Novel multiplex oligonucleotide-conjugated bead suspension array for rapid identification of enterovirus 71 subgenogroups.

Abstract:

:A high-throughput multiplex bead suspension array was developed for the rapid subgenogrouping of EV71 strains, based on single nucleotide polymorphisms observed within the VP1 region with a high sensitivity as low as 1 PFU. Of 33 viral isolates and 55 clinical samples, all EV71 strains were successfully detected and correctly subgenogrouped.

journal_name

J Clin Microbiol

authors

Wu Y,Tan EL,Yeo A,Chan KP,Nishimura H,Cardosa MJ,Poh CL,Quak SH,Chow VT

doi

10.1128/JCM.01871-10

subject

Has Abstract

pub_date

2011-01-01 00:00:00

pages

419-22

issue

1

eissn

0095-1137

issn

1098-660X

pii

JCM.01871-10

journal_volume

49

pub_type

杂志文章
  • Molecular identification of Mycobacterium avium subsp. silvaticum by duplex high-resolution melt analysis and subspecies-specific real-time PCR.

    abstract::Accurate identification of mycobacterial species and subspecies is essential to evaluate their significance and to perform epidemiological studies. The subspecies of Mycobacterium avium have different attributes but coincide in their zoonotic potential. Our knowledge about M. avium subsp. silvaticum is limited, since ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.03556-14

    authors: Rónai Z,Csivincsik Á,Dán Á

    更新日期:2015-05-01 00:00:00

  • Suitability of a rapid immunochromatographic test for detection of antibodies to human immunodeficiency virus in Ghana, West Africa.

    abstract::In West African countries such as Ghana, efficient human immunodeficiency virus (HIV) testing is a priority in the fight against AIDS. A new immunochromatographic rapid test, Determine HIV-1/2 (Abbott Diagnostics, North Chicago, Ill.), that detects antibodies against HIV type 1 (HIV-1) and/or HIV-2 was evaluated using...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.39.7.2572-2575.2001

    authors: Aidoo S,Ampofo WK,Brandful JA,Nuvor SV,Ansah JK,Nii-Trebi N,Barnor JS,Apeagyei F,Sata T,Ofori-Adjei D,Ishikawa K

    更新日期:2001-07-01 00:00:00

  • Escherichia coli adherence to HEp-2 cells with prefixed cells.

    abstract::We describe a new method which uses cold absolute methanol-prefixed cells for adherence of enteropathogenic Escherichia coli to HEp-2 cells. We found that a method using bacteria grown in Penassay broth to 10(6) to 10(7) CFU/ml and incubated with prefixed cells for 3 h at 37 degrees C, showed 100% sensitivity and spec...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.5.1414-1417.1995

    authors: Zepeda-Lopez HM,Gonzalez-Lugo GM

    更新日期:1995-05-01 00:00:00

  • Evaluation of a microtiter plate fluorescent-antibody assay for rapid detection of human cytomegalovirus infection.

    abstract::The use of monoclonal antibody (MAb) p63-27, which is reactive with the major immediate-early human cytomegalovirus (HCMV) protein pp72, was explored for the rapid diagnosis of HCMV viruria. The rapid assay detected all but 1 of 19 specimens identified by standard virus isolation methods from 1,676 newborn urine speci...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.30.3.721-723.1992

    authors: Boppana SB,Smith RJ,Stagno S,Britt WJ

    更新日期:1992-03-01 00:00:00

  • Evaluation of PASCO MIC-ID system for identifying gram-negative bacilli.

    abstract::A production model of the semi-automated PASCO MIC-ID system (PASCO Laboratories, Wheat Ridge, Colo.) was evaluated with 122 groups or species of gram-negative bacilli, which included typical (499 cultures) and atypical (37 cultures) strains of fermenters and nonfermenters. The PASCO system identified 90.9% of 536 cul...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.25.12.2363-2366.1987

    authors: Rhoden DL,Schable B,Smith PB

    更新日期:1987-12-01 00:00:00

  • Determination of the range of antibacterial activity by use of viable counts.

    abstract::The activity of three aminoglycosides and six beta-lactam antibiotics on strains of Escherichia coli, Klebsiella pneumoniae, Proteus mirabilis, Pseudomonas aeruginosa, Staphylococcus aureus, and enterococci was studied. The minimal inhibitory concentrations (MICs), the minimal bactericidal concentrations (MBCs), and t...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.16.1.70-76.1982

    authors: Lorian V,Atkinson BA

    更新日期:1982-07-01 00:00:00

  • Sexual and in-contact transmission of asinine strain of equine arteritis virus among donkeys.

    abstract::Two in a group of five naturally seropositive donkey stallions were found to shed equine arteritis virus (EAV) in their semen as demonstrated by virus isolation. Direct intramuscular inoculation of sonicated semen from one virus-shedding stallion (S3) caused clinical disease in two donkeys from which virus was recover...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.12.3296-3299.1995

    authors: Paweska JT,Volkmann DH,Barnard BJ,Chirnside ED

    更新日期:1995-12-01 00:00:00

  • Diagnosis of human leptospirosis by monoclonal antibody-based antigen detection in urine.

    abstract::Hybridomas secreting specific monoclonal antibodies (MAb) to all members of the genus Leptospira (clone LF9) and those that are specific only to the pathogenic species (clones LD5 and LE1) were produced. MAb LF9, which was immunoglobulin G1 (IgG1), reacted to a 38-kDa component of the sodium dodecyl sulfate-polyacryla...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/jcm.40.3.480-489.2002

    authors: Saengjaruk P,Chaicumpa W,Watt G,Bunyaraksyotin G,Wuthiekanun V,Tapchaisri P,Sittinont C,Panaphut T,Tomanakan K,Sakolvaree Y,Chongsa-Nguan M,Mahakunkijcharoen Y,Kalambaheti T,Naigowit P,Wambangco MA,Kurazono H,Hayashi H

    更新日期:2002-02-01 00:00:00

  • Hemadsorption immunosorbent technique for the detection of dengue immunoglobulin M antibody.

    abstract::We developed a highly specific, sensitive, and economical hemadsorption immunosorbent technique for the detection of dengue-specific immunoglobulin M (IgM) antibody. The technique is based on the reaction of human sera with anti-human IgM immobilized onto a solid phase followed by the detection of dengue-specific IgM ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.23.1.170-174.1986

    authors: Gunasegaran K,Lim TW,Ahmed A,Aaskov JG,Lam SK,Pang T

    更新日期:1986-01-01 00:00:00

  • Rapid, modified oxidase test for oxidase-variable bacterial isolates.

    abstract::A modified oxidase reagent, 1% tetramethyl-p-phenylenediamine in dimethyl sulfoxide, proved superior to the routinely used 1% aqueous tetramethyl-p-phenylenediamine dihydrochloride in detecting weakly oxidase-positive gram-negative bacteria after 24 h of growth on agar media (40 of 40 positive versus 22 of 40 positive...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.16.4.772-774.1982

    authors: Tarrand JJ,Gröschel DH

    更新日期:1982-10-01 00:00:00

  • Mixed bacterial meningitis due to Streptococcus pneumoniae and Neisseria meningitidis in an 18-month-old child.

    abstract::We report an unusual case of culture-proven pneumococcal and meningococcal mixed meningitis in an 18-month-old girl. The patient responded well to antimicrobial therapy and recovered completely without sequelae. No underlying condition could be demonstrated except a rhinitis of unknown etiology 2 days before the onset...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章,评审

    doi:10.1128/JCM.43.3.1477-1479.2005

    authors: Marchandin H,Ventura V,Alonso JM,Van de Perre P

    更新日期:2005-03-01 00:00:00

  • Detection of synergistic hemolytic activity of Staphylococcus aureus with the Cathra replicator.

    abstract::A replicator method for screening Staphylococcus aureus isolates for synergistic hemolytic activity is described. The technique should also be useful for assessing the hemolytic activity of staphylococci and streptococci on different lots or brands of blood agar because the inoculum and the distances between spot inoc...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.21.5.835-837.1985

    authors: Boyce JM

    更新日期:1985-05-01 00:00:00

  • Accuracy of Burkholderia pseudomallei identification using the API 20NE system and a latex agglutination test.

    abstract::In an evaluation of the API 20NE for the identification of Burkholderia spp., 792/800 (99%) Burkholderia pseudomallei and 17/19 (89%) B. cepacia isolates were correctly identified but 10 B. mallei and 98 B. thailandensis isolates were not correctly identified. A latex agglutination test was positive for 796/800 (99.5%...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00935-07

    authors: Amornchai P,Chierakul W,Wuthiekanun V,Mahakhunkijcharoen Y,Phetsouvanh R,Currie BJ,Newton PN,van Vinh Chau N,Wongratanacheewin S,Day NP,Peacock SJ

    更新日期:2007-11-01 00:00:00

  • Amplification of human papillomavirus type 16 transforming genes from cervical cancer biopsies and lymph nodes of Hungarian patients.

    abstract::We have used a polymerase chain reaction (PCR) to examine cervical cancer biopsy specimens and pelvic lymph nodes for the presence of human papillomavirus type 16 (HPV 16) DNA. Of the 75 cervical specimens tested, 36 (48%) were positive for HPV 16 in the PCR. A total of 65 pelvic lymph nodes removed during radical sur...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.30.1.233-236.1992

    authors: Czeglédy J,Póka R,Veress G,Gergely L

    更新日期:1992-01-01 00:00:00

  • Evaluation of swabs, transport media, and specimen transport conditions for optimal detection of viruses by PCR.

    abstract::Depletion of swabs and viral transport medium during epidemics may prompt the use of unvalidated alternatives. Swabs collected and transported dry or in saline were compared to commercially available swab/medium combinations for PCR detection of influenza, enterovirus, herpes simplex virus, and adenovirus. Each was de...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.06551-11

    authors: Druce J,Garcia K,Tran T,Papadakis G,Birch C

    更新日期:2012-03-01 00:00:00

  • Performance of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Aspergillus, Scedosporium, and Fusarium spp. in the Australian Clinical Setting.

    abstract::We developed an Australian database for the identification of Aspergillus, Scedosporium, and Fusarium species (n = 28) by matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS). In a challenge against 117 isolates, species identification significantly improved when the in-house-bui...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00906-16

    authors: Sleiman S,Halliday CL,Chapman B,Brown M,Nitschke J,Lau AF,Chen SC

    更新日期:2016-08-01 00:00:00

  • Enzyme-linked immunosorbent assay compared with neutralization tests for evaluation of live mumps vaccines.

    abstract::Mumps-specific antibody levels before and after vaccination with live mumps vaccines were determined by enzyme-linked immunosorbent assay (ELISA) and neutralization tests. A correlation was found between neutralization titers and optical density in ELISA. However, postvaccination sera from some vaccinees who failed to...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.19.1.21-25.1984

    authors: Sakata H,Hishiyama M,Sugiura A

    更新日期:1984-01-01 00:00:00

  • Extended-spectrum-beta-lactamase production in a Salmonella enterica serotype Typhi strain from the Philippines.

    abstract::A Salmonella enterica serotype Typhi strain was cultured from blood and fecal samples from a 54-year-old man with fever and diarrhea. He had returned from travel to the Philippines a few days earlier. Phenotypic and genotypic analysis confirmed the production of the SHV-12 extended-spectrum beta-lactamase. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00676-08

    authors: Al Naiemi N,Zwart B,Rijnsburger MC,Roosendaal R,Debets-Ossenkopp YJ,Mulder JA,Fijen CA,Maten W,Vandenbroucke-Grauls CM,Savelkoul PH

    更新日期:2008-08-01 00:00:00

  • Discovery of Novel Pneumococcal Serotype 35D, a Natural WciG-Deficient Variant of Serotype 35B.

    abstract::Pneumococcus (Streptococcus pneumoniae) remains a significant cause of morbidity and mortality, especially among those at the extremes of age. Its capsular polysaccharide is essential for systemic virulence. Over 90 serologically distinct pneumococcal capsular polysaccharides (serotypes) are recognized, but they are u...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00054-17

    authors: Geno KA,Saad JS,Nahm MH

    更新日期:2017-05-01 00:00:00

  • Molecular parameters for precise diagnosis of asymptomatic Epstein-Barr virus reactivation in healthy carriers.

    abstract::Asymptomatic Epstein-Barr virus (EBV) reactivations periodically occur in oral mucosa-associated lymphoid tissues. Until now, EBV reactivation has been diagnosed by serologic profiles that suggest virus replication. Serologic responses, however, are delayed and do not necessarily indicate ongoing replicative activity....

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/jcm.41.12.5419-5428.2003

    authors: Maurmann S,Fricke L,Wagner HJ,Schlenke P,Hennig H,Steinhoff J,Jabs WJ

    更新日期:2003-12-01 00:00:00

  • Impact of changes in Clostridium difficile testing practices on stool rejection policies and C. difficile positivity rates across multiple laboratories in the United States.

    abstract::We describe the adoption of nucleic acid amplification tests (NAAT) for Clostridium difficile diagnosis and their impact on stool rejection policies and C. difficile positivity rates. Of the laboratories with complete surveys, 51 (43%) reported using NAAT in 2011. Laboratories using NAAT had stricter rejection policie...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.02177-13

    authors: Cohen J,Limbago B,Dumyati G,Holzbauer S,Johnston H,Perlmutter R,Dunn J,Nadle J,Lyons C,Phipps E,Beldavs Z,Clark LA,Lessa FC,CDC's Clostridium difficile Infection Surveillance Investigators.

    更新日期:2014-02-01 00:00:00

  • Genotyping reveals the presence of a predominant genotype of Coxiella burnetii in consumer milk products.

    abstract::Real-time PCR shows the widespread presence of Coxiella burnetii DNA in a broad range of commercially available milk and milk products. MLVA genotyping shows that this is the result of the presence of a predominant C. burnetii genotype in the dairy cattle population. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.06831-11

    authors: Tilburg JJ,Roest HJ,Nabuurs-Franssen MH,Horrevorts AM,Klaassen CH

    更新日期:2012-06-01 00:00:00

  • Detection of hepatitis C virus RNA: comparison of one-stage polymerase chain reaction (PCR) with nested-set PCR.

    abstract::We evaluated a new hepatitis C virus RNA assay based on one-stage PCR followed by liquid hybridization with an oligonucleotide probe and compared it with nested-set PCR. The one-stage and nested-set PCR assays had identical sensitivities in analytical experiments and showed 100% concordance when clinical specimens wer...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.31.2.289-291.1993

    authors: Gretch DR,Wilson JJ,Carithers RL Jr,dela Rosa C,Han JH,Corey L

    更新日期:1993-02-01 00:00:00

  • Pyelonephritis and urosepsis caused by Streptococcus pneumoniae.

    abstract::This report presents the case of a patient with a massive pyelonephritis and a urosepsis caused by Streptococcus pneumoniae. This case is unusual as the focus was distant from the respiratory tract, the usual primary site of infection caused by this organism. No other primary site of infection was documented. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.42.9.4383-4385.2004

    authors: Dufke S,Kunze-Kronawitter H,Schubert S

    更新日期:2004-09-01 00:00:00

  • Evaluation of the Etest and disk diffusion methods for determining susceptibilities of 235 bloodstream isolates of Candida glabrata to fluconazole and voriconazole.

    abstract::The performances of the Etest and the disk diffusion methods for testing of the susceptibilities of 235 Candida glabrata isolates to fluconazole and voriconazole were compared with that of the National Committee for Clinical Laboratory Standards (NCCLS) approved standard broth microdilution (BMD) method. The NCCLS met...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/jcm.41.5.1875-1880.2003

    authors: Pfaller MA,Diekema DJ,Boyken L,Messer SA,Tendolkar S,Hollis RJ

    更新日期:2003-05-01 00:00:00

  • Distinguishing Candida species by beta-N-acetylhexosaminidase activity.

    abstract::A variety of fungi produce the hydrolytic enzyme beta-N-acetylhexosaminidase (HexNAcase), which can be readily detected in assays by using p-nitrophenyl-N-acetyl-beta-D-glucosaminide as a substrate. In the present study we developed a microtiter plate-based HexNAcase assay for distinguishing Candida albicans and Candi...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.39.6.2089-2097.2001

    authors: Niimi K,Shepherd MG,Cannon RD

    更新日期:2001-06-01 00:00:00

  • Detection of the microsporidian parasite Enterocytozoon bieneusi in specimens from patients with AIDS by PCR.

    abstract::Microsporidia are protozoa parasites responsible for significant gastrointestinal disease in patients infected with human immunodeficiency virus. We evaluated a PCR assay of stool samples, duodenal aspirates, and biopsy specimens from patients with Enterocytozoon bieneusi infection. A 210-bp DNA fragment of the unique...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.34.12.3230-3232.1996

    authors: Velásquez JN,Carnevale S,Guarnera EA,Labbé JH,Chertcoff A,Cabrera MG,Rodríguez MI

    更新日期:1996-12-01 00:00:00

  • Evaluation of the Rapidec Carba NP Test for Detection of Carbapenemases in Enterobacteriaceae.

    abstract::This study evaluated the performance of the Rapidec Carba NP test, which was introduced recently into the market for the detection of carbapenemase production in a broad spectrum of β-lactamase-producing Enterobacteriaceae clinical isolates. In total, 252 clinical Enterobacteriaceae isolates that had been genetically ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.02327-15

    authors: Hombach M,von Gunten B,Castelberg C,Bloemberg GV

    更新日期:2015-12-01 00:00:00

  • Molecular characterization of Haemophilus ducreyi isolates from different geographical locations.

    abstract::The technique of random amplified polymorphic DNA (RAPD) was adapted and optimized to study Haemophilus ducreyi isolates. A panel of 43 strains isolated from chancroid patients from different countries in Africa, Europe, North America, and Asia were characterized. The strains were also studied with respect to lipoolig...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.44.1.132-137.2006

    authors: Mbwana J,Bölin I,Lyamuya E,Mhalu F,Lagergård T

    更新日期:2006-01-01 00:00:00

  • Rapid identification of obligately anaerobic gram-positive cocci using high-performance liquid chromatography.

    abstract::High-performance liquid chromatography was evaluated as a rapid means of identifying obligately anaerobic gram-positive cocci of medical interest. Isolates were inoculated into a defined chemical medium consisting primarily of amino acids and were incubated aerobically for 1 h at 35 degrees C. After removal of organis...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.25.6.996-1001.1987

    authors: Harpold DJ,Wasilauskas BL

    更新日期:1987-06-01 00:00:00