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Gene teams: a new formalization of gene clusters for comparative genomics.

Abstract：

:This paper describes an efficient algorithm based on a new concept called gene team for detecting conserved gene clusters among an arbitrary number of chromosomes. Within the clusters, neither the order of the genes nor their orientation need be conserved. In addition, insertion of foreign genes within the clusters are permitted to a user-defined extent. This algorithm has been implemented in a publicly available TEAM software that proves to be an efficient tool for systematic searches of conserved gene clusters. Examples of actual biological results are provided. The software is downloadable from http://www-igm.univ-mlv.fr/ approximately raffinot/geneteam.html.

journal_name

Comput Biol Chem

journal_title

Computational biology and chemistry

authors

Luc N,Risler JL,Bergeron A,Raffinot M

doi

10.1016/s1476-9271(02)00097-x

keywords:

subject

Has Abstract

pub_date

2003-02-01 00:00:00

pages

59-67

issue

1

eissn

1476-9271

issn

1476-928X

pii

S147692710200097X

journal_volume

27

pub_type

杂志文章

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