Abstract:
:Nitrogen (N), as an essential element in amino acids, nucleotides, and proteins, is a key factor in plant growth and development. Omics approaches such as metabolomics and transcriptomics have become a promising way to inspect complex network interactions in N metabolism and can be used for monitoring the uptake and regulation, translocation, and remobilization of N. In this review, the authors highlight recent progress in omics approaches, including transcript profiling using microarrays and deep sequencing, and show recent technical developments in metabolite profiling for N studies. Further, network analysis studies including network inference methods with correlations, information-theoretic measures, and a network concept to examine gene expression clusters in relation to N regulatory systems in plants are introduced, and integrating network inference methods and integrated networks using multiple omics data are discussed. Finally, this review summarizes recent omics application examples using metabolite and/or transcript profiling analysis to elucidate the regulation of N metabolism and signalling and the coordination of N and carbon metabolism in model plants (Arabidopsis and rice), crops (tomato, maize, and legumes), and trees (Populus).
journal_name
J Exp Botjournal_title
Journal of experimental botanyauthors
Fukushima A,Kusano Mdoi
10.1093/jxb/eru322subject
Has Abstractpub_date
2014-10-01 00:00:00pages
5619-30issue
19eissn
0022-0957issn
1460-2431pii
eru322journal_volume
65pub_type
杂志文章,评审abstract::Producing more food per unit of water has never been as important as it is at present, and the demand for water by economic sectors other than agriculture will necessarily put a great deal of pressure on a dwindling resource, leading to a call for increases in the productivity of water in agriculture. This topic has b...
journal_title:Journal of experimental botany
pub_type: 杂志文章,评审
doi:10.1093/jxb/eru040
更新日期:2014-11-01 00:00:00
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journal_title:Journal of experimental botany
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journal_title:Journal of experimental botany
pub_type: 杂志文章
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journal_title:Journal of experimental botany
pub_type: 杂志文章
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更新日期:2020-11-08 00:00:00
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journal_title:Journal of experimental botany
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erv529
更新日期:2016-03-01 00:00:00
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更新日期:1997-03-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/ert039
更新日期:2013-04-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
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更新日期:2014-04-01 00:00:00
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pub_type: 杂志文章
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更新日期:2001-07-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
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更新日期:2019-06-28 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erj214
更新日期:2006-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erw223
更新日期:2016-07-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章,评审
doi:10.1093/jxb/erw399
更新日期:2016-12-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erl120
更新日期:2006-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/eru094
更新日期:2014-07-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/ery432
更新日期:2019-02-05 00:00:00
abstract::In maize, water stress at flowering causes loss of kernel set and productivity. While changes in the levels of sugars and abscisic acid (ABA) are thought to play a role in this stress response, the mechanistic basis and genes involved are not known. A candidate gene approach was used with association mapping to identi...
journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erq308
更新日期:2011-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/ert085
更新日期:2013-05-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
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更新日期:2021-01-23 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/ern061
更新日期:2008-01-01 00:00:00
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pub_type: 杂志文章
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更新日期:2019-08-07 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章,评审
doi:10.1093/jxb/erj040
更新日期:2006-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:
更新日期:2001-08-01 00:00:00
abstract::SPICK2, a homologue of the weakly-inward-rectifying Shaker-like Arabidopsis K channel, AKT2, is a candidate K+-influx channel participating in light- and clock-regulated leaf movements of the legume, Samanea saman. Light and the biological clock regulate the in situ K+-influx channel activity differentially in extenso...
journal_title:Journal of experimental botany
pub_type: 杂志文章
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更新日期:2006-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
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更新日期:2006-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erv186
更新日期:2015-07-01 00:00:00
abstract::Cytoplasmic male sterile (CMS) rice has been widely used for hybrid rice seed production in China. However, CMS rice suffers from undesirable flowering habits including scattered floret opening time (FOT), which causes different FOTs among parental rice plants and greatly reduces hybrid rice seed production. Little is...
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journal_title:Journal of experimental botany
pub_type: 杂志文章,评审
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更新日期:2013-01-01 00:00:00
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journal_title:Journal of experimental botany
pub_type: 杂志文章
doi:10.1093/jxb/erf071
更新日期:2002-11-01 00:00:00