Desulfoglaeba alkanexedens gen. nov., sp. nov., an n-alkane-degrading, sulfate-reducing bacterium.

Abstract:

:Two novel sulfate-reducing bacteria, strains ALDC(T) and Lake, which were able to oxidize n-alkanes, were isolated from a naval oily wastewater-storage facility (VA, USA) and from oilfield production water (OK, USA), respectively. The type strain (ALDC(T)) had a narrow substrate specificity and could grow only with n-alkanes (from C(6) to C(12)), pyruvate, butyrate, hexanoic acid and 4-methyloctanoic acid. Cells of strain ALDC(T) stained Gram-negative and were slightly curved, short rods with oval ends (2.5-3.0x1.0-1.4 microm), often occurring in pairs. Cells tended to form aggregates or large clusters and were non-motile and did not form endospores. Optimum growth occurred between 31 and 37 degrees C and at pH 6.5-7.2. NaCl was not required for growth, but salt concentrations up to 55 g l(-1) could be tolerated. The DNA G+C content was 53.6 mol%. Phylogenetic analysis of the 16S rRNA genes revealed that strains ALDC(T) and Lake were closely related, but not identical (99.9 % similarity). The two strains were not closely related to other known alkane-degrading, sulfate-reducing bacteria or to other genera of the Deltaproteobacteria. Therefore, it is proposed that strain ALDC(T) (=JCM 13588(T)=ATCC BAA-1302(T)) represents the type strain of a novel species and genus, with the name Desulfoglaeba alkanexedens gen. nov., sp. nov.

authors

Davidova IA,Duncan KE,Choi OK,Suflita JM

doi

10.1099/ijs.0.64398-0

subject

Has Abstract

pub_date

2006-12-01 00:00:00

pages

2737-2742

issue

Pt 12

eissn

1466-5026

issn

1466-5034

journal_volume

56

pub_type

杂志文章
  • Bacillus alkalitolerans sp. nov., isolated from marine sediment near a hydrothermal vent.

    abstract::A Gram-stain-positive, endospore-forming, rod-shaped, motile and strictly aerobic strain, designated T3-209T, was isolated from sediment sampled at a water depth of 1206 m of the southern Okinawa Trough at station T1 (25.07° N, 122.58° E) near the Tangyin hydrothermal vent during an expedition on the R/V Kexue in May ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002648

    authors: Liu Y,Yu M,Zhang XH

    更新日期:2018-04-01 00:00:00

  • Myroides xuanwuensis sp. nov., a mineral-weathering bacterium isolated from forest soil.

    abstract::A Gram-reaction-negative, aerobic, non-motile, yellow-pigmented, rod-shaped bacterium, designated strain TH-19(T), was isolated from a forest soil sample in Jiangsu province, China. On the basis of 16S rRNA gene sequence similarity, strain TH-19(T) was shown to belong to the genus Myroides, a member of the phylum Bact...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.056739-0

    authors: Zhang ZD,He LY,Huang Z,Sheng XF

    更新日期:2014-02-01 00:00:00

  • Solibius ginsengiterrae gen. nov., sp. nov., isolated from soil of a ginseng field, and emended description of the genus Sediminibacterium and of Sediminibacterium salmoneium.

    abstract::A novel Gram-staining-negative bacterial strain, designated DCY13T, was isolated from soil of a ginseng field in Korea and characterized by using a polyphasic approach. The phylogenetic analysis based on 16S rRNA gene sequences revealed that strain DCY13T forms a cluster with members of the genera Sediminibacterium, F...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章,收录出版

    doi:10.1099/ijs.0.011882-0

    authors: Kim YJ,Kim MK,Bui TP,Kim HB,Srinivasan S,Yang DC

    更新日期:2010-12-01 00:00:00

  • Pelotomaculum thermopropionicum gen. nov., sp. nov., an anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium.

    abstract::An anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium, strain SI(T), isolated previously from granular sludge in a thermophilic upflow anaerobic sludge blanket (UASB) reactor, was characterized. The strain could grow fermentatively on pyruvate and fumarate in pure culture. The strain grew on propionate...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-5-1729

    authors: Imachi H,Sekiguchi Y,Kamagata Y,Hanada S,Ohashi A,Harada H

    更新日期:2002-09-01 00:00:00

  • Pseudomonas saxonica sp. nov., isolated from raw milk and skimmed milk concentrate.

    abstract::A polyphasic approach was used to investigate the taxonomic status of two bacterial strains, WS 5072T and WS 5092, isolated from skimmed milk concentrate and raw cow's milk. The 16S rRNA and rpoD gene sequences affiliated the strains to the same, hitherto unknown, Pseudomonas species. Further examinations of the draft...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003851

    authors: Hofmann K,Huptas C,Doll EV,Scherer S,Wenning M

    更新日期:2020-02-01 00:00:00

  • Ochrobactrum pituitosum sp. nov., isolated from an industrial environment.

    abstract::Strain CCUG 50899, a Gram-negative, rod-shaped, non-spore-forming, motile bacterium isolated from industrial environment in Sweden and tentatively assigned to the species Ochrobactrum anthropi, was studied in order to clarify its taxonomic status. 16S rRNA gene sequence similarities placed the strain in the genus Ochr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.011668-0

    authors: Huber B,Scholz HC,Kämpfer P,Falsen E,Langer S,Busse HJ

    更新日期:2010-02-01 00:00:00

  • Bacillus kiskunsagensis sp. nov., a novel alkaliphilic and moderately halophilic bacterium isolated from soda soil.

    abstract::An alkaliphilic and moderately halophilic strain characterized by optimal growth at pH 9.0-10.0 and 7 % (w/v) NaCl, and designated B16-24T, was isolated from the rhizosphere soil of the bayonet grass Bolboschoenus maritimus at a soda pond in the Kiskunság National Park, Hungary. Cells of the strain were Gram-staining-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002149

    authors: Borsodi AK,Tóth E,Aszalós JM,Bárány Á,Schumann P,Spröer C,Kovács AL,Márialigeti K,Szili-Kovács T

    更新日期:2017-09-01 00:00:00

  • Formation of compound generic names based on personal names: a proposal for emendation of Appendix 9 of the International Code of Nomenclature of Prokaryotes.

    abstract::Appendix 9, the orthography appendix of the International Code of Nomenclature of Prokaryotes, provides guidelines for the correct formation of generic names and specific epithets to honour famous microbiologists and other persons connected with natural science. However, no guidelines are given for the correct formati...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003192

    authors: Oren A,Chuvochina M,Ventura S

    更新日期:2019-02-01 00:00:00

  • Mobilicoccus caccae sp. nov., isolated from the faeces of the primate Rhinopithecus roxellanae.

    abstract::A novel actinobacterium, designated YIM 101593T, was isolated from the faeces of a primate (Rhinopithecus roxellanae) living in Yunnan Wild Animal Park in Yunnan province, south-west China. The isolate was Gram-stain-positive, facultatively anaerobic, coccus-shaped, oxidase-negative and motile. The cell wall contained...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001939

    authors: Chen X,Li QY,Li GD,Xu FJ,Jiang CL,Han L,Huang XS,Jiang Y

    更新日期:2017-07-01 00:00:00

  • Bacillus iranensis sp. nov., a moderate halophile from a hypersaline lake.

    abstract::A Gram-positive, moderately halophilic rod, designated X5BT, was isolated from saline mud of the hypersaline lake Aran-Bidgol in Iran. Strain X5BT was a strictly aerobic, motile bacterium that produced ellipsoidal endospores at a central-subterminal position in non-swollen sporangia. The isolate grew at pH 7.0-10.0 (o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.030874-0

    authors: Bagheri M,Didari M,Amoozegar MA,Schumann P,Sánchez-Porro C,Mehrshad M,Ventosa A

    更新日期:2012-04-01 00:00:00

  • Morphological and molecular characterization of Orbilia pseudopolybrocha and O. tonghaiensis, two new species of Orbiliaceae from China.

    abstract::This study examined over 20 fungal specimens of the Orbiliaceae (Orbiliomycetes) from different regions in China. Our analyses based on morphological traits and the ITS rDNA sequences revealed two new Orbilia species with drechslerella-like asexual morphs. These new species are able to trap nematodes with constricting...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004088

    authors: Zhang Y,Qiao M,Baral HO,Xu J,Zhang KQ,Yu ZF

    更新日期:2020-04-01 00:00:00

  • Halomonas avicenniae sp. nov., isolated from the salty leaves of the black mangrove Avicennia germinans in Puerto Rico.

    abstract::A Gram-negative, short rod to oval-shaped bacterium (strain MW2a(T)) was isolated from the surface of leaves of the black mangrove Avicennia germinans and subjected to a polyphasic taxonomic study. Strain MW2a(T) was moderately halophilic, growing at NaCl concentrations in the range 0-25 % (w/v) with optimum growth at...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64818-0

    authors: Soto-Ramírez N,Sánchez-Porro C,Rosas S,González W,Quiñones M,Ventosa A,Montalvo-Rodríguez R

    更新日期:2007-05-01 00:00:00

  • Nonlabens halophilus sp. nov., isolated from reclaimed land.

    abstract::A Gram-stain-negative, orange-pigmented, non-spore-forming, non-motile, aerobic, rod-shaped bacterial strain, designated CAU 1131T, was isolated from reclaimed land. Strain CAU 1131T grew optimally at 30 °C and at pH 6.5 in the presence of 4 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001590

    authors: Oh M,Kim JH,Bora N,Kim W

    更新日期:2017-01-01 00:00:00

  • Bensingtonia changbaiensis sp. nov. and Bensingtonia sorbi sp. nov., novel ballistoconidium-forming yeast species from plant leaves.

    abstract::Six ballistoconidium-forming yeast strains that were isolated from plant leaves collected on Changbai Mountain, north-east China, were assigned to the genus Bensingtonia Ingold emend. Nakase & Boekhout due to the formation of asymmetrical ballistoconidia, cream-coloured colonies and Q-9 as the major ubiquinone. Two se...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02736-0

    authors: Wang QM,Bai FY,Zhao JH,Jia JH

    更新日期:2003-11-01 00:00:00

  • Streptomyces zinciresistens sp. nov., a zinc-resistant actinomycete isolated from soil from a copper and zinc mine.

    abstract::A filamentous actinomycete, designated strain CCNWNQ 0016(T), was isolated from soil from a zinc and copper mine in Shaanxi province, north-western China. A polyphasic taxonomic study was carried out to establish the status of strain CCNWNQ 0016(T). Chemical and morphological properties of the isolate were similar to ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024018-0

    authors: Lin YB,Wang XY,Li HF,Wang NN,Wang HX,Tang M,Wei GH

    更新日期:2011-03-01 00:00:00

  • Thermoanaerobacter subterraneus sp. nov., a novel thermophile isolated from oilfield water.

    abstract::A new thermophilic, anaerobic glucose-fermenting, Gram-positive, rod-shaped bacterium, designated strain SEBR 7858T, was isolated from an oilfield water sample. Under optimal conditions on a glucose-containing medium (3% NaCl, 65 degrees C and pH 7.5), the generation time was 2.5 h. No growth occurred at 35 or 80 degr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-6-2141

    authors: Fardeau ML,Magot M,Patel BK,Thomas P,Garcia JL,Ollivier B

    更新日期:2000-11-01 00:00:00

  • Parashewanella tropica sp. nov., a mesophilic bacterium isolated from a marine sponge from Chuuk lagoon, Federated States of Micronesia, and emended description of the genus Parashewanella.

    abstract::A mesophilic, straight-rod-shaped, non-flagellated bacterium, designated MEBiC05444T, was isolated from a marine sponge collected from Chuuk lagoon, Federated States of Micronesia. The strain was Gram-negative, catalase- and oxidase-positive, and facultative anaerobic. The isolate aerobically grew at 8-38 °C (optimum,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003617

    authors: Namirimu T,Park MJ,Yang SH,Zo YG,Kwon KK

    更新日期:2019-10-01 00:00:00

  • Thermoanaerobaculum aquaticum gen. nov., sp. nov., the first cultivated member of Acidobacteria subdivision 23, isolated from a hot spring.

    abstract::A novel bacterium was isolated from a freshwater hot spring, the Hale House Spring, located at Hot Springs National Park, Hot Springs, AR, USA. Cells of strain MP-01(T) stained Gram-negative, were rod-shaped, non-motile, strictly anaerobic and chemo-organotrophic and did not form spores. Growth occurred at 50-65 °C, w...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.051425-0

    authors: Losey NA,Stevenson BS,Busse HJ,Damsté JSS,Rijpstra WIC,Rudd S,Lawson PA

    更新日期:2013-11-01 00:00:00

  • Amycolatopsis dongchuanensis sp. nov., an actinobacterium isolated from soil.

    abstract::A novel actinomycete strain, designated YIM 75904(T), was isolated from a soil sample that had been collected from a dry and hot river valley in Dongchuan county, Yunnan province, south-western China. The taxonomic position of the novel strain was investigated by a polyphasic approach. In phylogenetic analyses based o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.038125-0

    authors: Nie GX,Ming H,Li S,Zhou EM,Cheng J,Tang X,Feng HG,Tang SK,Li WJ

    更新日期:2012-11-01 00:00:00

  • Nocardiopsis rhizosphaerae sp. nov., isolated from rhizosphere soil of Halocnermum strobilaceum (Pall.) Bieb.

    abstract::An alkalitolerant actinomycete strain, designated EGI 80674T, was isolated from a rhizosphere soil of Halocnermumstrobilaceum (Pall.) Bieb in Xinjiang, north-west China and subjected to a taxonomic characterization using a polyphasic approach. Strain EGI 80674T formed white aerial hyphae with long spore chains. Whole-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001483

    authors: Zhang YG,Lu XH,Ding YB,Zhou XK,Wang HF,Guo JW,Liu YH,Duan YQ,Li WJ

    更新日期:2016-12-01 00:00:00

  • Validation of publication of new names and new combinations previously effectively published outside the IJSEM.

    abstract::The purpose of this announcement is to effect the valid publication of the following new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists should send three copies of...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63263-0

    authors:

    更新日期:2004-05-01 00:00:00

  • Dyadobacter luticola sp. nov., isolated from a sewage sediment sample.

    abstract::A Gram-stain-negative, non-motile, aerobic bacterial strain, designated T17T was isolated from a sample of sewage sediment from a Busan park (Republic of Korea). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain T17T had the highest 16S rRNA gene sequence similarity to Dyadobacter soli KCTC 224...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003178

    authors: Song Z,Song Y,Yu Y,Choi L,Wang G,Li M

    更新日期:2019-02-01 00:00:00

  • Nemorella caseinilytica gen. nov., sp. nov., isolated from forest soil.

    abstract::Two novel strains, J116-2T and J116-1, were isolated from forest soil and were taxonomically characterized by a polyphasic approach. Both strains were yellow-coloured, Gram-stain-negative, strictly aerobic, non-motile and rod-shaped bacteria. The strains were non-sporulating, catalase-positive and oxidase-negative. St...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002427

    authors: Chaudhary DK,Dahal RH,Kim J

    更新日期:2018-02-01 00:00:00

  • Metallosphaera tengchongensis sp. nov., an acidothermophilic archaeon isolated from a hot spring.

    abstract::Two novel acidothermophilic archaea, strains Ric-A(T) and Ric-F, were isolated from muddy water samples of a sulfuric hot spring located in Tengchong County, Yunnan Province, PR China. The strains were aerobic and facultatively chemolithoautotrophic. Both strains could oxidize S(0) and K2S4O6 for autotrophic growth, a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.070870-0

    authors: Peng TJ,Liu LJ,Liu C,Yang ZF,Liu SJ,Jiang CY

    更新日期:2015-02-01 00:00:00

  • Dyadobacter beijingensis sp. nov., isolated from the rhizosphere of turf grasses in China.

    abstract::Strain A54(T) was isolated from rhizospheric soil of turf grasses irrigated with reclaimed water in Taoranting Park, Beijing, China. Phenotypic, chemotaxonomic and polygenetic analyses established the affiliation of the isolate to the genus Dyadobacter. Strain A54(T) possessed 97.7, 94.4 and 94.7 % 16S rRNA gene seque...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64754-0

    authors: Dong Z,Guo X,Zhang X,Qiu F,Sun L,Gong H,Zhang F

    更新日期:2007-04-01 00:00:00

  • Pectobacterium punjabense sp. nov., isolated from blackleg symptoms of potato plants in Pakistan.

    abstract::Pectobacterium isolates SS95T, SS54 and SS56 were collected from a potato field in the Chiniot district in the plains of the Punjab province, Pakistan. Sequencing of the gapA barcode revealed that these strains belong to a novel phylogenetic group separated from P.ectobacterium wasabiae and Pectobacterium parmentieri ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003029

    authors: Sarfraz S,Riaz K,Oulghazi S,Cigna J,Sahi ST,Khan SH,Faure D

    更新日期:2018-11-01 00:00:00

  • Aquimarina aggregata sp. nov., isolated from seawater.

    abstract::A novel Gram-stain-negative, agarolytic, rod-shaped, non-flagellated, strictly aerobic strain with gliding motility, designated RZW4-3-2T, was isolated from coastal seawater of the Yellow Sea in China (119.625° E 35.517° N). The organism grew optimally at 28 °C, at pH 7.0 and in the presence of 2.0-3.0 % (w/v) NaCl. T...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001209

    authors: Wang Y,Ming H,Guo W,Chen H,Zhou C

    更新日期:2016-09-01 00:00:00

  • Parvibaculum lavamentivorans gen. nov., sp. nov., a novel heterotroph that initiates catabolism of linear alkylbenzenesulfonate.

    abstract::Strain DS-1T is a small (0.8 microm in length and 0.2 microm in diameter) heterotrophic bacterium able to omega-oxygenate the commercial surfactant linear alkylbenzenesulfonate (LAS) and shorten the side chain by beta-oxidation to yield sulfophenylcarboxylates. The morphotype is widespread in cultures able to utilize ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.03020-0

    authors: Schleheck D,Tindall BJ,Rosselló-Mora R,Cook AM

    更新日期:2004-09-01 00:00:00

  • Arenibacter catalasegens sp. nov., isolated from marine surface sediment, and emended description of the genus Arenibacter.

    abstract::A Gram-staining-negative, aerobic, non-motile, rod-shaped bacterium, designated as P308H10T, was isolated from surface sediment of the Southern Indian Ocean. Growth occurred at 4-36 °C (optimum 20-25 °C), pH 6.0-8.5 (optimum 7.5-8.0) and in the presence of 1-8 % (w/v) NaCl (optimum 2-3 %). Phylogenetic analysis based ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002576

    authors: Li AZ,Lin LZ,Zhang MX,Lv Y,Zhu HH

    更新日期:2018-03-01 00:00:00

  • Ramlibacter alkalitolerans sp. nov., alkali-tolerant bacterium isolated from soil of ginseng.

    abstract::A novel bacterial strain, designated CJ661T, was isolated from soil of ginseng in Anseong, South Korea. Cells of strain CJ661T were white-coloured, Gram-staining-negative, non-motile, aerobic and rod-shaped. Strain CJ661T grew optimally at 30 °C and pH 7.0. The analysis of 16S rRNA gene sequence of strain CJ661T showe...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002342

    authors: Lee DH,Cha CJ

    更新日期:2017-11-01 00:00:00