Overexpression of mtDNA-associated AtWhy2 compromises mitochondrial function.

Abstract:

BACKGROUND:StWhy1, a member of the plant-specific Whirly single-stranded DNA-binding protein family, was first characterized as a transcription factor involved in the activation of the nuclear PR-10a gene following defense-related stress in potato. In Arabidopsis thaliana, Whirlies have recently been shown to be primarily localized in organelles. Two representatives of the family, AtWhy1 and AtWhy3 are imported into plastids while AtWhy2 localizes to mitochondria. Their function in organelles is currently unknown. RESULTS:To understand the role of mitochondrial Whirlies in higher plants, we produced A. thaliana lines with altered expression of the atwhy2 gene. Organellar DNA immunoprecipitation experiments demonstrated that AtWhy2 binds to mitochondrial DNA. Overexpression of atwhy2 in plants perturbs mitochondrial function by causing a diminution in transcript levels and mtDNA content which translates into a low activity level of respiratory chain complexes containing mtDNA-encoded subunits. This lowered activity of mitochondria yielded plants that were reduced in size and had distorted leaves that exhibited accelerated senescence. Overexpression of atwhy2 also led to early accumulation of senescence marker transcripts in mature leaves. Inactivation of the atwhy2 gene did not affect plant development and had no detectable effect on mitochondrial morphology, activity of respiratory chain complexes, transcription or the amount of mtDNA present. This lack of phenotype upon abrogation of atwhy2 expression suggests the presence of functional homologues of the Whirlies or the activation of compensating mechanisms in mitochondria. CONCLUSION:AtWhy2 is associated with mtDNA and its overexpression results in the production of dysfunctional mitochondria. This report constitutes the first evidence of a function for the Whirlies in organelles. We propose that they could play a role in the regulation of the gene expression machinery of organelles.

journal_name

BMC Plant Biol

journal_title

BMC plant biology

authors

Maréchal A,Parent JS,Sabar M,Véronneau-Lafortune F,Abou-Rached C,Brisson N

doi

10.1186/1471-2229-8-42

subject

Has Abstract

pub_date

2008-04-18 00:00:00

pages

42

issn

1471-2229

pii

1471-2229-8-42

journal_volume

8

pub_type

杂志文章
  • Changes in the Arabidopsis RNA-binding proteome reveal novel stress response mechanisms.

    abstract:BACKGROUND:RNA-binding proteins (RBPs) are increasingly recognized as regulatory component of post-transcriptional gene expression. RBPs interact with mRNAs via RNA-binding domains and these interactions affect RNA availability for translation, RNA stability and turn-over thus affecting both RNA and protein expression ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-019-1750-x

    authors: Marondedze C,Thomas L,Gehring C,Lilley KS

    更新日期:2019-04-11 00:00:00

  • Small chloroplast-targeted DnaJ proteins are involved in optimization of photosynthetic reactions in Arabidopsis thaliana.

    abstract:BACKGROUND:DnaJ proteins participate in many metabolic pathways through dynamic interactions with various components of these processes. The role of three small chloroplast-targeted DnaJ proteins, AtJ8 (At1 g80920), AtJ11 (At4 g36040) and AtJ20 (At4 g13830), was investigated here using knock-out mutants of Arabidopsis ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-10-43

    authors: Chen KM,Holmström M,Raksajit W,Suorsa M,Piippo M,Aro EM

    更新日期:2010-03-07 00:00:00

  • Transcriptomic and proteomic approach to identify differentially expressed genes and proteins in Arabidopsis thaliana mutants lacking chloroplastic 1 and cytosolic FBPases reveals several levels of metabolic regulation.

    abstract:BACKGROUND:During the photosynthesis, two isoforms of the fructose-1,6-bisphosphatase (FBPase), the chloroplastidial (cFBP1) and the cytosolic (cyFBP), catalyse the first irreversible step during the conversion of triose phosphates (TP) to starch or sucrose, respectively. Deficiency in cyFBP and cFBP1 isoforms provokes...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-016-0945-7

    authors: Soto-Suárez M,Serrato AJ,Rojas-González JA,Bautista R,Sahrawy M

    更新日期:2016-12-01 00:00:00

  • Early markers are present in both embryogenesis pathways from microspores and immature zygotic embryos in cork oak, Quercus suber L.

    abstract:BACKGROUND:In Quercus suber, cork oak, a Mediterranean forest tree of economic and social interest, rapid production of isogenic lines and clonal propagation of elite genotypes have been achieved by developing in vitro embryogenesis from microspores and zygotic embryos respectively. Despite its high potential in tree b...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-014-0224-4

    authors: Rodríguez-Sanz H,Manzanera JA,Solís MT,Gómez-Garay A,Pintos B,Risueño MC,Testillano PS

    更新日期:2014-08-21 00:00:00

  • An improved and efficient method of Agrobacterium syringe infiltration for transient transformation and its application in the elucidation of gene function in poplar.

    abstract:BACKGROUND:Forest trees have important economic and ecological value. As a model tree, poplar has played a significant role in elucidating the molecular mechanisms underlying tree biology. However, a lack of mutant libraries and time-consuming stable genetic transformation processes severely limit progress into the fun...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-021-02833-w

    authors: Zheng L,Yang J,Chen Y,Ding L,Wei J,Wang H

    更新日期:2021-01-21 00:00:00

  • Quantitative evaluation of protocorm growth and fungal colonization in Bletilla striata (Orchidaceae) reveals less-productive symbiosis with a non-native symbiotic fungus.

    abstract:BACKGROUND:In nature, orchid plants depend completely on symbiotic fungi for their nutrition at the germination and the subsequent seedling (protocorm) stages. However, only limited quantitative methods for evaluating the orchid-fungus interactions at the protocorm stage are currently available, which greatly constrain...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-017-1002-x

    authors: Yamamoto T,Miura C,Fuji M,Nagata S,Otani Y,Yagame T,Yamato M,Kaminaka H

    更新日期:2017-02-21 00:00:00

  • WheatCRISPR: a web-based guide RNA design tool for CRISPR/Cas9-mediated genome editing in wheat.

    abstract:BACKGROUND:CRISPR/Cas9 gene editing has become a revolutionary technique for crop improvement as it can facilitate fast and efficient genetic changes without the retention of transgene components in the final plant line. Lack of robust bioinformatics tools to facilitate the design of highly specific functional guide RN...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-019-2097-z

    authors: Cram D,Kulkarni M,Buchwaldt M,Rajagopalan N,Bhowmik P,Rozwadowski K,Parkin IAP,Sharpe AG,Kagale S

    更新日期:2019-11-06 00:00:00

  • A generalized deceptive pollination system of Doritis pulcherrima (Aeridinae: Orchidaceae) with non-reconfigured pollinaria.

    abstract:BACKGROUND:As one of largest angiosperm families, orchids have long fascinated evolutionary biologists with their staggering diversity in floral design and display to promote outcrossing. Two of the most intriguing aspects of orchid pollination that promote cross-pollination are pollinarium reconfiguration (PR) and dec...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-12-67

    authors: Xiaohua J,Dezhu L,Zongxin R,Xiaoguo X

    更新日期:2012-07-03 00:00:00

  • Increase in coleoptile length and establishment by Lcol-A1, a genetic locus with major effect in wheat.

    abstract:BACKGROUND:Good establishment is important for rapid leaf area development in wheat crops. Poor establishment results in fewer, later-emerging plants, reduced leaf area and tiller number. In addition, poorly established crops suffer from increased soil moisture loss through evaporation and greater competition from weed...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-019-1919-3

    authors: Bovill WD,Hyles J,Zwart AB,Ford BA,Perera G,Phongkham T,Brooks BJ,Rebetzke GJ,Hayden MJ,Hunt JR,Spielmeyer W

    更新日期:2019-07-29 00:00:00

  • ABC1K10a, an atypical kinase, functions in plant salt stress tolerance.

    abstract:BACKGROUND:ABC1K (Activity of BC1 complex Kinase) is an evolutionarily primitive atypical kinase family widely distributed among prokaryotes and eukaryotes. The ABC1K protein kinases in Arabidopsis are predicted to localize either to the mitochondria or chloroplasts, in which plastid-located ABC1K proteins are involved...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-020-02467-4

    authors: Qin X,Duan Z,Zheng Y,Liu WC,Guo S,Botella JR,Song CP

    更新日期:2020-06-10 00:00:00

  • Comparative metabolomic analysis reveals the variations in taxoids and flavonoids among three Taxus species.

    abstract:BACKGROUND:Trees of the genus Taxus are highly valuable medicinal plants with multiple pharmacological effects on various cancer treatments. Paclitaxel from Taxus trees is an efficient and widely used anticancer drug, however, the accumulation of taxoids and other active ingredients can vary greatly among Taxus species...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-019-2146-7

    authors: Zhou T,Luo X,Zhang C,Xu X,Yu C,Jiang Z,Zhang L,Yuan H,Zheng B,Pi E,Shen C

    更新日期:2019-11-29 00:00:00

  • A novel system for evaluating drought-cold tolerance of grapevines using chlorophyll fluorescence.

    abstract:BACKGROUND:Grape production in continental climatic regions suffers from the combination of drought and cold stresses during winter. Developing a reliable system to simulate combined drought-cold stress and to determine physiological responses and regulatory mechanisms is important. Evaluating tolerance to combined str...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-015-0459-8

    authors: Su L,Dai Z,Li S,Xin H

    更新日期:2015-03-11 00:00:00

  • Constraints to virus infection in Nicotiana benthamiana plants transformed with a potyvirus amplicon.

    abstract:BACKGROUND:Plant genomes have been transformed with full-length cDNA copies of viral genomes, giving rise to what has been called 'amplicon' systems, trying to combine the genetic stability of transgenic plants with the elevated replication rate of plant viruses. However, amplicons' performance has been very variable r...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-10-139

    authors: Calvo M,Dujovny G,Lucini C,Ortuño J,Alamillo JM,Simón-Mateo C,López-Moya JJ,García JA

    更新日期:2010-07-06 00:00:00

  • Annotation of gene function in citrus using gene expression information and co-expression networks.

    abstract:BACKGROUND:The genus Citrus encompasses major cultivated plants such as sweet orange, mandarin, lemon and grapefruit, among the world's most economically important fruit crops. With increasing volumes of transcriptomics data available for these species, Gene Co-expression Network (GCN) analysis is a viable option for p...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-14-186

    authors: Wong DC,Sweetman C,Ford CM

    更新日期:2014-07-15 00:00:00

  • Intraspecific variation of residual heterozygosity and its utility for quantitative genetic studies in maize.

    abstract:BACKGROUND:Residual heterozygosity (RH) in advanced inbred lines of plants benefits quantitative trait locus (QTL) mapping studies. However, knowledge of factors affecting the genome-wide distribution of RH remains limited. RESULTS:A set of 2196 heterogeneous inbred family (HIF) maize lines derived from 12 recombinant...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-018-1287-4

    authors: Liu N,Liu J,Li W,Pan Q,Liu J,Yang X,Yan J,Xiao Y

    更新日期:2018-04-19 00:00:00

  • Adaptive strategy of allohexaploid wheat to long-term salinity stress.

    abstract:BACKGROUND:Most studies of crop salinity tolerance are conducted under short-term stress condition within one growth stage. Understanding of the mechanisms of crop response to long-term salinity stress (LSS) is valuable for achieving the improvement of crop salinity tolerance. In the current study, we exposed allohexap...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-020-02423-2

    authors: Bhanbhro N,Xiao B,Han L,Lu H,Wang H,Yang C

    更新日期:2020-05-12 00:00:00

  • Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size.

    abstract:BACKGROUND:A positive relationship between genome size and intron length is observed across eukaryotes including Angiosperms plants, indicating a co-evolution of genome size and gene structure. Conifers have very large genomes and longer introns on average than most plants, but impacts of their large genome and longer ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-14-95

    authors: Stival Sena J,Giguère I,Boyle B,Rigault P,Birol I,Zuccolo A,Ritland K,Ritland C,Bohlmann J,Jones S,Bousquet J,Mackay J

    更新日期:2014-04-16 00:00:00

  • Genome-wide analysis of the grapevine stilbene synthase multigenic family: genomic organization and expression profiles upon biotic and abiotic stresses.

    abstract:BACKGROUND:Plant stilbenes are a small group of phenylpropanoids, which have been detected in at least 72 unrelated plant species and accumulate in response to biotic and abiotic stresses such as infection, wounding, UV-C exposure and treatment with chemicals. Stilbenes are formed via the phenylalanine/polymalonate-rou...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-12-130

    authors: Vannozzi A,Dry IB,Fasoli M,Zenoni S,Lucchin M

    更新日期:2012-08-03 00:00:00

  • RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways.

    abstract:BACKGROUND:In cereal crops such as wheat, an optimal timing of developmental transitions is required to maximize grain yield. Many of these developmental changes are precisely regulated by changes in the duration, intensity or quality of light. Phytochromes are dimeric photoreceptors that absorb light maximally in the ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-016-0831-3

    authors: Pearce S,Kippes N,Chen A,Debernardi JM,Dubcovsky J

    更新日期:2016-06-21 00:00:00

  • EDR2 negatively regulates salicylic acid-based defenses and cell death during powdery mildew infections of Arabidopsis thaliana.

    abstract:BACKGROUND:The hypersensitive necrosis response (HR) of resistant plants to avirulent pathogens is a form of programmed cell death in which the plant sacrifices a few cells under attack, restricting pathogen growth into adjacent healthy tissues. In spite of the importance of this defense response, relatively little is ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-7-35

    authors: Vorwerk S,Schiff C,Santamaria M,Koh S,Nishimura M,Vogel J,Somerville C,Somerville S

    更新日期:2007-07-06 00:00:00

  • Identification of potential target genes for the tomato fruit-ripening regulator RIN by chromatin immunoprecipitation.

    abstract:BACKGROUND:During ripening, climacteric fruits increase their ethylene level and subsequently undergo various physiological changes, such as softening, pigmentation and development of aroma and flavor. These changes occur simultaneously and are caused by the highly synchronized expression of numerous genes at the onset...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-11-26

    authors: Fujisawa M,Nakano T,Ito Y

    更新日期:2011-01-30 00:00:00

  • Synthesis of chlorophyll b: localization of chlorophyllide a oxygenase and discovery of a stable radical in the catalytic subunit.

    abstract:BACKGROUND:Assembly of stable light-harvesting complexes (LHCs) in the chloroplast of green algae and plants requires synthesis of chlorophyll (Chl) b, a reaction that involves oxygenation of the 7-methyl group of Chl a to a formyl group. This reaction uses molecular oxygen and is catalyzed by chlorophyllide a oxygenas...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-4-5

    authors: Eggink LL,LoBrutto R,Brune DC,Brusslan J,Yamasato A,Tanaka A,Hoober JK

    更新日期:2004-04-15 00:00:00

  • Symbiosis dependent accumulation of primary metabolites in arbuscule-containing cells.

    abstract:BACKGROUND:The arbuscular mycorrhizal symbiosis is characterized by the presence of different symbiotic structures and stages within a root system. Therefore tools allowing the analysis of molecular changes at a cellular level are required to reveal insight into arbuscular mycorrhizal (AM) symbiosis development and fun...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-015-0601-7

    authors: Gaude N,Bortfeld S,Erban A,Kopka J,Krajinski F

    更新日期:2015-09-30 00:00:00

  • Characterisation of microRNAs from apple (Malus domestica 'Royal Gala') vascular tissue and phloem sap.

    abstract:BACKGROUND:Plant microRNAs (miRNAs) are a class of small, non-coding RNAs that play an important role in development and environmental responses. Hundreds of plant miRNAs have been identified to date, mainly from the model species for which there are available genome sequences. The current challenge is to characterise ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-10-159

    authors: Varkonyi-Gasic E,Gould N,Sandanayaka M,Sutherland P,MacDiarmid RM

    更新日期:2010-08-04 00:00:00

  • An APETALA1 ortholog affects plant architecture and seed yield component in oilseed rape (Brassica napus L.).

    abstract:BACKGROUND:Increasing the productivity of rapeseed as one of the widely cultivated oil crops in the world is of upmost importance. As flowering time and plant architecture play a key role in the regulation of rapeseed yield, understanding the genetic mechanism underlying these traits can boost the rapeseed breeding. Me...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-018-1606-9

    authors: Shah S,Karunarathna NL,Jung C,Emrani N

    更新日期:2018-12-29 00:00:00

  • Seedling development traits in Brassica napus examined by gene expression analysis and association mapping.

    abstract:BACKGROUND:An optimal seedling development of Brassica napus plants leads to a higher yield stability even under suboptimal growing conditions and has therefore a high importance for plant breeders. The objectives of our study were to (i) examine the expression levels of candidate genes in seedling leaves of B. napus a...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-015-0496-3

    authors: Körber N,Bus A,Li J,Higgins J,Bancroft I,Higgins EE,Parkin IA,Salazar-Colqui B,Snowdon RJ,Stich B

    更新日期:2015-06-09 00:00:00

  • Transcript and metabolite analysis in Trincadeira cultivar reveals novel information regarding the dynamics of grape ripening.

    abstract:BACKGROUND:Grapes (Vitis vinifera L.) are economically the most important fruit crop worldwide. However, the complexity of molecular and biochemical events that lead to the onset of ripening of nonclimacteric fruits is not fully understood which is further complicated in grapes due to seasonal and cultivar specific var...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-11-149

    authors: Fortes AM,Agudelo-Romero P,Silva MS,Ali K,Sousa L,Maltese F,Choi YH,Grimplet J,Martinez-Zapater JM,Verpoorte R,Pais MS

    更新日期:2011-11-02 00:00:00

  • Salinity tolerance, Na+ exclusion and allele mining of HKT1;5 in Oryza sativa and O. glaberrima: many sources, many genes, one mechanism?

    abstract:BACKGROUND:Cultivated rice species (Oryza sativa L. and O. glaberrima Steud.) are generally considered among the crop species most sensitive to salt stress. A handful of lines are known to be tolerant, and a small number of these have been used extensively as donors in breeding programs. However, these donors use many ...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-13-32

    authors: Platten JD,Egdane JA,Ismail AM

    更新日期:2013-02-27 00:00:00

  • Transcriptomic analysis links gene expression to unilateral pollen-pistil reproductive barriers.

    abstract:BACKGROUND:Unilateral incompatibility (UI) is an asymmetric reproductive barrier that unidirectionally prevents gene flow between species and/or populations. UI is characterized by a compatible interaction between partners in one direction, but in the reciprocal cross fertilization fails, generally due to pollen tube r...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/s12870-017-1032-4

    authors: Broz AK,Guerrero RF,Randle AM,Baek YS,Hahn MW,Bedinger PA

    更新日期:2017-04-24 00:00:00

  • A candidate gene based approach validates Md-PG1 as the main responsible for a QTL impacting fruit texture in apple (Malus x domestica Borkh).

    abstract:BACKGROUND:Apple is a widely cultivated fruit crop for its quality properties and extended storability. Among the several quality factors, texture is the most important and appreciated, and within the apple variety panorama the cortex texture shows a broad range of variability. Anatomically these variations depend on d...

    journal_title:BMC plant biology

    pub_type: 杂志文章

    doi:10.1186/1471-2229-13-37

    authors: Longhi S,Hamblin MT,Trainotti L,Peace CP,Velasco R,Costa F

    更新日期:2013-03-04 00:00:00