Bioinformatics in bacterial molecular epidemiology and public health: databases, tools and the next-generation sequencing revolution.

abstract：:BackgroundIn 2005 in England, universal Bacillus Calmette-Guérin (BCG) vaccination of school-age children was replaced by targeted BCG vaccination of high-risk neonates.AimEstimate the impact of the 2005 change in BCG policy on tuberculosis (TB) incidence rates in England.MethodsWe conducted an observational study by ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Abbott S,Christensen H,Welton NJ,Brooks-Pollock E

更新日期：2019-12-01 00:00:00

abstract：:Two surveys have been conducted on behalf of the Campylobacter Working Group with the aim of assessing the feasibility of a European network on human Campylobacter infections. The first survey, conducted in 18 countries, collected information about diagnostic methods used for surveillance purpose while the second one,...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Takkinen J,Ammon A,Robstad O,Breuer T,Campylobacter Working Group.

更新日期：2003-11-01 00:00:00

abstract：:A woman with controlled HIV infection developed in late August 2016 a pruritic rash with fever and conjunctival hyperaemia after a trip to the French Caribbean islands. On day 3 after symptom onset, Zika virus RNA was detected in plasma, urine and vaginal samples with respective viral loads of 3.8, 6.1 and 5.3 log cop...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Penot P,Brichler S,Guilleminot J,Lascoux-Combe C,Taulera O,Gordien E,Leparc-Goffart I,Molina JM

更新日期：2017-01-19 00:00:00

abstract：:BackgroundCampylobacter is the main cause of bacterial gastroenteritis worldwide. The main transmission route is through consumption of food contaminated with Campylobacter species or contact with infected animals. In Latvia, the prevalence of campylobacteriosis is reported to be low (4.6 cases per 100,000 population ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Meistere I,Ķibilds J,Eglīte L,Alksne L,Avsejenko J,Cibrovska A,Makarova S,Streikiša M,Grantiņa-Ieviņa L,Bērziņš A

更新日期：2019-08-01 00:00:00

abstract：:BackgroundIn most countries, including France, data on clinical indications for outpatient antibiotic prescriptions are not available, making it impossible to assess appropriateness of antibiotic use at prescription level.AimOur objectives were to: (i) propose proxy indicators (PIs) to estimate appropriateness of anti...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Thilly N,Pereira O,Schouten J,Hulscher ME,Pulcini C

更新日期：2020-07-01 00:00:00

abstract：:As antibiotic consumption rates between hospitals can vary depending on the characteristics of the patients treated, risk-adjustment that compensates for the patient-based variation is required to assess the impact of any stewardship measures. The aim of this study was to investigate the usefulness of patient-based ad...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Oza A,Donohue F,Johnson H,Cunney R

更新日期：2016-08-11 00:00:00

abstract：:BackgroundProtozoan enteroparasites Cryptosporidium species and Giardia duodenalis are major contributors to the burden of gastrointestinal illness in children globally, whereas the stramenopile Blastocystis species has been associated with irritable bowel syndrome and skin disorders.AimTo investigate the carriage of ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Reh L,Muadica AS,Köster PC,Balasegaram S,Verlander NQ,Chércoles ER,Carmena D

更新日期：2019-10-01 00:00:00

abstract：:In August 2004 seven cases of Escherichia coli O157 infection were identified in children on holiday in Cornwall, southwest England, all of whom had stayed at different sites in the area. Isolates from all seven cases were confirmed as E. coli serogroup O157 phage type 21/28. We carried out a case-control study among ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Ihekweazu C,Barlow M,Roberts S,Christensen H,Guttridge B,Lewis DA,Painter S

更新日期：2006-04-01 00:00:00

abstract：:In Austria, Salmonella enterica subsp. enterica serovar Dublin, a bovine-adapted serovar, rarely causes infections in humans. In 2000, Austria was within the European mean with an incidence of 0.1 per million inhabitants. Our data show that the vast majority of all serovar Dublin infections (human and non-human) can b...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Allerberger F,Liesegang A,Grif K,Prager R,Danzl J,Höck F,Ottl J,Dierich MP,Berghold C,Neckstaller I,Tschäpe H,Fisher I

更新日期：2002-04-01 00:00:00

abstract：:Data on newly diagnosed HIV infections and HIV prevalence in 2005 to 2010 suggest falling infection rates in injecting drug users (IDUs) in the European Union (EU). However, recent increases in HIV and hepatitis C virus (HCV) infection rates in IDUs suggest increasing injecting risks in some countries. The coverage of...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Wiessing L,Likatavicius G,Hedrich D,Guarita B,van de Laar MJ,Vicente J

更新日期：2011-12-01 00:00:00

abstract：:The rapid identification of the potentially toxigenic Corynebacterium species, C. diphtheriae, C. ulcerans and C. pseudotuberculosis is essential for diagnosis and treatment of diphtheria and diphtheria-like diseases. We used matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDIT-OF MS) i...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Konrad R,Berger A,Huber I,Boschert V,Hörmansdorfer S,Busch U,Hogardt M,Schubert S,Sing A

更新日期：2010-10-28 00:00:00

abstract：:Colistin resistance was investigated in 1,696 isolates collected from 2007 to 2014 within the frame of the French livestock antimicrobial resistance surveillance programme. The mcr-1 gene was detected in all commensal Escherichia coli isolates with a minimum inhibitory concentration to colistin above the 2 mg/L cut-of...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Perrin-Guyomard A,Bruneau M,Houée P,Deleurme K,Legrandois P,Poirier C,Soumet C,Sanders P

更新日期：2016-01-01 00:00:00

abstract：:On 31 August, a veterinarian and a farmworker were hospitalised for skin lesions. Both had been exposed to a dead cow on 19 August on a farm near Rome, where eight further cattle died of confirmed anthrax later the same month. At admission, the first case showed a black depressed eschar and another smaller lesion on o...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Nicastri E,Vairo F,Mencarini P,Battisti A,Agrati C,Cimini E,Carrara S,D'Arezzo S,Adone R,Vulcano A,Iannetta M,Capone A,Petrosillo N,Fasanella A,Ippolito G,Italian Anthrax Team Members

更新日期：2019-06-01 00:00:00

abstract：:In 2010/11, the influenza season in England was marked by a relative increase in impact on the population compared to that seen during the 2009/10 pandemic, with the same influenza subtype, A(H1N1)pdm09, circulating. The peaks in critical care bed occupancy in both seasons coincided with peaks in influenza A(H1N1)pdm0...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Green HK,Ellis J,Galiano M,Watson JM,Pebody RG

更新日期：2013-06-06 00:00:00

abstract：:We report a case of anaphylaxis following meningococcal chemoprophylaxis of a healthcare worker, despite no history of direct contact with a patient who had meningococcal disease. The public health implications of this case are discussed. ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Giovanetti F

更新日期：2009-05-14 00:00:00

abstract：:Eight cases of psittacosis due to Chlamydia psittaci were identified in May 2013 among 15 individuals involved in chicken gutting activities on a mixed poultry farm in France. All cases were women between 42 and 67 years-old. Cases were diagnosed by serology and PCR of respiratory samples. Appropriate treatment was im...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Laroucau K,Aaziz R,Meurice L,Servas V,Chossat I,Royer H,de Barbeyrac B,Vaillant V,Moyen JL,Meziani F,Sachse K,Rolland P

更新日期：2015-06-18 00:00:00

abstract：:Since 1994, the incidence of gonorrhoea in Østfold county, Norway, has remained within the range of 1-8 cases per year, with 40% of cases being imported from abroad. On 20 January 2008, a general practitioner in the county diagnosed two seemingly unrelated domestic cases of gonorrhoea in three days and started contact...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Jakopanec I,Hassfjord JJ,Nilsen O,Larsen AL,Aavitsland P

更新日期：2008-06-05 00:00:00

abstract：:A questionnaire survey on the attitude of healthcare workers towards pandemic influenza vaccination showed low acceptance (17%) of the pandemic vaccine. Factors associated with vaccine uptake were acceptance of seasonal influenza vaccination, medical profession and age. The main reason for refusal of vaccination was f...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Rachiotis G,Mouchtouri VA,Kremastinou J,Gourgoulianis K,Hadjichristodoulou C

更新日期：2010-02-11 00:00:00

abstract：:Until recently the system for reporting infectious diseases in Greece was inadequate, but a new laboratory reporting system was introduced in 1998, in which collaborating laboratories throughout Greece report each week by e-mail or fax using standard form ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Hadjichristodoulou C,Nikolakopoulou E,Karabinis K,Karakou E,Markogiannakis A,Panoulis C,Lampiri M,Tassios P

更新日期：1999-06-01 00:00:00

abstract：:The first case of severe acute respiratory syndrome (SARS) in France was diagnosed in March 2003. We conducted a serological survey to assess whether or not asymptomatic persons who had been in contact with this patient during his infectious stage had been infected. They were interviewed and asked to provide a blood s...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Le Vu S,Yazdanpanah Y,Bitar D,Emmanuelli J,Bonmarin I,Desenclos JC

更新日期：2006-01-01 00:00:00

abstract：:A descriptive analysis of routine surveillance data on tuberculosis (TB) from 1995 to 1999 was performed in Austria. The federal states of Vienna and Upper Austria showed the highest yearly incidences for all five years. In general, however, a decrease of the yearly incidence was observed for all federal states except...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Strauss R,Fülöp G,Pfeifer C

更新日期：2003-01-01 00:00:00

abstract：:This paper reports the study of outbreaks of an acute exanthematous disease among children of three schools in the municipality of Braga (Portugal). Laboratory tests were performed for five cases, showing that the disease was not due to infection by measles or rubella virus, and infection with parvovirus B19 was confi...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Gonçalves G,Correia AM,Palminha P,Rebelo de Andrade H,Alves A

更新日期：2005-06-01 00:00:00

abstract：:Malaria incidence is reportedly declining steadily in many parts of the world, including in at least several African countries. The incidence of imported malaria is also declining in a number of European countries. However, incidence rates in travellers, both European tourists and the so called VFR (visiting friends a...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Bisoffi Z

更新日期：2008-12-18 00:00:00

abstract：:An outbreak of isoniazid-resistant tuberculosis first identified in London has now been ongoing for 20 years, making it the largest drug-resistant outbreak of tuberculosis documented to date worldwide. We identified culture-confirmed cases with indistinguishable molecular strain types and extracted demographic, clinic...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Smith CM,Trienekens SC,Anderson C,Lalor MK,Brown T,Story A,Fry H,Hayward AC,Maguire H

更新日期：2017-02-23 00:00:00

abstract：:Respiratory syncytial virus (RSV) surveillance is important to get insight into the burden of disease and epidemic pattern of RSV infection. This information is useful for healthcare resource allocation as well as the timing of preventive messages and palivizumab prophylaxis. For influenza surveillance the European In...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Meerhoff TJ,Mosnier A,Schellevis F,Paget WJ,EISS RSV Task Group.

更新日期：2009-10-08 00:00:00

abstract：:This paper describes the epidemiology and management of a prolonged outbreak of measles across the 2.7 million conurbation of Greater Manchester in the United Kingdom. Over a period of one year (from October 2012 to September 2013), over a thousand suspected measles cases (n = 1,073) were notified across Greater Manch...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Pegorie M,Shankar K,Welfare WS,Wilson RW,Khiroya C,Munslow G,Fiefield D,Bothra V,McCann R

更新日期：2014-12-11 00:00:00

abstract：:In May 2015, following a 30-year diphtheria-free interval in Catalonia, an unvaccinated 6-year-old child was diagnosed with diphtheria caused by toxigenic Corynebacterium diphtheriae. After a difficult search for equine-derived diphtheria antitoxin (DAT), the child received the DAT 4 days later but died at the end of ...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Jané M,Vidal MJ,Camps N,Campins M,Martínez A,Balcells J,Martin-Gomez MT,Bassets G,Herrera-León S,Foguet A,Maresma M,Follia N,Uriona S,Pumarola T

更新日期：2018-03-01 00:00:00

abstract：:Autochthonous hepatitis E virus (HEV) infection has been increasingly reported in Europe and the United States, mostly arising from genotype 3 and less frequently genotype 4. We report here on a patient with HEV genotype 3a infection complicated by Guillain-Barré syndrome in Portugal in December 2012. We draw attentio...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Santos L,Mesquita JR,Rocha Pereira N,Lima-Alves C,Serrão R,Figueiredo P,Reis J,Simões J,Nascimento M,Sarmento A

更新日期：2013-08-22 00:00:00

abstract：:BackgroundIn the Netherlands, echovirus type 6 (E6) is identified through clinical and environmental enterovirus surveillance (CEVS and EEVS). AimWe aimed to identify E6 transmission clusters and to assess the role of EEVS in surveillance and early warning of E6. MethodsWe included all E6 strains from CEVS and EEVS fr...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Monge S,Benschop K,Soetens L,Pijnacker R,Hahné S,Wallinga J,Duizer E

更新日期：2018-11-01 00:00:00

abstract：:A national hand hygiene promotion campaign based on the World Health Organization (WHO) multimodal, Clean Care is Safer Care campaign was launched in Italy in 2007. One hundred seventy-five hospitals from 14 of 20 Italian regions participated. Data were collected using methods and tools provided by the WHO campaign, t...

journal_title：Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

authors： Moro ML,Morsillo F,Nascetti S,Parenti M,Allegranzi B,Pompa MG,Pittet D

更新日期：2017-06-08 00:00:00