Changes in the rumen microbiome and metabolites reveal the effect of host genetics on hybrid crosses.

abstract：:Magnetotactic bacteria are capable of aligning and swimming along the geomagnetic field lines; such a behaviour is called magnetotaxis. Previous studies reported that bacteria in the northern hemisphere migrate preferentially towards the North Pole of the Earth's magnetic field (north-seeking, NS), whereas those in th...

journal_title：Environmental microbiology reports

authors： Zhang WJ,Chen C,Li Y,Song T,Wu LF

更新日期：2010-10-01 00:00:00

abstract：:The TM6 phylum belongs to the so-called microbial dark matter that gathers uncultivated bacteria detected only via DNA sequencing. Recently, the genome sequence of a TM6 bacterium (TM6SC1) has led to suggest that this bacterium would adopt an endosymbiotic life. In the present paper, free-living amoebae bearing a TM6 ...

journal_title：Environmental microbiology reports

authors： Delafont V,Samba-Louaka A,Bouchon D,Moulin L,Héchard Y

更新日期：2015-12-01 00:00:00

abstract：:Free-living bacteria such as Pseudomonas putida are frequently exposed to temperature shifts and non-optimal growth conditions. We compared the transcriptome and metabolome of the cold adaptation of P. putida KT2440 and isogenic cold-sensitive transposon mutants carrying transposons in their cbrA, cbrB, pcnB, vacB, an...

journal_title：Environmental microbiology reports

authors： Dethlefsen S,Jäger C,Klockgether J,Schomburg D,Tümmler B

更新日期：2019-12-01 00:00:00

abstract：:Infection of honeybees by the microsporidian Nosema ceranae is considered to be one of the factors underlying the increased colony losses and decreased honey production seen in recent years. However, these effects appear to differ in function of the climatic zone, the distinct beekeeping practices and the honeybee spe...

journal_title：Environmental microbiology reports

authors： Van der Zee R,Gómez-Moracho T,Pisa L,Sagastume S,García-Palencia P,Maside X,Bartolomé C,Martín-Hernández R,Higes M

更新日期：2014-08-01 00:00:00

abstract：:Corals are inhabited by complex communities of microbes that affect their growth and survival. Several studies suggest that coral disease may be attributed to the success of vibrios in out-competing other bacteria in the mucus and tissues of corals. Vibrios utilize a variety of quorum sensing (QS) signal molecules to ...

journal_title：Environmental microbiology reports

authors： Tait K,Hutchison Z,Thompson FL,Munn CB

更新日期：2010-02-01 00:00:00

abstract：:Ectosymbiotic Nanoarchaeota live on the surface of diverse archaeal hosts. Despite being broadly distributed in global geothermal systems, only three Nanoarchaeota have been successfully co-cultivated with their hosts, and until now no nanoarchaeotal cultures or genomes have been described from deep-sea hydrothermal v...

journal_title：Environmental microbiology reports

authors： St John E,Flores GE,Meneghin J,Reysenbach AL

更新日期：2019-04-01 00:00:00

abstract：:Mycophagous (=fungus feeding) soil bacteria of the genus Collimonas have been shown to colonize and grow on hyphae of different fungal hosts as the only source of energy and carbon. The ability to exploit fungal nutrient resources might require a strategy for collimonads to sense fungi in the soil matrix. Oxalic acid ...

journal_title：Environmental microbiology reports

authors： Rudnick MB,van Veen JA,de Boer W

更新日期：2015-10-01 00:00:00

abstract：:In this study, an aquaporin protein, Aqp1, in Cryptococcus neoformans, which can lead either saprobic or parasitic lifestyles and causes life-threatening fungal meningitis was identified and characterized. AQP1 expression was rapidly induced (via the HOG pathway) by osmotic or oxidative stress. In spite of such transc...

journal_title：Environmental microbiology reports

authors： Meyers GL,Jung KW,Bang S,Kim J,Kim S,Hong J,Cheong E,Kim KH,Bahn YS

更新日期：2017-06-01 00:00:00

abstract：:Bacteria-host interactions are universal in nature and have significant effects on host functionality. Bacterial secondary metabolites are believed to play key roles in such interactions as well as in interactions within the host-associated microbial community. Hence, prominent secondary metabolite-producing bacteria ...

journal_title：Environmental microbiology reports

authors： Dittmann KK,Sonnenschein EC,Egan S,Gram L,Bentzon-Tilia M

更新日期：2019-06-01 00:00:00

abstract：:The extent to which different sequence-based approaches describe environmental microbial communities in comparative studies is an important consideration when deriving inferences from ecological studies. The ability of a targeted metagenomic approach [small subunit (SSU) rRNA pyrosequencing] and shotgun metagenome app...

journal_title：Environmental microbiology reports

authors： Steven B,Gallegos-Graves LV,Starkenburg SR,Chain PS,Kuske CR

更新日期：2012-04-01 00:00:00

abstract：:In field conditions, grapevine roots normally are colonized by arbuscular mycorrhizal fungi (AMF). However, little is published, from either morphological or molecular studies, on the species composition of these symbionts in production vineyards. The AMF biodiversity of two Piedmont vineyards (at Neive and Lessona), ...

journal_title：Environmental microbiology reports

authors： Balestrini R,Magurno F,Walker C,Lumini E,Bianciotto V

更新日期：2010-08-01 00:00:00

abstract：:Development of high-throughput sequencing techniques has greatly benefited our understanding about microbial ecology, yet the methods producing short reads suffer from species-level resolution and uncertainty of identification. Here, we optimize Pacific Biosciences-based metabarcoding protocols covering the internal t...

journal_title：Environmental microbiology reports

authors： Tedersoo L,Anslan S

更新日期：2019-10-01 00:00:00

abstract：:Bumblebees are ecologically and economically important as pollinators of crop and wild plants, especially in temperate systems. Species, such as the buff-tailed bumblebee (Bombus terrestris), are reared commercially to pollinate high-value crops. Their highly specific gut microbiota, characterized by low diversity, ma...

journal_title：Environmental microbiology reports

authors： Newbold LK,Oliver AE,Cuthbertson L,Walkington SE,Gweon HS,Heard MS,van der Gast CJ

更新日期：2015-08-01 00:00:00

abstract：:A fundamental question in marine microbial ecology is how microbes adapt to ocean environments. Although numerically dominant populations are typically considered more successful, higher census population sizes (Nc) do not equate directly to a greater capability for adaptation. Instead, effective population size (Ne) ...

journal_title：Environmental microbiology reports

authors： Luo H,Swan BK,Stepanauskas R,Hughes AL,Moran MA

更新日期：2014-04-01 00:00:00

abstract：:In the last few years, geomicrobiologists have focused their researches on the nature and origin of enigmatic reticulated filaments reported in modern and fossil samples from limestone caves and basalt lava tubes. Researchers have posed questions on these filaments concerning their nature, origin, chemistry, morpholog...

journal_title：Environmental microbiology reports

authors： Miller AZ,Hernández-Mariné M,Jurado V,Dionísio A,Barquinha P,Fortunato E,Afonso MJ,Chaminé HI,Saiz-Jimenez C

更新日期：2012-12-01 00:00:00

abstract：:The shallow submarine hydrothermal field of the Prony Bay (New Caledonia) discharges hydrogen- and methane-rich fluids with low salinity, temperature (< 40°C) and high pH (11) produced by the serpentinization reactions of the ultramafic basement into the lagoon seawater. They are responsible for the formation of carbo...

journal_title：Environmental microbiology reports

authors： Quéméneur M,Bes M,Postec A,Mei N,Hamelin J,Monnin C,Chavagnac V,Payri C,Pelletier B,Guentas-Dombrowsky L,Gérard M,Pisapia C,Gérard E,Ménez B,Ollivier B,Erauso G

更新日期：2014-12-01 00:00:00

abstract：:Marine cyanobacteria are important contributors to primary production in the ocean and their viruses (cyanophages) affect the ocean microbial communities. Despite reports of lysogeny in marine cyanobacteria, a genome sequence of such temperate cyanophages remains unknown although genomic analysis indicate potential fo...

journal_title：Environmental microbiology reports

authors： Flores-Uribe J,Philosof A,Sharon I,Fridman S,Larom S,Béjà O

更新日期：2019-08-01 00:00:00

abstract：:Relationships fueled by sulfide between deep-sea invertebrates and bacterial symbionts are well known, yet the diverse overlapping factors influencing symbiont specificity are complex. For animals that obtain their symbionts from the environment, both host identity and geographic location can impact the ultimate symbi...

journal_title：Environmental microbiology reports

authors： Brzechffa C,Goffredi SK

更新日期：2020-11-16 00:00:00

abstract：:The production of hydrogen (H2) is an inherent component of biological dinitrogen (N2) fixation, and there have been several studies quantifying H2 production relative to N2 fixation in cultures of diazotrophs. However, conducting the relevant measurements for a field population is more complex as shown by this study ...

journal_title：Environmental microbiology reports

authors： Wilson ST,del Valle DA,Robidart JC,Zehr JP,Karl DM

更新日期：2013-10-01 00:00:00

abstract：:Magnetotactic bacteria (MTB) are distributed ubiquitously in sediments from coastal environments to the deep sea. The Pacific Manganese Nodule Province contains numerous polymetallic nodules mainly composed of manganese, iron, cobalt, copper and nickel. In the present study we used Illumina MiSeq sequencing technology...

journal_title：Environmental microbiology reports

authors： Dong Y,Li J,Zhang W,Zhang W,Zhao Y,Xiao T,Wu LF,Pan H

更新日期：2016-04-01 00:00:00

abstract：:To assess the role of open-ocean ecosystems in global CO2 fixation, we investigated how picophytoplankton, which dominate primary production, responded to episodic increases in nutrient availability. Previous experiments have shown nitrogen alone, or in combination with phosphorus or iron, to be the proximate limiting...

journal_title：Environmental microbiology reports

authors： Grob C,Jardillier L,Hartmann M,Ostrowski M,Zubkov MV,Scanlan DJ

更新日期：2015-04-01 00:00:00

abstract：:Amphibians are in decline as a result of habitat destruction, climate change and infectious diseases. Tadpoles are thought susceptible to infections because they are dependent on only an innate immune system (e.g. macrophages). This is because the frog adaptive immune system does not function until later stages of the...

journal_title：Environmental microbiology reports

authors： Chambouvet A,Valigurová A,Pinheiro LM,Richards TA,Jirků M

更新日期：2016-10-01 00:00:00

abstract：:Haplodiploidy is a sex determination system in which fertilized diploid eggs develop into females and unfertilized haploid eggs develop into males. The evolutionary explanations for this phenomenon include the possibility that haplodiploidy can be reinforced by infection with endosymbiotic bacteria, such as Wolbachia....

journal_title：Environmental microbiology reports

authors： Kawasaki Y,Schuler H,Stauffer C,Lakatos F,Kajimura H

更新日期：2016-10-01 00:00:00

abstract：:In complex environments such as cheeses, the lack of relevant information on the physiology and virulence expression of pathogenic bacteria and the impact of endogenous microbiota has hindered progress in risk assessment and control. Here, we investigated the behaviour of Staphylococcus aureus, a major foodborne patho...

journal_title：Environmental microbiology reports

authors： Cretenet M,Nouaille S,Thouin J,Rault L,Stenz L,François P,Hennekinne JA,Piot M,Maillard MB,Fauquant J,Loubière P,Le Loir Y,Even S

更新日期：2011-06-01 00:00:00

abstract：:Antarctic terrestrial ecosystems are largely dominated by lichens, while shallow coastal environments are mainly covered by macroalgae. The aim of this study was to isolate and to evaluate the diversity of yeasts in different species of macroalgae and lichens collected in South Shetland Islands, Antarctica. A total of...

journal_title：Environmental microbiology reports

authors： Duarte AWF,Passarini MRZ,Delforno TP,Pellizzari FM,Cipro CVZ,Montone RC,Petry MV,Putzke J,Rosa LH,Sette LD

更新日期：2016-10-01 00:00:00

abstract：:The community composition of bacteria with highly dynamic abundance and activity was observed to be with low variability in a shallow lake sediment with frequent physical disturbance. This suggests that physical disturbance did not create more niches and did not lead to highly variable bacterial community. The major p...

journal_title：Environmental microbiology reports

authors： Tšertova N,Kisand A,Tammert H,Kisand V

更新日期：2011-04-01 00:00:00

abstract：:The metabolism of cholesterol in Mycobacterium smegmatis mc(2) 155 has been investigated by using a microarray approach. The transcriptome of M. smegmatis growing in cholesterol was compared with that of cells growing in glycerol as the sole carbon and energy sources during the middle exponential phase. Microarray ana...

journal_title：Environmental microbiology reports

authors： Uhía I,Galán B,Kendall SL,Stoker NG,García JL

更新日期：2012-04-01 00:00:00

abstract：:Bacterioplankton play a critical role in primary production, carbon cycling, and nutrient cycling in the oligotrophic ocean. To investigate the effect of elevated CO2 and warming on the composition and function of bacterioplankton communities in oligotrophic waters, we performed two trace-metal clean deck board incuba...

journal_title：Environmental microbiology reports

authors： Allen R,Hoffmann LJ,Law CS,Summerfield TC

更新日期：2020-08-01 00:00:00

abstract：:The role of methane-oxidizing bacteria (MOB) in alpine environments is poorly understood, but is of importance given the abundance of alpine environments and the role of MOB in the global carbon cycle. Using a combination of approaches we examined both seasonal and land usage effects on the ecology of microbial methan...

journal_title：Environmental microbiology reports

authors： Abell GC,Stralis-Pavese N,Sessitsch A,Bodrossy L

更新日期：2009-10-01 00:00:00

abstract：:Alexandrium catenella, a marine dinoflagellate responsible for harmful algal blooms (HABs), proliferates with greater frequency, distribution and intensity, in disturbed marine coastal ecosystems. The proteins secreted into seawater may play a crucial role in maintaining this dinoflagellate in these ecosystems, but th...

journal_title：Environmental microbiology reports

authors： Chetouhi C,Laabir M,Masseret E,Jean N

更新日期：2019-08-01 00:00:00