当前位置： SCI文献检索 > MOLECULAR PHYLOGENETICS AND EVOLUTION期刊下所有文献 > A phylogeny of Adelanthaceae (Jungermanniales, Marchantiophyta) based on nuclear and chloroplast DNA markers, with comments on classification, cryptic speciation and biogeography.

A phylogeny of Adelanthaceae (Jungermanniales, Marchantiophyta) based on nuclear and chloroplast DNA markers, with comments on classification, cryptic speciation and biogeography.

Abstract：

:Adelanthaceae (including Jamesoniellaceae) represent a major lineage of jungermannialean liverworts that is characterized by ventral-intercalary, often flagelliform branches, succubous leaves, ovoid to cylindrical, plicate perianths with a contracted mouth, often connate bracts and bracteoles, and 4-7 stratose capsule walls. Here we present the first comprehensive molecular phylogeny of Adelanthaceae using five markers (rbcL, psbA, trnL-trnF region, atpB-rbcL spacer, nrITS1-5.8S-ITS2) and 108 accessions from throughout the geographic range of the family. The molecular data support the separation of subfamilies Adelanthoideae and Jamesonielloideae. The Adelanthoideae include the genera Adelanthus, Pseudomarsupidium and Wettsteinia. The Jamesonielloideae include representatives of the genera Anomacaulis, Cryptochila, Cuspidatula, Jamesoniella, and Syzygiella in five main clades. The monophyly of taxa in current morphological classification schemes of Jamesonielloideae is not supported by the molecular data. Based on the outcome of the molecular phylogenetic analyses we propose to include Anomacaulis and Jamesoniella kirkii in Cuspidatula, and to place Cryptochila, Roivainenia, and Jamesoniella in the synonymy of Syzygiella. Molecular data support intercontinental ranges for several species and a range formation of Adelanthaceae by frequent short-distance dispersal, rare long-distance dispersal, extinction, and diversification. Disjunct distribution patterns within the Adelanthaceae cannot be explained by Gondwanan vicariance.

journal_name

Mol Phylogenet Evol

journal_title

Molecular phylogenetics and evolution

authors

Feldberg K,Váňa J,Long DG,Shaw AJ,Hentschel J,Heinrichs J

doi

10.1016/j.ympev.2009.11.009

subject

Has Abstract

pub_date

2010-04-01 00:00:00

pages

293-304

issue

1

eissn

1055-7903

issn

1095-9513

pii

S1055-7903(09)00456-4

journal_volume

55

pub_type

杂志文章

相关文献

MOLECULAR PHYLOGENETICS AND EVOLUTION文献大全
  • Origin of a novel regulatory module by duplication and degeneration of an ancient plant transcription factor.

    abstract：:It is commonly believed that gene duplications provide the raw material for morphological evolution. Both the number of genes and size of gene families have increased during the diversification of land plants. Several small proteins that regulate transcription factors have recently been identified in plants, including...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.06.017

    authors： Floyd SK,Ryan JG,Conway SJ,Brenner E,Burris KP,Burris JN,Chen T,Edger PP,Graham SW,Leebens-Mack JH,Pires JC,Rothfels CJ,Sigel EM,Stevenson DW,Neal Stewart C Jr,Wong GK,Bowman JL

    更新日期：2014-12-01 00:00:00

  • Multigenic phylogeographic divergence in the paleoendemic southern Appalachian opilionid Fumontana deprehendor Shear (Opiliones, Laniatores, Triaenonychidae).

    abstract：:The paleoendemic opilionid Fumontana deprehendor is restricted to a small area of mid-elevation forested habitats in the southern Blue Ridge province of the Appalachian Mountains. In a recent study we reported on the discovery of 22 new montane populations of this monotypic genus, specimens from which exhibit remarkab...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.10.013

    authors： Thomas SM,Hedin M

    更新日期：2008-02-01 00:00:00

  • The structure and evolution of the ribosomal proteins encoded in the spc operon of the archaeon (Crenarchaeota) Sulfolobus acidocaldarius.

    abstract：:The genes for nine ribosomal proteins, L24, L5, S14, S8, L6, L18, S5, L30, and L15, have been isolated and sequenced from the spc operon in the archaeon (Crenarchaeota) Sulfolobus acidocaldarius, and the putative amino acid sequence of the proteins coded by these genes has been determined. In addition, three other gen...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.1998.0607

    authors： Yang D,Kusser I,Köpke AK,Koop BF,Matheson AT

    更新日期：1999-07-01 00:00:00

  • Evidence for cryptic diversification in a rupicolous forest-dwelling gecko (Gekkonidae: Afroedura pondolia) from a biodiversity hotspot.

    abstract：:We assess the phylogeographic structure and test several species delimitation methods in the forest-living Pondo flat-gecko, Afroedura pondolia, by sampling specimens from across the entire distribution in the Eastern Cape and KwaZulu-Natal provinces of South Africa. Phylogenetic results, using Bayesian inferences and...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2019.106549

    authors： Busschau T,Conradie W,Daniels SR

    更新日期：2019-10-01 00:00:00

  • Raising names from the dead: A time-calibrated phylogeny of frog shells (Bursidae, Tonnoidea, Gastropoda) using mitogenomic data.

    abstract：:With 59 Recent species, Bursidae, known as «frog shells», are a small but widely distributed group of tropical and subtropical gastropods that are most diverse in the Indo-West Pacific. The present study is aimed at reconstructing phylogenetic relationships of bursid gastropods based on extensive and representative ta...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2020.107040

    authors： Sanders MT,Merle D,Laurin M,Bonillo C,Puillandre N

    更新日期：2021-03-01 00:00:00

  • Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes.

    abstract：:Members of the AP1/SQUA subfamily of plant MADS-box genes play broad roles in the regulation of reproductive meristems, the specification of sepal and petal identities, and the development of leaves and fruits. It has been shown that AP1/SQUA-like genes are angiosperm-specific, and have experienced several major dupli...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.02.016

    authors： Shan H,Zhang N,Liu C,Xu G,Zhang J,Chen Z,Kong H

    更新日期：2007-07-01 00:00:00

  • Molecular phylogenetics of 'river dolphins' and the baiji mitochondrial genome.

    abstract：:It is well known that the classical river dolphins are not a natural group, but up to now the phylogenetic relationships among them are not very clear because different views have been referred from different studies. In the present study, we determined the complete nucleotide sequence of the mitochondrial (mt) genome...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2005.06.009

    authors： Yan J,Zhou K,Yang G

    更新日期：2005-12-01 00:00:00

  • Using phylogenomics to reconstruct phylogenetic relationships within tribe Polygonateae (Asparagaceae), with a special focus on Polygonatum.

    abstract：:Polygonatum is a widespread temperate genus with approximately 75 species centered in the Eastern Himalaya and Indo-Burma biodiversity hotspots. A complete assessment of the remarkable diversity of Polygonatum in these areas requires an accurate circumscription of the genus, as well as a clear understanding of generic...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2018.08.017

    authors： Floden A,Schilling EE

    更新日期：2018-12-01 00:00:00

  • Molecular phylogenetics and biogeography of Lepus in Eastern Asia based on mitochondrial DNA sequences.

    abstract：:In spite of several classification attempts among taxa of the genus Lepus, phylogenetic relationships still remain poorly understood. Here, we present molecular genetic evidence that may resolve some of the current incongruities in the phylogeny of the leporids. The complete mitochondrial cytb, 12S genes, and parts of...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2005.05.006

    authors： Wu C,Wu J,Bunch TD,Li Q,Wang Y,Zhang YP

    更新日期：2005-10-01 00:00:00

  • Towards a molecular phylogeny of Mollusks: bivalves' early evolution as revealed by mitochondrial genes.

    abstract：:Despite huge fossil, morphological and molecular data, bivalves' early evolutionary history is still a matter of debate: recently, established phylogeny has been mostly challenged by DNA studies, and little agreement has been reached in literature, because of a substantial lack of widely-accepted methodological approa...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2010.08.032

    authors： Plazzi F,Passamonti M

    更新日期：2010-11-01 00:00:00

  • Molecular phylogenetic analysis of methylenetetrahydrofolate reductase family of proteins.

    abstract：:Methylenetetrahydrofolate reductase (MTHFR) family of proteins catalyze the conversion of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate. They contain a flavin adenine dinucleotide (FAD) as the cofactor and the enzyme in eukaryotes, except in yeast, is known to be allosterically regulated by S-adenosylmeth...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2006.09.020

    authors： Kasap M,Sazci A,Ergul E,Akpinar G

    更新日期：2007-03-01 00:00:00

  • Phylogeography of a morphologically diverse Neotropical montane species, the Common Bush-Tanager (Chlorospingus ophthalmicus).

    abstract：:The Common Bush-Tanager (Chlorospingus ophthalmicus) is distributed in Neotropical cloud-forests from Mexico to Argentina and contains 25 subspecies divided into eight subspecies groups based on biogeography, eye coloration, presence of a postocular spot and chest band. All of Central America is occupied by a single s...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2008.02.004

    authors： Weir JT,Bermingham E,Miller MJ,Klicka J,González MA

    更新日期：2008-05-01 00:00:00

  • Biogeography and diversification dynamics of the African woodpeckers.

    abstract：:The dynamics of species accumulation of African terrestrial vertebrates over time remains underexplored in comparison with those in the New World, despite Africa hosting about 25% of the world's avian diversity. This lack of knowledge hampers our understanding of the fundamental processes that drive biodiversity and t...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2017.01.007

    authors： Fuchs J,Pons JM,Bowie RC

    更新日期：2017-03-01 00:00:00

  • The evolution of nuclear receptors: evidence from the coral Acropora.

    abstract：:We have amplified and sequenced PCR products derived from 10 nuclear receptor (NR) genes from the anthozoan cnidarian Acropora millepora, including five products corresponding to genes not previously reported from the phylum Cnidaria. cDNAs corresponding to seven of these products were sequenced and at least three enc...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.2001.0994

    authors： Grasso LC,Hayward DC,Trueman JW,Hardie KM,Janssens PA,Ball EE

    更新日期：2001-10-01 00:00:00

  • A multi-gene phylogeny of Clavicipitaceae (Ascomycota, Fungi): identification of localized incongruence using a combinational bootstrap approach.

    abstract：:Multi-gene phylogenetic analyses were conducted to address the evolution of Clavicipitaceae (Ascomycota). Data are presented here for approximately 5900 base pairs from portions of seven loci: the nuclear ribosomal small and large subunit DNA (nrSSU and nrLSU), beta-tubulin, elongation factor 1alpha (EF-1alpha), the l...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.03.011

    authors： Sung GH,Sung JM,Hywel-Jones NL,Spatafora JW

    更新日期：2007-09-01 00:00:00

  • Nuclear and mitochondrial diversification in two native California minnows: insights into taxonomic identity and regional phylogeography.

    abstract：:Diversification of the California icthyofauna has been greatly influenced by a complex geomorphological history and past fluctuations in climate regimes. This complex history has resulted in areas of high endemism for a number of taxa. Here we present data on the two species in the genus Lavinia, the California roach ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2008.11.028

    authors： Aguilar A,Jones WJ

    更新日期：2009-05-01 00:00:00

  • Species-level diversification of African dwarf crocodiles (Genus Osteolaemus): a geographic and phylogenetic perspective.

    abstract：:The taxonomy of the African dwarf crocodile (genus Osteolaemus) has been disputed since a novel morphotype was discovered in the early 20th Century. Because this poorly-known reptile is widely hunted throughout the forests of Central and West Africa, resolving the existence and extent of taxonomic units has important ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2008.11.009

    authors： Eaton MJ,Martin A,Thorbjarnarson J,Amato G

    更新日期：2009-03-01 00:00:00

  • The polyphyletic genus Sebaea (Gentianaceae): a step forward in understanding the morphological and karyological evolution of the Exaceae.

    abstract：:Within the Gentianaceae-Exaceae, the most species-rich genus Sebaea has received very little attention in terms of phylogenetic or karyological investigations. As a result, the exact number of species remains vague and the relationships with the other members of the Exaceae poorly understood. In this paper, we provide...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.07.025

    authors： Kissling J,Yuan YM,Küpfer P,Mansion G

    更新日期：2009-12-01 00:00:00

  • Hunting the wolf: A molecular phylogeny of the wolf spiders (Araneae, Lycosidae).

    abstract：:Lycosids are a diverse family of spiders distributed worldwide. Previous studies recovered some of the deeper splits of the family, but with little support. We present a broad phylogenetic analysis of the Lycosidae including a wide geographic sampling of representatives and all the subfamilies described to date. Addit...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2019.04.004

    authors： Piacentini LN,Ramírez MJ

    更新日期：2019-07-01 00:00:00

  • Evolutionary dynamics of a cycad obligate pollination mutualism - Pattern and process in extant Macrozamia cycads and their specialist thrips pollinators.

    abstract：:Obligate pollination mutualisms are rare and few have been investigated deeply. This paper focuses on one such mutualism involving thrips in the genus Cycadothrips that pollinate cycads in the genus Macrozamia. Both represent old lineages relative to insects and plants generally, are endemic to Australia, and are mutu...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.07.003

    authors： Brookes DR,Hereward JP,Terry LI,Walter GH

    更新日期：2015-12-01 00:00:00

  • Phylogenetic reconstruction of the wolf spiders (Araneae: Lycosidae) using sequences from the 12S rRNA, 28S rRNA, and NADH1 genes: implications for classification, biogeography, and the evolution of web building behavior.

    abstract：:Current knowledge of the evolutionary relationships amongst the wolf spiders (Araneae: Lycosidae) is based on assessment of morphological similarity or phylogenetic analysis of a small number of taxa. In order to enhance the current understanding of lycosid relationships, phylogenies of 70 lycosid species were reconst...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2005.09.004

    authors： Murphy NP,Framenau VW,Donnellan SC,Harvey MS,Park YC,Austin AD

    更新日期：2006-03-01 00:00:00

  • Towards a species level tree of the globally diverse genus Chenopodium (Chenopodiaceae).

    abstract：:Chenopodium is a large and morphologically variable genus of annual and perennial herbs with an almost global distribution. All subgenera and most sections of Chenopodium were sampled along with other genera of Chenopodieae, Atripliceae and Axyrideae across the subfamily Chenopodioideae (Chenopodiaceae), totalling to ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2011.10.006

    authors： Fuentes-Bazan S,Mansion G,Borsch T

    更新日期：2012-01-01 00:00:00

  • Mitochondrial and nuclear multilocus phylogeny of Rhipicephalus ticks from Kenya.

    abstract：:The morphological diversity of African ticks of the genus Rhipicephalus and subgenus Boophilus have been studied in detail. However, their taxonomy remains poorly resolved with limited molecular studies performed to improve inter-species discrimination. Herein, ribosomal cytochrome c oxidase I (COI), 12S ribosomal DNA...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2019.106579

    authors： Kanduma EG,Bishop RP,Githaka NW,Skilton RA,Heyne H,Mwacharo JM

    更新日期：2019-11-01 00:00:00

  • Phylogeography of Helleria brevicornis (Crustacea, Oniscidea): old and recent differentiations of an ancient lineage.

    abstract：:Helleria brevicornis has a disjunct, peri-Tyrrhenian distribution that mirrors that of several organisms, for which geographic vicariance is invoked, due to the geological events started with the Oligocene split of the Sardo-Corsican microplate from the Pyrenees, and successive separation between Sardinia and Corsica....

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.10.005

    authors： Gentile G,Campanaro A,Carosi M,Sbordoni V,Argano R

    更新日期：2010-02-01 00:00:00

  • Cytochrome b sequences reveal Acomys minous (Rodentia, Muridae) paraphyly and answer the question about the ancestral karyotype of Acomys dimidiatus.

    abstract：:Sequences of the cytochrome b (cyt b) mitochondrial gene show that the spiny mouse Acomys from Crete, known as the endemic species A. minous, is composed of two distinct maternal lineages ("A" and "B"). Group "A" sequences cluster with A. nesiotes (Cyprus) and group "B" sequences cluster with A. cilicicus (Turkey), wh...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.2000.0859

    authors： Barome PO,Lymberakis P,Monnerot M,Gautun JC

    更新日期：2001-01-01 00:00:00

  • Plio-Pleistocene diversification and biogeographic barriers in southern Australia reflected in the phylogeography of a widespread and common lizard species.

    abstract：:Palaeoclimatic events and biogeographical processes since the mid-Tertiary have played an important role in shaping the evolution and distribution of Australian fauna. However, their impacts on fauna in southern and arid zone regions of Australia are not well understood. Here we investigate the phylogeography of an Au...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2018.12.014

    authors： Ansari MH,Cooper SJB,Schwarz MP,Ebrahimi M,Dolman G,Reinberger L,Saint KM,Donnellan SC,Bull CM,Gardner MG

    更新日期：2019-04-01 00:00:00

  • A phylogenetic hypothesis for the recently diversified Ruschieae (Aizoaceae) in southern Africa.

    abstract：:The Ruschieae is a large tribe of about 1600 species of succulent perennials. They form a major component of the arid parts of the Greater Cape Floristic Region, both in numbers of species and in their density of coverage. So far phylogenetic relationships within the tribe have been unresolved, largely through the pau...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2013.05.030

    authors： Klak C,Bruyns PV,Hanáček P

    更新日期：2013-12-01 00:00:00

  • Multilocus species-delimitation in the Xerotyphlops vermicularis (Reptilia: Typhlopidae) species complex.

    abstract：:Scolecophidia (worm snakes) are a vertebrate group with high ecomorphological conservatism due to their burrowing lifestyle. The Eurasian or Greek blindsnake Xerotyphlops vermicularis is their only European representative, a species-complex with an old diversification history. However, its systematics and taxonomy has...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2020.106922

    authors： Kornilios P,Jablonski D,Sadek RA,Kumlutaş Y,Olgun K,Avci A,Ilgaz C

    更新日期：2020-11-01 00:00:00

  • Phylogenetic relationships, subdivision, and biogeography of the cyprinid tribe Labeonini (sensu) (Teleostei: Cypriniformes), with comments on the implications of lips and associated structures in the labeonin classification.

    abstract：:The Labeonini (sensu Rainboth, 1991) is a tribe of the subfamily Cyprininae, the largest subfamily of Cypriniformes. With around 400 species in 34 genera, this tribe is widely distributed in the freshwaters of tropical Africa and Asia. Most species are adapted to fast-flowing streams and rivers, and exhibit unique mor...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.09.027

    authors： Yang L,Mayden RL

    更新日期：2010-01-01 00:00:00

  • Phylogeny and biogeography of Alangiaceae (Cornales) inferred from DNA sequences, morphology, and fossils.

    abstract：:Alangiaceae, in the basal Asterid clade Cornales, consists of only one genus, Alangium. The genus has approximately 24 species distributed mainly in tropical and subtropical regions of the Old World and is well represented in the Tertiary fossil record of the northern hemisphere. We conducted phylogenetic and biogeogr...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.01.017

    authors： Feng CM,Manchester SR,Xiang QY

    更新日期：2009-05-01 00:00:00