A method is presented for the rapid determination of substrate selection in a manner that is not restricted to conditions of metabolic and isotopic steady state. Competition between several substrates can be assessed directly and continuously in a single experiment, allowing the effect of interventions to be studied. ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00481a002

    authors: Malloy CR,Thompson JR,Jeffrey FM,Sherry AD

    更新日期:1990-07-24 00:00:00

  • Isothermal titration calorimetric studies on the binding of deoxytrimannoside derivatives with artocarpin: implications for a deep-seated combining site in lectins.

    abstract::The carbohydrate binding specificity of the seed lectin from Artocarpus integrifolia, artocarpin, has been elucidated by the enzyme-linked lectin absorbent assay [Misquith, S., et al (1994) J. Biol. Chem. 269, 30393-30401], wherein it was demonstrated to be a Man/Glc specific lectin with high affinity for the trisacch...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi000744p

    authors: Rani PG,Bachhawat K,Reddy GB,Oscarson S,Surolia A

    更新日期:2000-09-05 00:00:00

  • Nuclear matrix localization and specific matrix DNA binding by receptor binding factor 1 of the avian oviduct progesterone receptor.

    abstract::A chromatin acceptor protein for the avian oviduct progesterone receptor (PR), termed receptor binding factor 1 (RBF-1), has recently been shown to (1) be a component of the nuclear binding sites (acceptor sites) for PR and (2) generate high-affinity binding sites (termed the RBF-1 class of sites) on avian genomic DNA...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00103a019

    authors: Schuchard M,Subramaniam M,Ruesink T,Spelsberg TC

    更新日期:1991-10-01 00:00:00

  • Structural Basis for Excision of 5-Formylcytosine by Thymine DNA Glycosylase.

    abstract::Thymine DNA glycosylase (TDG) is a base excision repair enzyme with key functions in epigenetic regulation. Performing a critical step in a pathway for active DNA demethylation, TDG removes 5-formylcytosine and 5-carboxylcytosine, oxidized derivatives of 5-methylcytosine that are generated by TET (ten-eleven transloca...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b00982

    authors: Pidugu LS,Flowers JW,Coey CT,Pozharski E,Greenberg MM,Drohat AC

    更新日期:2016-11-15 00:00:00

  • Protected sulfur transfer reactions by the Escherichia coli Suf system.

    abstract::The first step in sulfur mobilization for the biosynthesis of Fe-S clusters under oxidative stress and iron starvation in Escherichia coli involves a cysteine desulfurase SufS. Its catalytic reactivity is dependent on the presence of a sulfur acceptor protein, SufE, which acts as the preferred substrate for this enzym...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi4001479

    authors: Selbach BP,Pradhan PK,Dos Santos PC

    更新日期:2013-06-11 00:00:00

  • Structure and Dynamics of RNA Repeat Expansions That Cause Huntington's Disease and Myotonic Dystrophy Type 1.

    abstract::RNA repeat expansions cause a host of incurable, genetically defined diseases. The most common class of RNA repeats consists of trinucleotide repeats. These long, repeating transcripts fold into hairpins containing 1 × 1 internal loops that can mediate disease via a variety of mechanism(s) in which RNA is the central ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00252

    authors: Chen JL,VanEtten DM,Fountain MA,Yildirim I,Disney MD

    更新日期:2017-07-11 00:00:00

  • Membrane Docking of the Synaptotagmin 7 C2A Domain: Electron Paramagnetic Resonance Measurements Show Contributions from Two Membrane Binding Loops.

    abstract::The synaptotagmin (Syt) family of proteins plays an important role in vesicle docking and fusion during Ca(2+)-induced exocytosis in a wide variety of cell types. Its role as a Ca(2+) sensor derives primarily from its two C2 domains, C2A and C2B, which insert into anionic lipid membranes upon binding Ca(2+). Syt isofo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00421

    authors: Osterberg JR,Chon NL,Boo A,Maynard FA,Lin H,Knight JD

    更新日期:2015-09-22 00:00:00

  • Casein kinase II phosphorylation of caldesmon downregulates myosin-caldesmon interactions.

    abstract::It is well-known that caldesmon (CaD) is a substrate for casein kinase II (CKII), and the phosphorylation of CaD by CKII regulates the interaction of CaD with myosin. However, the functionally relevant CKII phosphorylation site(s) on CaD and the precise role of CaD phosphorylation by CKII in mediating CaD's function h...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0006767

    authors: Wang Z,Yang ZQ

    更新日期:2000-09-12 00:00:00

  • Characterization of human aspartoacylase: the brain enzyme responsible for Canavan disease.

    abstract::Aspartoacylase catalyzes the deacetylation of N-acetylaspartic acid (NAA) to produce acetate and L-aspartate and is the only brain enzyme that has been shown to effectively metabolize NAA. Although the exact role of this enzymatic reaction has not yet been completely elucidated, the metabolism of NAA appears to be nec...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi052608w

    authors: Le Coq J,An HJ,Lebrilla C,Viola RE

    更新日期:2006-05-09 00:00:00

  • Structural characterization of the ATP-hydrolyzing portion of the coated vesicle proton pump.

    abstract::The ATP-hydrolyzing portion of the proton pump from clathrin-coated vesicles (isolated from calf brain) was solubilized with three nondenaturing detergents (cholate, octyl glucoside, and Triton X-100). The hydrodynamic properties of the solubilized (Mg2+)-ATPase were then determined by sedimentation analysis in H2O an...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00363a015

    authors: Forgac M,Berne M

    更新日期:1986-07-29 00:00:00

  • Factors determining the orientation of axially coordinated imidazoles in heme proteins.

    abstract::Factors determining conformations of imidazole axially coordinated to heme in heme proteins were investigated by analyzing 693 hemes in 432 different crystal structures of heme proteins from the Protein Data Bank (PDB), where at least one histidine is ligated to heme. The results from a search of the PDB for protein s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi010428q

    authors: Zarić SD,Popović DM,Knapp EW

    更新日期:2001-07-03 00:00:00