Abstract:
:The ability of specific neurons to regenerate their axons after injury is governed by cell-intrinsic regeneration pathways. However, the signaling pathways that orchestrate axon regeneration are not well understood. In Caenorhabditis elegans, initiation of axon regeneration is positively regulated by SVH-2 Met-like growth factor receptor tyrosine kinase (RTK) signaling through the JNK MAPK pathway. Here we show that SVH-4/DDR-2, an RTK containing a discoidin domain that is activated by collagen, and EMB-9 collagen type IV regulate the regeneration of neurons following axon injury. The scaffold protein SHC-1 interacts with both DDR-2 and SVH-2. Furthermore, we demonstrate that overexpression of svh-2 and shc-1 suppresses the delay in axon regeneration observed in ddr-2 mutants, suggesting that DDR-2 functions upstream of SVH-2 and SHC-1. These results suggest that DDR-2 modulates the SVH-2-JNK pathway via SHC-1. We thus identify two different RTK signaling networks that play coordinated roles in the regulation of axonal regeneration.
journal_name
PLoS Genetjournal_title
PLoS geneticsauthors
Hisamoto N,Nagamori Y,Shimizu T,Pastuhov SI,Matsumoto Kdoi
10.1371/journal.pgen.1006475subject
Has Abstractpub_date
2016-12-16 00:00:00pages
e1006475issue
12eissn
1553-7390issn
1553-7404pii
PGENETICS-D-16-01050journal_volume
12pub_type
杂志文章相关文献
PLoS Genetics文献大全abstract::Retinoblastoma (Rb), the most common pediatric intraocular neoplasm, results from inactivation of both alleles of the RB1 tumor suppressor gene. The second allele is most commonly lost, as demonstrated by loss of heterozygosity studies. RB1 germline carriers usually develop bilateral tumors, but some Rb families displ...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005888
更新日期:2016-02-29 00:00:00
abstract::MicroRNAs (miRNAs) post-transcriptionally regulate the expression of thousands of distinct mRNAs. While some regulatory interactions help to maintain basal cellular functions, others are likely relevant in more specific settings, such as response to stress. Here we describe such a role for the mir-290-295 cluster, the...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1002054
更新日期:2011-05-01 00:00:00
abstract::The intra-S phase checkpoint kinase of metazoa and yeast, ATR/MEC1, protects chromosomes from DNA damage and replication stress by phosphorylating subunits of the replicative helicase, MCM2-7. Here we describe an unprecedented ATR-dependent pathway in Tetrahymena thermophila in which the essential pre-replicative comp...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005405
更新日期:2015-07-28 00:00:00
abstract::[This corrects the article DOI: 10.1371/journal.pgen.1008320.]. ...
journal_title:PLoS genetics
pub_type: 已发布勘误
doi:10.1371/journal.pgen.1008556
更新日期:2019-12-19 00:00:00
abstract::Recent studies in population of European ancestry have shown that 30% ~ 50% of heritability for human complex traits such as height and body mass index, and common diseases such as schizophrenia and rheumatoid arthritis, can be captured by common SNPs and that genetic variation attributed to chromosomes are in proport...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1003355
更新日期:2013-01-01 00:00:00
abstract::In this study we have analysed AtASY3, a coiled-coil domain protein that is required for normal meiosis in Arabidopsis. Analysis of an Atasy3-1 mutant reveals that loss of the protein compromises chromosome axis formation and results in reduced numbers of meiotic crossovers (COs). Although the frequency of DNA double-...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1002507
更新日期:2012-02-01 00:00:00
abstract::Genotoxic agents that cause double-strand breaks (DSBs) often generate damage at the break termini. Processing enzymes, including nucleases and polymerases, must remove damaged bases and/or add new bases before completion of repair. Artemis is a nuclease involved in mammalian nonhomologous end joining (NHEJ), but in S...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1000060
更新日期:2008-04-25 00:00:00
abstract::The bHLH transcription factor, Phytochrome Interacting Factor 3 (PIF3), interacts specifically with the photoactivated, Pfr, form of Arabidopsis phytochrome B (phyB). This interaction induces PIF3 phosphorylation and degradation in vivo and modulates phyB-mediated seedling deetiolation in response to red light. To ide...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1000352
更新日期:2009-01-01 00:00:00
abstract::Anaplasma phagocytophilum is an emerging pathogen that causes human granulocytic anaplasmosis. Infection with this zoonotic pathogen affects cell function in both vertebrate host and the tick vector, Ixodes scapularis. Global tissue-specific response and apoptosis signaling pathways were characterized in I. scapularis...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005120
更新日期:2015-03-27 00:00:00
abstract::Systematic characterization of ẖybrid incompatibility (HI) between related species remains the key to understanding speciation. The genetic basis of HI has been intensively studied in Drosophila species, but remains largely unknown in other species, including nematodes, which is mainly due to the lack of a sister spec...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1004993
更新日期:2015-02-18 00:00:00
abstract::Evolutionary outcomes depend not only on the selective forces acting upon a species, but also on the genetic background. However, large timescales and uncertain historical selection pressures can make it difficult to discern such important background differences between species. Experimental evolution is one tool to c...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1006585
更新日期:2017-02-14 00:00:00
abstract::During nervous system development, neuronal cell bodies and their axodendritic projections are precisely positioned through transiently expressed patterning cues. We show here that two neuronally expressed, secreted immunoglobulin (Ig) domain-containing proteins, ZIG-5 and ZIG-8, have no detectable role during embryon...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1002819
更新日期:2012-01-01 00:00:00
abstract::Most B cell lymphomas originate from B cells that have germinal center (GC) experience and bear chromosome translocations and numerous point mutations. GC B cells remodel their immunoglobulin (Ig) genes by somatic hypermutation (SHM) and class switch recombination (CSR) in their Ig genes. Activation Induced Deaminase ...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1008960
更新日期:2020-12-23 00:00:00
abstract::In flowering plants, gene expression in the haploid male gametophyte (pollen) is essential for sperm delivery and double fertilization. Pollen also undergoes dynamic epigenetic regulation of expression from transposable elements (TEs), but how this process interacts with gene expression is not clearly understood. To e...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1008462
更新日期:2020-04-01 00:00:00
abstract::X-chromosome inactivation (XCI) in female lymphocytes is uniquely regulated, as the inactive X (Xi) chromosome lacks localized Xist RNA and heterochromatin modifications. Epigenetic profiling reveals that Xist RNA is lost from the Xi at the pro-B cell stage and that additional heterochromatic modifications are gradual...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1007050
更新日期:2017-10-09 00:00:00
abstract::Cdc6p is an essential component of the pre-replicative complex (pre-RC), which binds to DNA replication origins to promote initiation of DNA replication. Only once per cell cycle does DNA replication take place. After initiation, the pre-RC components are disassembled in order to prevent re-replication. It has been sh...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1003099
更新日期:2012-01-01 00:00:00
abstract::During neural circuit formation, most axons are guided to complex environments, coming into contact with multiple potential synaptic partners. However, it is critical that they recognize specific neurons with which to form synapses. Here, we utilize the split GFP-based marker Neuroligin-1 GFP Reconstitution Across Syn...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1007312
更新日期:2018-05-09 00:00:00
abstract::One of the striking findings of comparative developmental genetics was that expression patterns of core transcription factors are extraordinarily conserved in bilaterians. However, it remains unclear whether cis-regulatory elements of their target genes also exhibit common signatures associated with conserved embryoni...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1000912
更新日期:2010-04-15 00:00:00
abstract::XRN2 is a conserved 5'→3' exoribonuclease that complexes with proteins that contain XRN2-binding domains (XTBDs). In Caenorhabditis elegans (C. elegans), the XTBD-protein PAXT-1 stabilizes XRN2 to retain its activity. XRN2 activity is also promoted by 3'(2'),5'-bisphosphate nucleotidase 1 (BPNT1) through hydrolysis of...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1006313
更新日期:2016-09-15 00:00:00
abstract::In order to study the role played by cellular RNA pools produced by homologous genomic loci in defining the transcriptional state of a silenced gene, we tested the effect of non-functional alleles of the white gene in the presence of a functional copy of white, silenced by heterochromatin. We found that non-functional...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005444
更新日期:2015-08-20 00:00:00
abstract::The sterol regulatory element-binding protein (SREBP) family member SREBP1 is a critical transcriptional regulator of cholesterol and fatty acid metabolism and has been implicated in insulin resistance, diabetes, and other diet-related diseases. We globally identified the promoters occupied by SREBP1 and its binding p...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1000133
更新日期:2008-07-25 00:00:00
abstract::Mutations in the human LMNA gene cause muscular dystrophy by mechanisms that are incompletely understood. The LMNA gene encodes A-type lamins, intermediate filaments that form a network underlying the inner nuclear membrane, providing structural support for the nucleus and organizing the genome. To better understand t...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005231
更新日期:2015-05-21 00:00:00
abstract::Facioscapulohumeral dystrophy (FSHD) is an autosomal dominant muscular dystrophy in which no mutation of pathogenic gene(s) has been identified. Instead, the disease is, in most cases, genetically linked to a contraction in the number of 3.3 kb D4Z4 repeats on chromosome 4q. How contraction of the 4qter D4Z4 repeats c...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1000559
更新日期:2009-07-01 00:00:00
abstract::Qsp1 is a secreted quorum sensing peptide required for virulence of the fungal meningitis pathogen Cryptococcus neoformans. Qsp1 functions to control cell wall integrity in vegetatively growing cells and also functions in mating. Rather than acting on a cell surface receptor, Qsp1 is imported to act intracellularly vi...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1008744
更新日期:2020-09-21 00:00:00
abstract::Male breast cancer accounts for approximately 1% of all breast cancer. To date, risk factors for male breast cancer are poorly defined, but certain risk factors and genetic features appear common to both male and female breast cancer. Genome-wide association studies (GWAS) have recently identified common single nucleo...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1002290
更新日期:2011-09-01 00:00:00
abstract::A cascade of alternative sigma factors directs developmental gene expression during spore formation by the bacterium Bacillus subtilis. As the spore develops, a tightly regulated switch occurs in which the early-acting sigma factor σF is replaced by the late-acting sigma factor σG. The gene encoding σG (sigG) is trans...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1007350
更新日期:2018-04-27 00:00:00
abstract::Intestinal stem cell (ISC) self-renewal and proliferation are directed by Wnt/β-catenin signaling in mammals, whereas aberrant Wnt pathway activation in ISCs triggers the development of human colorectal carcinoma. Herein, we have utilized the Drosophila midgut, a powerful model for ISC regulation, to elucidate the mec...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005822
更新日期:2016-02-04 00:00:00
abstract::The major transition to eusociality required the evolution of a switch to canalize development into either a reproductive or a helper, the nature of which is currently unknown. Following predictions from the 'theory of facilitated variation', we identify sex differentiation pathways as promising candidates because of ...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1005952
更新日期:2016-03-31 00:00:00
abstract::Craniofacial abnormalities, including facial skeletal defects, comprise approximately one-third of all birth defects in humans. Since most bones in the face derive from cranial neural crest cells (CNCCs), which are multipotent stem cells, craniofacial bone disorders are largely attributed to defects in CNCCs. However,...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1007340
更新日期:2018-05-02 00:00:00
abstract::Chromatin assembly mutants accumulate recombinogenic DNA damage and are sensitive to genotoxic agents. Here we have analyzed why impairment of the H3K56 acetylation-dependent CAF1 and Rtt106 chromatin assembly pathways, which have redundant roles in H3/H4 deposition during DNA replication, leads to genetic instability...
journal_title:PLoS genetics
pub_type: 杂志文章
doi:10.1371/journal.pgen.1002376
更新日期:2011-11-01 00:00:00