A CCR4-NOT Transcription Complex, Subunit 1, CNOT1, Variant Associated with Holoprosencephaly.

Abstract:

:Holoprosencephaly is the incomplete separation of the forebrain during embryogenesis. Both genetic and environmental etiologies have been determined for holoprosencephaly; however, a genetic etiology is not found in most cases. In this report, we present two unrelated individuals with semilobar holoprosencephaly who have the identical de novo missense variant in the gene CCR4-NOT transcription complex, subunit 1 (CNOT1). The variant (c.1603C>T [p.Arg535Cys]) is predicted to be deleterious and is not present in public databases. CNOT1 has not been previously associated with holoprosencephaly or other brain malformations. In situ hybridization analyses of mouse embryos show that Cnot1 is expressed in the prosencephalic neural folds at gestational day 8.25 during the critical period for subsequent forebrain division. Combining human and mouse data, we show that CNOT1 is associated with incomplete forebrain division.

journal_name

Am J Hum Genet

authors

Kruszka P,Berger SI,Weiss K,Everson JL,Martinez AF,Hong S,Anyane-Yeboa K,Lipinski RJ,Muenke M

doi

10.1016/j.ajhg.2019.03.017

subject

Has Abstract

pub_date

2019-05-02 00:00:00

pages

990-993

issue

5

eissn

0002-9297

issn

1537-6605

pii

S0002-9297(19)30113-2

journal_volume

104

pub_type

杂志文章
  • Localization of human gene loci using spontaneous chromosome rearrangements in human-Chinese hamster somatic cell hybrids.

    abstract::Analysis of human-Chinese hamster somatic cell hybrids with spontaneously derived chromosome structural changes has provided data for the regional and subregional localization of gene loci which have previously been assigned to human chromosomes 2, 12, and X. Correlation of the expression of human gene loci with the h...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Hamerton JL,Mohandas T,McAlpine J

    更新日期:1975-09-01 00:00:00

  • Absence of BiP co-chaperone DNAJC3 causes diabetes mellitus and multisystemic neurodegeneration.

    abstract::Diabetes mellitus and neurodegeneration are common diseases for which shared genetic factors are still only partly known. Here, we show that loss of the BiP (immunoglobulin heavy-chain binding protein) co-chaperone DNAJC3 leads to diabetes mellitus and widespread neurodegeneration. We investigated three siblings with ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2014.10.013

    authors: Synofzik M,Haack TB,Kopajtich R,Gorza M,Rapaport D,Greiner M,Schönfeld C,Freiberg C,Schorr S,Holl RW,Gonzalez MA,Fritsche A,Fallier-Becker P,Zimmermann R,Strom TM,Meitinger T,Züchner S,Schüle R,Schöls L,Prokisch H

    更新日期:2014-12-04 00:00:00

  • Wilson disease in Iceland: a clinical and genetic study.

    abstract::A survey of Wilson disease in Iceland has revealed two large kindreds with affected individuals. We have carried out studies of haplotypes of dinucleotide repeat polymorphisms (CA repeats) flanking the Wilson disease gene. The same mutation, a 7-bp deletion, is present in both families, and the clinical features are s...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Thomas GR,Jensson O,Gudmundsson G,Thorsteinsson L,Cox DW

    更新日期:1995-05-01 00:00:00

  • Genomewide linkage scan identifies a novel susceptibility locus for restless legs syndrome on chromosome 9p.

    abstract::Restless legs syndrome (RLS) is a common neurological disorder that affects 5%-12% of all whites. To genetically dissect this complex disease, we characterized 15 large and extended multiplex pedigrees, consisting of 453 subjects (134 affected with RLS). A familial aggregation analysis was performed, and SAGE FCOR was...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/420772

    authors: Chen S,Ondo WG,Rao S,Li L,Chen Q,Wang Q

    更新日期:2004-05-01 00:00:00

  • A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other.

    abstract::In this report, we describe a simple correction for multiple testing of single-nucleotide polymorphisms (SNPs) in linkage disequilibrium (LD) with each other, on the basis of the spectral decomposition (SpD) of matrices of pairwise LD between SNPs. This method provides a useful alternative to more computationally inte...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/383251

    authors: Nyholt DR

    更新日期:2004-04-01 00:00:00

  • Linkage of otopalatodigital syndrome type 2 (OPD2) to distal Xq28: evidence for allelism with OPD1.

    abstract::Otopalatodigital syndrome type 1 (OPD1) is an X-linked semidominant condition characterized by malformations of the skeleton, auditory apparatus, and palate. Previous studies have established linkage to a 16-cM region of Xq27-q28. A proposed allelic variant of OPD1, termed "OPD2," is associated with a more severe, fre...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/321280

    authors: Robertson SP,Walsh S,Oldridge M,Gunn T,Becroft D,Wilkie AO

    更新日期:2001-07-01 00:00:00

  • Evidence for the close linkage between lymphocyte cytosol polypeptide with molecular weight of 64,000 (LCP1) and esterase D.

    abstract::The genetic linkage of the loci for lymphocyte cytosol polypeptide with molecular weight of 64,000 (LCP1) and esterase (ESD) were examined by two-dimensional gel electrophoresis using blood from four informative families. No recombinants were observed in the four families totaling 17 children, giving a summed lod scor...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Kondo I,Hamaguchi H

    更新日期:1985-11-01 00:00:00

  • Patterns of ancestral human diversity: an analysis of Alu-insertion and restriction-site polymorphisms.

    abstract::We have analyzed 35 widely distributed, polymorphic Alu loci in 715 individuals from 31 world populations. The average frequency of Alu insertions (the derived state) is lowest in Africa (.42) but is higher and similar in India (.55), Europe (.56), and Asia (.57). A comparison with 30 restriction-site polymorphisms (R...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/318793

    authors: Watkins WS,Ricker CE,Bamshad MJ,Carroll ML,Nguyen SV,Batzer MA,Harpending HC,Rogers AR,Jorde LB

    更新日期:2001-03-01 00:00:00

  • Topical enzyme-replacement therapy restores transglutaminase 1 activity and corrects architecture of transglutaminase-1-deficient skin grafts.

    abstract::Transglutaminase-1 (TG1)-deficient autosomal-recessive congenital ichthyosis (ARCI) is a rare and severe genetic skin disease caused by mutations in TGM1. It is characterized by collodion babies at birth, dramatically increased transepidermal water loss (TEWL), and lifelong pronounced scaling. The disease has a tremen...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2013.08.003

    authors: Aufenvenne K,Larcher F,Hausser I,Duarte B,Oji V,Nikolenko H,Del Rio M,Dathe M,Traupe H

    更新日期:2013-10-03 00:00:00

  • The human ryanodine receptor gene: its mapping to 19q13.1, placement in a chromosome 19 linkage group, and exclusion as the gene causing myotonic dystrophy.

    abstract::The recent cloning of cDNA encoding the Ca++ release channel (ryanodine receptor) of human sarcoplasmic reticulum has enabled us to use somatic cell hybrids to localize the ryanodine receptor gene (RYR) to the proximal long arm of human chromosome 19. Studies with additional hybrids containing deletions or translocati...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: MacKenzie AE,Korneluk RG,Zorzato F,Fujii J,Phillips M,Iles D,Wieringa B,Leblond S,Bailly J,Willard HF

    更新日期:1990-06-01 00:00:00

  • Promoter and 3'-untranslated-region haplotypes in the vitamin d receptor gene predispose to osteoporotic fracture: the rotterdam study.

    abstract::Polymorphisms of the vitamin D receptor gene (VDR) have been shown to be associated with several complex diseases, including osteoporosis, but the mechanisms are unknown and study results have been inconsistent. We therefore determined sequence variation across the major relevant parts of VDR, including construction o...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/497438

    authors: Fang Y,van Meurs JB,d'Alesio A,Jhamai M,Zhao H,Rivadeneira F,Hofman A,van Leeuwen JP,Jehan F,Pols HA,Uitterlinden AG

    更新日期:2005-11-01 00:00:00

  • X-linked dominant cone-rod degeneration: linkage mapping of a new locus for retinitis pigmentosa (RP 15) to Xp22.13-p22.11.

    abstract::Retinitis pigmentosa is the name given to a heterogeneous group of hereditary retinal degenerations characterized by progressive visual field loss, pigmentary changes of the retina, abnormal electroretinograms, and, frequently, night blindness. In this study, we investigated a family with dominant cone-rod degeneratio...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: McGuire RE,Sullivan LS,Blanton SH,Church MW,Heckenlively JR,Daiger SP

    更新日期:1995-07-01 00:00:00

  • Linkage analysis of the apolipoprotein C2 gene and myotonic dystrophy on human chromosome 19 reveals linkage disequilibrium in a French-Canadian population.

    abstract::The gene for human apolipoprotein C2 (APOC2), situated on the proximal long arm of chromosome 19, is closely linked to the gene for the most common form of adult muscular dystrophy, myotonic dystrophy (DM). Six APOC2 RFLPs (TaqI, BglI, BanI, BamHI, NcoI, and AvaII) have been identified to date. We have conducted a com...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: MacKenzie AE,MacLeod HL,Hunter AG,Korneluk RG

    更新日期:1989-01-01 00:00:00

  • WNT1 mutations in families affected by moderately severe and progressive recessive osteogenesis imperfecta.

    abstract::Osteogenesis imperfecta (OI) is a heritable disorder that ranges in severity from death in the perinatal period to an increased lifetime risk of fracture. Mutations in COL1A1 and COL1A2, which encode the chains of type I procollagen, result in dominant forms of OI, and mutations in several other genes result in recess...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2013.02.009

    authors: Pyott SM,Tran TT,Leistritz DF,Pepin MG,Mendelsohn NJ,Temme RT,Fernandez BA,Elsayed SM,Elsobky E,Verma I,Nair S,Turner EH,Smith JD,Jarvik GP,Byers PH

    更新日期:2013-04-04 00:00:00

  • Molecular analysis of recombination in a family with Duchenne muscular dystrophy and a large pericentric X chromosome inversion.

    abstract::It has been demonstrated in animal studies that, in animals heterozygous for pericentric chromosomal inversions, loop formation is greatly reduced during meiosis. This results in absence of recombination within the inverted segment, with recombination seen only outside the inversion. A recent study in yeast has shown ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Shashi V,Golden WL,Allinson PS,Blanton SH,von Kap-Herr C,Kelly TE

    更新日期:1996-06-01 00:00:00

  • Homozygous Mutations in WEE2 Cause Fertilization Failure and Female Infertility.

    abstract::Fertilization is a fundamental process of development and is a prerequisite for successful human reproduction. In mice, although several receptor proteins have been shown to play important roles in the process of fertilization, only three genes have been shown to cause fertilization failure and infertility when delete...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2018.02.015

    authors: Sang Q,Li B,Kuang Y,Wang X,Zhang Z,Chen B,Wu L,Lyu Q,Fu Y,Yan Z,Mao X,Xu Y,Mu J,Li Q,Jin L,He L,Wang L

    更新日期:2018-04-05 00:00:00

  • Ataxia-Pancytopenia Syndrome Is Caused by Missense Mutations in SAMD9L.

    abstract::Ataxia-pancytopenia (AP) syndrome is characterized by cerebellar ataxia, variable hematologic cytopenias, and predisposition to marrow failure and myeloid leukemia, sometimes associated with monosomy 7. Here, in the four-generation family UW-AP, linkage analysis revealed four regions that provided the maximal LOD scor...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2016.04.009

    authors: Chen DH,Below JE,Shimamura A,Keel SB,Matsushita M,Wolff J,Sul Y,Bonkowski E,Castella M,Taniguchi T,Nickerson D,Papayannopoulou T,Bird TD,Raskind WH

    更新日期:2016-06-02 00:00:00

  • Application of DNA-DNA hybridization of dual labeled probes to the detection of trisomy 21, monosomy 21, and sex determination.

    abstract::Chromosomal aneuploidy is usually identified by cytogenetic methods. However, for some purposes it would be desirable to have an easier method of recognizing specific trisomies or monosomies. We have devised such an assay. It involves the simultaneous hybridization of two chromosome-specific DNA probes labeled with di...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Dahl HH,Choo KH,Danks DM

    更新日期:1988-10-01 00:00:00

  • Gain-of-function mutations in SCN11A cause familial episodic pain.

    abstract::Many ion channel genes have been associated with human genetic pain disorders. Here we report two large Chinese families with autosomal-dominant episodic pain. We performed a genome-wide linkage scan with microsatellite markers after excluding mutations in three known genes (SCN9A, SCN10A, and TRPA1) that cause simila...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2013.09.016

    authors: Zhang XY,Wen J,Yang W,Wang C,Gao L,Zheng LH,Wang T,Ran K,Li Y,Li X,Xu M,Luo J,Feng S,Ma X,Ma H,Chai Z,Zhou Z,Yao J,Zhang X,Liu JY

    更新日期:2013-11-07 00:00:00

  • Lipoic acid synthetase deficiency causes neonatal-onset epilepsy, defective mitochondrial energy metabolism, and glycine elevation.

    abstract::Lipoic acid is an essential prosthetic group of four mitochondrial enzymes involved in the oxidative decarboxylation of pyruvate, α-ketoglutarate, and branched chain amino acids and in the glycine cleavage. Lipoic acid is synthesized stepwise within mitochondria through a process that includes lipoic acid synthetase. ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2011.11.011

    authors: Mayr JA,Zimmermann FA,Fauth C,Bergheim C,Meierhofer D,Radmayr D,Zschocke J,Koch J,Sperl W

    更新日期:2011-12-09 00:00:00

  • OUTRIDER: A Statistical Method for Detecting Aberrantly Expressed Genes in RNA Sequencing Data.

    abstract::RNA sequencing (RNA-seq) is gaining popularity as a complementary assay to genome sequencing for precisely identifying the molecular causes of rare disorders. A powerful approach is to identify aberrant gene expression levels as potential pathogenic events. However, existing methods for detecting aberrant read counts ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2018.10.025

    authors: Brechtmann F,Mertes C,Matusevičiūtė A,Yépez VA,Avsec Ž,Herzog M,Bader DM,Prokisch H,Gagneur J

    更新日期:2018-12-06 00:00:00

  • The gene for the ataxia-telangiectasia variant, Nijmegen breakage syndrome, maps to a 1-cM interval on chromosome 8q21.

    abstract::Nijmegen breakage syndrome (NBS; Seemanová II syndrome) and Berlin breakage syndrome (BBS), also known as ataxia-telangiectasia variants, are two clinically indistinguishable autosomal recessive familial cancer syndromes that share with ataxia-telangiectasia similar cellular, immunological, and chromosomal but not cli...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Saar K,Chrzanowska KH,Stumm M,Jung M,Nürnberg G,Wienker TF,Seemanová E,Wegner RD,Reis A,Sperling K

    更新日期:1997-03-01 00:00:00

  • Whole-genome screening in ankylosing spondylitis: evidence of non-MHC genetic-susceptibility loci.

    abstract::Ankylosing spondylitis (AS) is a common inflammatory arthritis predominantly affecting the axial skeleton. Susceptibility to the disease is thought to be oligogenic. To identify the genes involved, we have performed a genomewide scan in 185 families containing 255 affected sibling pairs. Two-point and multipoint nonpa...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/319509

    authors: Laval SH,Timms A,Edwards S,Bradbury L,Brophy S,Milicic A,Rubin L,Siminovitch KA,Weeks DE,Calin A,Wordsworth BP,Brown MA

    更新日期:2001-04-01 00:00:00

  • Primary autosomal recessive microcephaly: MCPH5 maps to 1q25-q32.

    abstract::Primary microcephaly is thought to result from genetic defects of the developmental program that generates large brain hemispheres in humans. Autosomal recessive inheritance is likely in most familial cases, and four loci were recently mapped by homozygosity. We report homozygosity mapping of a new locus, MCPH5, with ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/316909

    authors: Jamieson CR,Fryns JP,Jacobs J,Matthijs G,Abramowicz MJ

    更新日期:2000-12-01 00:00:00

  • A spectrum of mutations in the second gene for autosomal dominant polycystic kidney disease (PKD2).

    abstract::Recently the second gene for autosomal dominant polycystic kidney disease (ADPKD), located on chromosome 4q21-q22, has been cloned and characterized. The gene encodes an integral membrane protein, polycystin-2, that shows amino acid similarity to the PKD1 gene product and to the family of voltage-activated calcium (an...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1086/515497

    authors: Veldhuisen B,Saris JJ,de Haij S,Hayashi T,Reynolds DM,Mochizuki T,Elles R,Fossdal R,Bogdanova N,van Dijk MA,Coto E,Ravine D,Nørby S,Verellen-Dumoulin C,Breuning MH,Somlo S,Peters DJ

    更新日期:1997-09-01 00:00:00

  • HLA and the inheritance of multiple sclerosis: linkage analysis of 72 pedigrees.

    abstract::Linkage analysis of 72 pedigrees by the maximum-likelihood method provides evidence of linkage between HLA and the hypothesized multiple sclerosis susceptibility gene (MSSG) for both the dominant and recessive models of inheritance and for penetrance values ranging from 5%--65% (or higher). This MSSG, if it exists, is...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Tiwari JL,Hodge SE,Terasaki PI,Spence MA

    更新日期:1980-01-01 00:00:00

  • In-frame mutations in exon 1 of SKI cause dominant Shprintzen-Goldberg syndrome.

    abstract::Shprintzen-Goldberg syndrome (SGS) is characterized by severe marfanoid habitus, intellectual disability, camptodactyly, typical facial dysmorphism, and craniosynostosis. Using family-based exome sequencing, we identified a dominantly inherited heterozygous in-frame deletion in exon 1 of SKI. Direct sequencing of SKI ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2012.10.002

    authors: Carmignac V,Thevenon J,Adès L,Callewaert B,Julia S,Thauvin-Robinet C,Gueneau L,Courcet JB,Lopez E,Holman K,Renard M,Plauchu H,Plessis G,De Backer J,Child A,Arno G,Duplomb L,Callier P,Aral B,Vabres P,Gigot N,Arbu

    更新日期:2012-11-02 00:00:00

  • Mapping of human methylmalonyl CoA mutase (MUT) locus on chromosome 6.

    abstract::Methylmalonyl CoA mutase (MCM) catalyzes an essential step in the degradation of several branch-chain amino acids and odd-chain fatty acids. Deficiency of this apoenzyme causes the mut form of methylmalonic acidemia, an often fatal disorder of organic acid metabolism. An MCM cDNA has recently been obtained from human ...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Ledley FD,Lumetta MR,Zoghbi HY,VanTuinen P,Ledbetter SA,Ledbetter DH

    更新日期:1988-06-01 00:00:00

  • Saturating the region of the polycystic kidney disease gene with NotI linking clones.

    abstract::A NotI-linking library was constructed from a radiation hybrid containing fragments of human chromosome 16. The clones were mapped on a panel of somatic cell hybrids, and 10 different NotI site-containing clones were localized close to and between genetic markers flanking the PKD1 locus. With pulsed-field gel analysis...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:

    authors: Himmelbauer H,Germino GG,Ceccherini I,Romeo G,Reeders ST,Frischauf AM

    更新日期:1991-02-01 00:00:00

  • Spinal muscular atrophy associated with progressive myoclonic epilepsy is caused by mutations in ASAH1.

    abstract::Spinal muscular atrophy (SMA) is a clinically and genetically heterogeneous disease characterized by the degeneration of lower motor neurons. The most frequent form is linked to mutations in SMN1. Childhood SMA associated with progressive myoclonic epilepsy (SMA-PME) has been reported as a rare autosomal-recessive con...

    journal_title:American journal of human genetics

    pub_type: 杂志文章

    doi:10.1016/j.ajhg.2012.05.001

    authors: Zhou J,Tawk M,Tiziano FD,Veillet J,Bayes M,Nolent F,Garcia V,Servidei S,Bertini E,Castro-Giner F,Renda Y,Carpentier S,Andrieu-Abadie N,Gut I,Levade T,Topaloglu H,Melki J

    更新日期:2012-07-13 00:00:00