当前位置： SCI文献检索 > MOLECULAR PHYLOGENETICS AND EVOLUTION期刊下所有文献 > Phylogeography of a morphologically diverse Neotropical montane species, the Common Bush-Tanager (Chlorospingus ophthalmicus).

Phylogeography of a morphologically diverse Neotropical montane species, the Common Bush-Tanager (Chlorospingus ophthalmicus).

Abstract：

:The Common Bush-Tanager (Chlorospingus ophthalmicus) is distributed in Neotropical cloud-forests from Mexico to Argentina and contains 25 subspecies divided into eight subspecies groups based on biogeography, eye coloration, presence of a postocular spot and chest band. All of Central America is occupied by a single subspecies group; whereas the Andes are believed to be occupied by seven additional subspecies groups. We used five mitochondrial genes to investigate the phylogeography and possible species limits of the ophthalmicus complex. A total of 14 monophyletic lineages were uncovered within the ophthalmicus complex, including three clades currently classified as separate species (C. semifuscus, inornatus and tacarcunae). Divergence estimates for these clades date between 0.8 and 5.2 million years ago (Ma). Contrary to expectations based on morphological diversity, phylogeographic structure was greatest in Mexico and Central America and weakest in the Andes. Morphological and genetic divergences were not significantly correlated and most morphologically defined subspecies groups were not supported. Our evidence suggests the ophthalmicus complex originated in Mexico ca. 6.0 Ma (million years ago) and spread south into the Andes ca. 4.7 Ma before the completion of the Isthmus of Panama. Three genetically divergent lineages of ophthalmicus that formed in the Andes possess a complex checkerboard distribution, with a single lineage represented by disjunct populations from Venezuela and the southern Andes, while intervening populations in Ecuador and Central Peru form two genetically and morphologically divergent lineages.

journal_name

Mol Phylogenet Evol

journal_title

Molecular phylogenetics and evolution

authors

Weir JT,Bermingham E,Miller MJ,Klicka J,González MA

doi

10.1016/j.ympev.2008.02.004

subject

Has Abstract

pub_date

2008-05-01 00:00:00

pages

650-64

issue

2

eissn

1055-7903

issn

1095-9513

pii

S1055-7903(08)00065-1

journal_volume

47

pub_type

杂志文章

相关文献

MOLECULAR PHYLOGENETICS AND EVOLUTION文献大全
  • Multigenic phylogeographic divergence in the paleoendemic southern Appalachian opilionid Fumontana deprehendor Shear (Opiliones, Laniatores, Triaenonychidae).

    abstract：:The paleoendemic opilionid Fumontana deprehendor is restricted to a small area of mid-elevation forested habitats in the southern Blue Ridge province of the Appalachian Mountains. In a recent study we reported on the discovery of 22 new montane populations of this monotypic genus, specimens from which exhibit remarkab...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.10.013

    authors： Thomas SM,Hedin M

    更新日期：2008-02-01 00:00:00

  • Molecular phylogenetics and character evolution of the "sacaca" clade: novel relationships of Croton section Cleodora (Euphorbiaceae).

    abstract：:Phylogenetic relationships of Croton section Cleodora (Klotzsch) Baill. were evaluated using the nuclear ribosomal ITS and the chloroplast trnL-F and trnH-psbA regions. Our results show a strongly supported clade containing most previously recognized section Cleodora species, plus some other species morphologically si...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2011.04.013

    authors： Caruzo MB,van Ee BW,Cordeiro I,Berry PE,Riina R

    更新日期：2011-08-01 00:00:00

  • Biogeography and speciation of a direct developing frog from the coastal arid zone of Western Australia.

    abstract：:Within the southwestern Australian biodiversity hotspot, the Shark Bay region displays high levels of plant and animal endemism, particularly in the herpetofauna. The region has been subjected to dramatic climatic fluctuations and has been geologically active from the Late Miocene to the present. The myobatrachid frog...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.05.023

    authors： Edwards DL

    更新日期：2007-11-01 00:00:00

  • Phylogenetic analyses provide insights into the historical biogeography and evolution of Brachyrhaphis fishes.

    abstract：:The livebearing fish genus Brachyrhaphis (Poeciliidae) has become an increasingly important model in evolution and ecology research, yet the phylogeny of this group is not well understood, nor has it been examined thoroughly using modern phylogenetic methods. Here, we present the first comprehensive phylogenetic analy...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.04.013

    authors： Ingley SJ,Reina RG,Bermingham E,Johnson JB

    更新日期：2015-08-01 00:00:00

  • Sequence and secondary structure comparisons of ITS rDNA in mosquitoes (Diptera: Culicidae).

    abstract：:Sequences of the internal transcribed spacers (ITS1 and ITS2) of the mosquito Aedes aegypti, and the ITS2 of six related species, A. simpsoni, A. albopictus, A. vexans, A. triseriatus, Haemagogus mesodentatus, and Psorophora ferox are reported. Intraspecific variation in A. aegypti ITS1 is 1.07% among four clones from...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/1055-7903(92)90001-w

    authors： Wesson DM,Porter CH,Collins FH

    更新日期：1992-12-01 00:00:00

  • Variation in ribosomal and mitochondrial DNA sequences demonstrates the existence of intraspecific groups in Paramecium multimicronucleatum (Ciliophora, Oligohymenophorea).

    abstract：:This is the first phylogenetic study of the intraspecific variability within Paramecium multimicronucleatum with the application of two-loci analysis (ITS1-5.8S-ITS2-5'LSU rDNA and COI mtDNA) carried out on numerous strains originated from different continents. The species has been shown to have a complex structure of...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2012.01.024

    authors： Tarcz S,Potekhin A,Rautian M,Przyboś E

    更新日期：2012-05-01 00:00:00

  • Phylogenetic analysis of the Argonaute protein family in platyhelminths.

    abstract：:Argonaute proteins (AGOs) are mediators of gene silencing via recruitment of small regulatory RNAs to induce translational regression or degradation of targeted molecules. Platyhelminths have been reported to express microRNAs but the diversity of AGOs in the phylum has not been explored. Phylogenetic relationships of...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2012.11.014

    authors： Zheng Y

    更新日期：2013-03-01 00:00:00

  • A molecular phylogenetic analysis of the vampire moths and their fruit-piercing relatives (Lepidoptera: Erebidae: Calpinae).

    abstract：:Within butterflies and moths, adult hematophagy is limited to species within the vampire moth genus Calyptra. These moths are placed within the subfamily Calpinae, whose other members are known to exhibit a broad range of feeding behaviors including those that can be considered 'piercers' of fruits or other hosts and ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2012.06.029

    authors： Zaspel JM,Zahiri R,Hoy MA,Janzen D,Weller SJ,Wahlberg N

    更新日期：2012-11-01 00:00:00

  • Multi-locus DNA sequence variation in a complex of four leaf beetle species with parapatric distributions: mitochondrial and nuclear introgressions reveal recent hybridization.

    abstract：:While the importance for including multiple independent loci in phylogeographic studies is largely acknowledged, a majority of these still focus on a single species. We combine the study of multilocus DNA sequence variation (one mitochondrial and four unlinked nuclear fragments) at both the inter- and intraspecific le...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.05.003

    authors： Quinzin MC,Mardulyn P

    更新日期：2014-09-01 00:00:00

  • In the shadows: Phylogenomics and coalescent species delimitation unveil cryptic diversity in a Cerrado endemic lizard (Squamata: Tropidurus).

    abstract：:The recognition of cryptic diversity within geographically widespread species is gradually becoming a trend in the highly speciose Neotropical biomes. The statistical methods to recognise such cryptic lineages are rapidly advancing, but have rarely been applied to genomic-scale datasets. Herein, we used phylogenomic d...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.12.009

    authors： Domingos FMCB,Colli GR,Lemmon A,Lemmon EM,Beheregaray LB

    更新日期：2017-02-01 00:00:00

  • Evolutionary lineages of marine snails identified using molecular phylogenetics and geometric morphometric analysis of shells.

    abstract：:The relationship between morphology and inheritance is of perennial interest in evolutionary biology and palaeontology. Using three marine snail genera Penion, Antarctoneptunea and Kelletia, we investigate whether systematics based on shell morphology accurately reflect evolutionary lineages indicated by molecular phy...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2018.06.009

    authors： Vaux F,Trewick SA,Crampton JS,Marshall BA,Beu AG,Hills SFK,Morgan-Richards M

    更新日期：2018-10-01 00:00:00

  • Phylogenetic relationship of silkmoths inferred from sequence data of the arylphorin gene.

    abstract：:A portion of the arylphorin gene from 11 silkmoth species belonging to the families Saturniidae and Bombycidae was amplified by a polymerase chain reaction. Approximately 460 bp corresponding to the third exon, the third intron, and the fourth exon were successfully amplified, sequenced, and compared. Sequences corres...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.1995.1021

    authors： Shimada T,Kurimoto Y,Kobayashi M

    更新日期：1995-09-01 00:00:00

  • Systematics of snow voles (Chionomys, Arvicolinae) revisited.

    abstract：:To elucidate the evolutionary history of snow voles, genus Chionomys, we studied the phylogeography of Chionomysnivalis across its range and investigated its relationships with two congeneric species, Chionomysgud and Chionomysroberti, using independent molecular markers. Analyses were based on mitochondrial (~940 bp ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2011.12.004

    authors： Yannic G,Burri R,Malikov VG,Vogel P

    更新日期：2012-03-01 00:00:00

  • Molecular and morphological data reveal non-monophyly and speciation in imperiled freshwater mussels (Anodontoides and Strophitus).

    abstract：:Accurate taxonomic placement is vital to conservation efforts considering many intrinsic biological characteristics of understudied species are inferred from closely related taxa. The rayed creekshell, Anodontoides radiatus (Conrad, 1834), exists in the Gulf of Mexico drainages from western Florida to Louisiana and ha...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2017.10.018

    authors： Smith CH,Johnson NA,Pfeiffer JM,Gangloff MM

    更新日期：2018-02-01 00:00:00

  • Evidence for two independent lineages of shiitake of the americas (Lentinula boryana) based on rDNA and beta-tubulin gene sequences.

    abstract：:Portions of ribosomal RNA genes (rDNA) were sequenced from members of the genus Lentinula and were used, along with partial beta-tubulin gene sequences, for phylogenetic reconstructions. The rDNA sequences of L. boryana were separated into two well-defined lineages. Lineage 1 was composed of isolates from Mexico and C...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.1999.0677

    authors： Thon MR,Royse DJ

    更新日期：1999-12-01 00:00:00

  • Repeated range expansions and inter-/postglacial recolonization routes of Sargentodoxa cuneata (Oliv.) Rehd. et Wils. (Lardizabalaceae) in subtropical China revealed by chloroplast phylogeography.

    abstract：:Most plant phylogeographic studies in subtropical China have stressed the importance of multiple refugia and limited admixture among refugia. Little attention has been paid to range expansion and recolonization routes in this region. In this study, we implemented a phylogeographic survey on Sargentodoxa cuneata, a wid...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.02.016

    authors： Tian S,Lei SQ,Hu W,Deng LL,Li B,Meng QL,Soltis DE,Soltis PS,Fan DM,Zhang ZY

    更新日期：2015-04-01 00:00:00

  • Molecular phylogenetics of New World searobins (Triglidae; Prionotinae).

    abstract：:Phylogenetic relationships among members of the New World searobin genera Bellator and Prionotus (Family Triglidae, Subfamily Prionotinae) and among other searobins in the families Triglidae and Peristediidae were investigated using both mitochondrial and nuclear DNA sequences. Phylogenetic hypotheses derived from max...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.11.017

    authors： Portnoy DS,Willis SC,Hunt E,Swift DG,Gold JR,Conway KW

    更新日期：2017-02-01 00:00:00

  • Genome-scale transfer of mitochondrial DNA from legume hosts to the holoparasite Lophophytum mirabile (Balanophoraceae).

    abstract：:Angiosperm mitochondrial horizontal gene transfer (HGT) has been widely reported during the past decades. With a few exceptions, foreign sequences are mitochondrial genes or intronic regions from other plants, indicating that HGT has played a major role in shaping mitochondrial genome evolution. Host-parasite relation...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2018.12.006

    authors： Sanchez-Puerta MV,Edera A,Gandini CL,Williams AV,Howell KA,Nevill PG,Small I

    更新日期：2019-03-01 00:00:00

  • The effect of heterotachy in multigene analysis using the neighbor joining method.

    abstract：:Sequence alignments of multiple genes are routinely used to infer phylogenetic relationships among species. The analysis of their concatenation is more likely to give correct results under an assumption of homotachy (i.e., the evolutionary rates within lineages in each of the concatenated genes are constant during evo...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.05.025

    authors： Som A,Fuellen G

    更新日期：2009-09-01 00:00:00

  • Nocturnal claroteine catfishes reveal dual colonisation but a single radiation in Lake Tanganyika.

    abstract：:Lake Tanganyika (LT) is a biodiversity hotspot supporting many endemic radiations that provide comparative systems in which to investigate if there are common factors leading to the build-up of its considerable diversity. Despite LT containing the highest diversity of lacustrine catfishes on Earth, the evolutionary re...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.01.013

    authors： Peart CR,Bills R,Wilkinson M,Day JJ

    更新日期：2014-04-01 00:00:00

  • Can the current molecular arsenal adequately track rapid divergence events within Simuliidae (Diptera)?

    abstract：:Ancient rapid divergence events, such as those that took place during the Mesozoic, are pervasive in evolution and represent a major challenge to phylogenetic biologists. The number of molecular phylogenetic studies in which rapid divergence has been invoked to account for poor phylogenetic resolution has steadily inc...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/s1055-7903(02)00397-4

    authors： Moulton JK

    更新日期：2003-04-01 00:00:00

  • Diversity, abundance, and evolutionary dynamics of Pong-like transposable elements in Triticeae.

    abstract：:Pong-like elements are members of the PIF/Harbinger superfamily of DNA transposons that has been described in many plants, animals, and fungi. Most Pong elements contain two open reading frames (ORFs). One encodes a transposase (ORF2) that catalyzes transposition of Pong and related non-autonomous elements, while the ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.07.008

    authors： Markova DN,Mason-Gamer RJ

    更新日期：2015-12-01 00:00:00

  • Molecular markers reveal genetic isolation and phylogeography of the S and F intersterility groups of the wood-decay fungus Heterobasidion annosum.

    abstract：:The root-rot fungus Heterobasidion annosum (Fr.) Bref. species complex consists of three intersterility groups (S, F, and P), separated by their host affinity. The phylogenetic relationship of the species complex was studied, with the focus on the S and F groups, by comparing DNA sequences of four nuclear gene fragmen...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/s1055-7903(03)00087-3

    authors： Johannesson H,Stenlid J

    更新日期：2003-10-01 00:00:00

  • Phylogenetic relationships in Nicotiana (Solanaceae) inferred from multiple plastid DNA regions.

    abstract：:For Nicotiana, with 75 naturally occurring species (40 diploids and 35 allopolyploids), we produced 4656bp of plastid DNA sequence for 87 accessions and various outgroups. The loci sequenced were trnL intron and trnL-F spacer, trnS-G spacer and two genes, ndhF and matK. Parsimony and Bayesian analyses yielded identica...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2004.05.002

    authors： Clarkson JJ,Knapp S,Garcia VF,Olmstead RG,Leitch AR,Chase MW

    更新日期：2004-10-01 00:00:00

  • Seven-locus molecular phylogeny of Myctophiformes (Teleostei; Scopelomorpha) highlights the utility of the order for studies of deep-sea evolution.

    abstract：:Fishes of the order Myctophiformes (Teleostei; Scopelomorpha) comprise over half of all deep-sea biomass, and are a critical component of marine ecosystems worldwide. Members of the family Myctophidae, within Myctophiformes, form the majority of species diversity within the order (∼250 species, 33 genera, 2 subfamilie...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.02.009

    authors： Denton JS

    更新日期：2014-07-01 00:00:00

  • Multilocus approaches reveal underestimated species diversity and inter-specific gene flow in pikas (Ochotona) from southwestern China.

    abstract：:The phylogeny of living pikas (Ochotonidae, Ochotona) remains obscure, and pika species diversity in southwestern China has never been well explored. In this study, 96 tissue samples from 11 valid species in three classified subgenera (Pika, Ochotona and Conothoa) from 23 locations were characterized using multilocus ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.11.005

    authors： Koju NP,He K,Chalise MK,Ray C,Chen Z,Zhang B,Wan T,Chen S,Jiang X

    更新日期：2017-02-01 00:00:00

  • Phylogeographic patterns in widespread corvid birds.

    abstract：:Intraspecific genetic diversity and phylogeography of Corvus corone was investigated using the mitochondrial (mt) control region as a molecular marker. A split into two distinct mt lineages was observed. One represents individuals from a wide geographic range spanning from England to the Russian Far East (Kamchatka), ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.06.016

    authors： Haring E,Gamauf A,Kryukov A

    更新日期：2007-12-01 00:00:00

  • Large expansion segments in 18S rDNA support a new sponge clade (Class Demospongiae, Order Haplosclerida).

    abstract：:Newly emerging molecular phylogenetic hypotheses involving the sponge Order Haplosclerida (Class Demospongiae) are far removed from traditional views on their classification using morphology. In the new grouping of marine haplosclerid taxa by molecular data all members of one highly supported clade were found to have ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2008.02.018

    authors： Redmond NE,McCormack GP

    更新日期：2008-06-01 00:00:00

  • Cleaners among wrasses: Phylogenetics and evolutionary patterns of cleaning behavior within Labridae.

    abstract：:Cleaner fishes remove and consume ectoparasites and are often categorized by whether they perform this behavior: (1) predominately as juveniles, (2) facultatively throughout ontogeny, or (3) obligately. Through a literature search, we confirmed that with at least 58 species exhibiting cleaning behavior, the Labridae (...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.09.006

    authors： Baliga VB,Law CJ

    更新日期：2016-01-01 00:00:00

  • Molecular phylogeny of Vipera Laurenti, 1768 and the related genera Macrovipera (Reuss, 1927) and Daboia (Gray, 1842), with comments about neurotoxic Vipera aspis aspis populations.

    abstract：:We used mtDNA sequences (cytochrome b and NADH dehydrogenase subunit 2) to reconstruct molecular phylogenies of Vipera sensu lato, Vipera sensu stricto, and Vipera aspis. Three major clades were identified within the Vipera s.l. group: (1) the European vipers, (2) the oriental vipers, consisting of Montivipera (Vipera...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2004.11.004

    authors： Garrigues T,Dauga C,Ferquel E,Choumet V,Failloux AB

    更新日期：2005-04-01 00:00:00