Evaluation of a restricted likelihood ratio test for mapping quantitative trait loci with extreme discordant sib pairs.

Abstract:

:Risch and Zhang recently proposed to use extreme discordant sib pairs for mapping quantitative trait loci. Here, it is shown that the set of genetically possible distributions of the number of marker alleles in such sib-pairs is described by two inequalities. Thus, a likelihood ratio test analogous to Holmans's possible triangle test for affected sib pairs can be defined. The performance of this test is compared to the mean test considered by Risch and Zhang. For most of the genetic models considered, the mean test is slightly more powerful than the restricted likelihood ratio test. However, for models with a rare recessive gene (or equivalently a common dominant gene), the restricted likelihood ratio test is much more powerful.

journal_name

Ann Hum Genet

journal_title

Annals of human genetics

authors

Knapp M

doi

10.1046/j.1469-1809.1998.6210075.x

subject

Has Abstract

pub_date

1998-01-01 00:00:00

pages

75-87

issue

Pt 1

eissn

0003-4800

issn

1469-1809

journal_volume

62

pub_type

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