Abstract:
:In this paper, we propose a new method based on the 2-D graphical representation to analyze the similarity of biological sequences and classify the protein secondary structure sequences. Instead of computing some characteristics from the distance matrix, the average area surrounded by the curve and X axis is computed as a new invariant. The new method is tested on two sets: the coding sequences of 30 mitochondrial genes from NCBI and 12 protein secondary structure sequences. The similarity/disimilarity and phylogenetic tree (dendrogram) of these sequences verify the validity of our method.
journal_name
J Biomol Struct Dynjournal_title
Journal of biomolecular structure & dynamicsauthors
Huang W,Guo Y,Zhang Jdoi
10.1080/07391102.2009.10507275subject
Has Abstractpub_date
2009-04-01 00:00:00pages
599-608issue
5eissn
0739-1102issn
1538-0254pii
d=3035&c=4280&p=17190&do=detailjournal_volume
26pub_type
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journal_title:Journal of biomolecular structure & dynamics
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journal_title:Journal of biomolecular structure & dynamics
pub_type: 杂志文章
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