Effect of confounding variables on hemodynamic response function estimation using averaging and deconvolution analysis: An event-related NIRS study.

Abstract:

:Slow and rapid event-related designs are used in fMRI and functional near-infrared spectroscopy (fNIRS) experiments to temporally characterize the brain hemodynamic response to discrete events. Conventional averaging (CA) and the deconvolution method (DM) are the two techniques commonly used to estimate the Hemodynamic Response Function (HRF) profile in event-related designs. In this study, we conducted a series of simulations using synthetic and real NIRS data to examine the effect of the main confounding factors, including event sequence timing parameters, different types of noise, signal-to-noise ratio (SNR), temporal autocorrelation and temporal filtering on the performance of these techniques in slow and rapid event-related designs. We also compared systematic errors in the estimates of the fitted HRF amplitude, latency and duration for both techniques. We further compared the performance of deconvolution methods based on Finite Impulse Response (FIR) basis functions and gamma basis sets. Our results demonstrate that DM was much less sensitive to confounding factors than CA. Event timing was the main parameter largely affecting the accuracy of CA. In slow event-related designs, deconvolution methods provided similar results to those obtained by CA. In rapid event-related designs, our results showed that DM outperformed CA for all SNR, especially above -5 dB regardless of the event sequence timing and the dynamics of background NIRS activity. Our results also show that periodic low-frequency systemic hemodynamic fluctuations as well as phase-locked noise can markedly obscure hemodynamic evoked responses. Temporal autocorrelation also affected the performance of both techniques by inducing distortions in the time profile of the estimated hemodynamic response with inflated t-statistics, especially at low SNRs. We also found that high-pass temporal filtering could substantially affect the performance of both techniques by removing the low-frequency components of HRF profiles. Our results emphasize the importance of characterization of event timing, background noise and SNR when estimating HRF profiles using CA and DM in event-related designs.

journal_name

Neuroimage

journal_title

NeuroImage

authors

Aarabi A,Osharina V,Wallois F

doi

10.1016/j.neuroimage.2017.04.048

subject

Has Abstract

pub_date

2017-07-15 00:00:00

pages

25-49

eissn

1053-8119

issn

1095-9572

pii

S1053-8119(17)30366-X

journal_volume

155

pub_type

杂志文章
  • An examination of the effects of stimulus type, encoding task, and functional connectivity on the role of right prefrontal cortex in recognition memory.

    abstract::Right anterior prefrontal cortex and other brain areas are active during memory retrieval but the role of prefrontal cortex and how it interacts with these other regions to mediate memory function remain unclear. To explore these issues we used positron emission tomography to examine the effects of stimulus material a...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1006/nimg.2001.0865

    authors: Grady CL,McIntosh AR,Beig S,Craik FI

    更新日期:2001-09-01 00:00:00

  • A comparison of various MRI feature types for characterizing whole brain anatomical differences using linear pattern recognition methods.

    abstract::There is a widespread interest in applying pattern recognition methods to anatomical neuroimaging data, but so far, there has been relatively little investigation into how best to derive image features in order to make the most accurate predictions. In this work, a Gaussian Process machine learning approach was used f...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2018.05.065

    authors: Monté-Rubio GC,Falcón C,Pomarol-Clotet E,Ashburner J

    更新日期:2018-09-01 00:00:00

  • Removal of FMRI environment artifacts from EEG data using optimal basis sets.

    abstract::The combination of functional magnetic resonance imaging (FMRI) and electroencephalography (EEG) has received much recent attention, since it potentially offers a new tool for neuroscientists that makes simultaneous use of the strengths of the two modalities. However, EEG data collected in such experiments suffer from...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2005.06.067

    authors: Niazy RK,Beckmann CF,Iannetti GD,Brady JM,Smith SM

    更新日期:2005-11-15 00:00:00

  • Hippocampus-specific fMRI group activation analysis using the continuous medial representation.

    abstract::We present a new shape-based approach for regional group activation analysis in fMRI studies. The method restricts anatomical normalization, spatial smoothing and random effects statistical analysis to the space inside and around a structure of interest. Normalization involves finding intersubject correspondences betw...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2007.01.029

    authors: Yushkevich PA,Detre JA,Mechanic-Hamilton D,Fernández-Seara MA,Tang KZ,Hoang A,Korczykowski M,Zhang H,Gee JC

    更新日期:2007-05-01 00:00:00

  • Characterizing spatial and temporal features of autobiographical memory retrieval networks: a partial least squares approach.

    abstract::Conway (Conway, M.A., 1992. A structural model of autobiographical memory. In: Conway, M.A., Spinnler, H., Wagenaar, W.A. (Eds.), Theoretical Perspectives on Autobiological Memory. Kluwer Academic Publishers, Dordrecht, The Netherlands, pp. 167-194) proposed that two types of autobiographical memories (AMs) exist with...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.08.007

    authors: Addis DR,McIntosh AR,Moscovitch M,Crawley AP,McAndrews MP

    更新日期:2004-12-01 00:00:00

  • Origins of the BOLD post-stimulus undershoot.

    abstract::The interpretation of the blood-oxygenation level-dependent (BOLD) post-stimulus undershoot has been a topic of considerable interest, as the mechanisms behind this prominent BOLD transient may provide valuable clues on the neurovascular response process and energy supply routes of the brain. Biomechanical theories ex...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.03.015

    authors: Chen JJ,Pike GB

    更新日期:2009-07-01 00:00:00

  • An fMRI study of joint attention experience.

    abstract::Although much is now known about eye movement detection, little is known about the higher cognitive processes involved in joint attention. We developed video stimuli which when watched, engender an experience of joint attention in the observer. This allowed us to compare an experience of joint attention to nonjoint at...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.10.047

    authors: Williams JH,Waiter GD,Perra O,Perrett DI,Whiten A

    更新日期:2005-03-01 00:00:00

  • A rapid topographic mapping and eye alignment method using optical imaging in Macaque visual cortex.

    abstract::In optical imaging experiments, it is often advantageous to map the field of view and to converge the eyes without electrophysiological recording. This occurs when limited space precludes placement of an electrode or in chronic optical chambers in which one may not want to introduce an electrode each session or for de...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2008.10.007

    authors: Lu HD,Chen G,Ts'o DY,Roe AW

    更新日期:2009-02-01 00:00:00

  • RE: Warnings and caveats in brain controllability.

    abstract::The use of network control theory to analyze the organization of white matter fibers in the human brain has the potential to enable mechanistic theories of cognition, and to inform the development of novel diagnostics and treatments for neurological disease and psychiatric disorders (Gu et al., 2015). The recent artic...

    journal_title:NeuroImage

    pub_type: 评论,杂志文章

    doi:10.1016/j.neuroimage.2019.05.001

    authors: Pasqualetti F,Gu S,Bassett DS

    更新日期:2019-08-15 00:00:00

  • Age-related grey matter changes in preterm infants: an MRI study.

    abstract::Grey matter (GM) maturation has not been previously studied in healthy preterm children. The purpose of this study was to evaluate the age dependency of GM development in 116 GM areas in preterm subjects. Sixty one preterm infants (corrected age: 13.7+/-9.92 months, gestational age: 33.4+/-1.9 weeks) with normal struc...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.03.072

    authors: Tzarouchi LC,Astrakas LG,Xydis V,Zikou A,Kosta P,Drougia A,Andronikou S,Argyropoulou MI

    更新日期:2009-10-01 00:00:00

  • Mindboggle: a scatterbrained approach to automate brain labeling.

    abstract::Mindboggle (http://www.binarybottle.com/mindboggle.html) is a fully automated, feature matching approach to label cortical structures and activity anatomically in human brain MRI data. This approach does not assume that the existence of component structures and their relative spatial relationship is preserved from bra...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.09.016

    authors: Klein A,Hirsch J

    更新日期:2005-01-15 00:00:00

  • High-gamma activity in an attention network predicts individual differences in elderly adults' behavioral performance.

    abstract::The current study used a magnetoencephalogram to investigate the relationship between high-gamma (52-100 Hz) activity within an attention network and individual differences in behavioral performance among healthy elderly adults. We analyzed brain activity in 41 elderly subjects performing a 3-stimulus visual oddball t...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.06.037

    authors: Akimoto Y,Nozawa T,Kanno A,Ihara M,Goto T,Ogawa T,Kambara T,Sugiura M,Okumura E,Kawashima R

    更新日期:2014-10-15 00:00:00

  • Frontal alpha oscillations distinguish leaders from followers: multivariate decoding of mutually interacting brains.

    abstract::Successful social interactions rely upon the abilities of two or more people to mutually exchange information in real-time, while simultaneously adapting to one another. The neural basis of social cognition has mostly been investigated in isolated individuals, and more recently using two-person paradigms to quantify t...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.03.003

    authors: Konvalinka I,Bauer M,Stahlhut C,Hansen LK,Roepstorff A,Frith CD

    更新日期:2014-07-01 00:00:00

  • MEG-based decoding of the spatiotemporal dynamics of visual category perception.

    abstract::Visual processing is a complex task which is best investigated using sensitive multivariate analysis methods that can capture representation-specific brain activity over both time and space. In this study, we applied a multivariate decoding algorithm to MEG data of subjects engaged in passive viewing of images of face...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.07.075

    authors: van de Nieuwenhuijzen ME,Backus AR,Bahramisharif A,Doeller CF,Jensen O,van Gerven MA

    更新日期:2013-12-01 00:00:00

  • Is it time to re-prioritize neuroimaging databases and digital repositories?

    abstract::The development of in vivo brain imaging has lead to the collection of large quantities of digital information. In any individual research article, several tens of gigabytes-worth of data may be represented-collected across normal and patient samples. With the ease of collecting such data, there is increased desire fo...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.03.086

    authors: Van Horn JD,Toga AW

    更新日期:2009-10-01 00:00:00

  • Contextual interference in recognition memory with age.

    abstract::Previous behavioral research suggests that although elderly adults' memory benefits from supportive context, misleading or irrelevant contexts produce greater interference. In the present study, we use event-related fMRI to investigate age differences when processing contextual information to make recognition judgment...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2007.01.043

    authors: Gutchess AH,Hebrank A,Sutton BP,Leshikar E,Chee MW,Tan JC,Goh JO,Park DC

    更新日期:2007-04-15 00:00:00

  • Neural circuitry underlying sentence-level linguistic prosody.

    abstract::This study investigates the neural substrates underlying the perception of two sentence-level prosodic phenomena in Mandarin Chinese: contrastive stress (initial vs. final emphasis position) and intonation (declarative vs. interrogative modality). In an fMRI experiment, Chinese and English listeners were asked to sele...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.neuroimage.2005.06.002

    authors: Tong Y,Gandour J,Talavage T,Wong D,Dzemidzic M,Xu Y,Li X,Lowe M

    更新日期:2005-11-01 00:00:00

  • Estimation of hyper-parameters for a hierarchical model of combined cortical and extra-brain current sources in the MEG inverse problem.

    abstract::One of the major obstacles in estimating cortical currents from MEG signals is the disturbance caused by magnetic artifacts derived from extra-cortical current sources such as heartbeats and eye movements. To remove the effect of such extra-brain sources, we improved the hybrid hierarchical variational Bayesian method...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.07.010

    authors: Morishige K,Yoshioka T,Kawawaki D,Hiroe N,Sato MA,Kawato M

    更新日期:2014-11-01 00:00:00

  • Decoded fMRI neurofeedback can induce bidirectional confidence changes within single participants.

    abstract::Neurofeedback studies using real-time functional magnetic resonance imaging (rt-fMRI) have recently incorporated the multi-voxel pattern decoding approach, allowing for fMRI to serve as a tool to manipulate fine-grained neural activity embedded in voxel patterns. Because of its tremendous potential for clinical applic...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.neuroimage.2017.01.069

    authors: Cortese A,Amano K,Koizumi A,Lau H,Kawato M

    更新日期:2017-04-01 00:00:00

  • Hemispheric specialization of human inferior temporal cortex during coarse-to-fine and fine-to-coarse analysis of natural visual scenes.

    abstract::Recent models of visual recognition have suggested that perceptual analysis may start with a parallel extraction of different spatial frequencies (SF), using a preferential coarse-to-fine (low-to-high SF) sequence of processing. A rapid extraction of low spatial frequency (LSF) information may thus provide an initial ...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.neuroimage.2005.06.006

    authors: Peyrin C,Schwartz S,Seghier M,Michel C,Landis T,Vuilleumier P

    更新日期:2005-11-01 00:00:00

  • Is the P300 wave an endophenotype for schizophrenia? A meta-analysis and a family study.

    abstract:INTRODUCTION:We assessed the usefulness of the P300 wave as endophenotype for schizophrenia by means of a meta-analysis of the literature as well as our own family study. METHOD:Meta-analysis: We conducted a systematic search for articles published between 1983 and 2003 that reported P300 measures in non-psychotic rel...

    journal_title:NeuroImage

    pub_type: 杂志文章,meta分析

    doi:10.1016/j.neuroimage.2005.05.022

    authors: Bramon E,McDonald C,Croft RJ,Landau S,Filbey F,Gruzelier JH,Sham PC,Frangou S,Murray RM

    更新日期:2005-10-01 00:00:00

  • Twelve-month metabolic declines in probable Alzheimer's disease and amnestic mild cognitive impairment assessed using an empirically pre-defined statistical region-of-interest: findings from the Alzheimer's Disease Neuroimaging Initiative.

    abstract::Alzheimer's disease (AD) is characterized by specific and progressive reductions in fluorodeoxyglucose positron emission tomography (FDG PET) measurements of the cerebral metabolic rate for glucose (CMRgl), some of which may precede the onset of symptoms. In this report, we describe twelve-month CMRgl declines in 69 p...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2010.02.064

    authors: Chen K,Langbaum JB,Fleisher AS,Ayutyanont N,Reschke C,Lee W,Liu X,Bandy D,Alexander GE,Thompson PM,Foster NL,Harvey DJ,de Leon MJ,Koeppe RA,Jagust WJ,Weiner MW,Reiman EM,Alzheimer's Disease Neuroimaging Initiative.

    更新日期:2010-06-01 00:00:00

  • Analysis of continuous infusion functional PET (fPET) in the human brain.

    abstract::Functional positron emission tomography (fPET) is a neuroimaging method involving continuous infusion of 18-F-fluorodeoxyglucose (FDG) radiotracer during the course of a PET examination. Compared with the conventional bolus administration of FDG in a static PET scan, which provides an average glucose uptake into the b...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.116720

    authors: Li S,Jamadar SD,Ward PGD,Premaratne M,Egan GF,Chen Z

    更新日期:2020-06-01 00:00:00

  • Asymmetry in prefrontal resting-state EEG spectral power underlies individual differences in phasic and sustained cognitive control.

    abstract::In our daily life, we constantly exert sustained and phasic cognitive control processes to manage multiple competing task sets and rapidly switch between them. Increasing research efforts are attempting to unveil how the brain mediates these processes, highlighting the importance of the prefrontal cortex. An intriguin...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2015.09.035

    authors: Ambrosini E,Vallesi A

    更新日期:2016-01-01 00:00:00

  • Geometric atlas: modeling the cortex as an organized surface.

    abstract::Recent atlases of the cortical surface are based on a modelization of the cerebral cortex as a topological sphere. This captures effectively its organization as a regular bidimensional sheet of layers parallel to the surface and with perpendicular cortical columns. Yet, while in the vertical direction cortices are alm...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2003.07.008

    authors: Toro R,Burnod Y

    更新日期:2003-11-01 00:00:00

  • Effects of background suppression on the sensitivity of dual-echo arterial spin labeling MRI for BOLD and CBF signal changes.

    abstract::Dual-echo arterial spin labeling (DE-ASL) enables the simultaneous acquisition of BOLD and CBF fMRI data and is often used for calibrated BOLD and cerebrovascular CO2 reactivity measurements. DE-ASL, like all ASL techniques, suffers from a low intrinsic CBF SNR, which can be improved by suppressing the background sign...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.09.051

    authors: Ghariq E,Chappell MA,Schmid S,Teeuwisse WM,van Osch MJP

    更新日期:2014-12-01 00:00:00

  • Semantic relevance explains category effects in medial fusiform gyri.

    abstract::We used functional Magnetic Resonance Imaging to explore the neural correlates of semantic relevance in 12 healthy participants performing a picture-naming task. In addition, we tested the hypothesis that category effects typically found in functional imaging can be partly explained in terms of different semantic rele...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2005.10.017

    authors: Mechelli A,Sartori G,Orlandi P,Price CJ

    更新日期:2006-04-15 00:00:00

  • Multiple foci of spatial attention in multimodal working memory.

    abstract::The maintenance of sensory information in working memory (WM) is mediated by the attentional activation of stimulus representations that are stored in perceptual brain regions. Using event-related potentials (ERPs), we measured tactile and visual contralateral delay activity (tCDA/CDA components) in a bimodal WM task ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2016.08.019

    authors: Katus T,Eimer M

    更新日期:2016-11-15 00:00:00

  • Task-dependent activations of human auditory cortex during spatial discrimination and spatial memory tasks.

    abstract::In the present study, we applied high-resolution functional magnetic resonance imaging (fMRI) of the human auditory cortex (AC) and adjacent areas to compare activations during spatial discrimination and spatial n-back memory tasks that were varied parametrically in difficulty. We found that activations in the anterio...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.10.069

    authors: Rinne T,Koistinen S,Talja S,Wikman P,Salonen O

    更新日期:2012-02-15 00:00:00

  • Confounding effects of anesthesia on functional activation in rodent brain: a study of halothane and alpha-chloralose anesthesia.

    abstract::Functional magnetic resonance imaging (fMRI) in animal models provides a platform for more extensive investigation of drug effects and underlying physiological mechanisms than is possible in humans. However, it is usually necessary for the animal to be anesthetized. In this study, we have used a rat model of direct co...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.08.011

    authors: Austin VC,Blamire AM,Allers KA,Sharp T,Styles P,Matthews PM,Sibson NR

    更新日期:2005-01-01 00:00:00