Abstract:
:Pythium species are important soilborne pathogens occurring in the forest nursery industry of the Pacific Northwest. However, little is known about their genetic diversity or population structure and it is suspected that isolates are moved among forest nurseries on seedling stock and shared field equipment. In order to address these concerns, a total of 115 isolates of three Pythium species (P. irregulare, P. sylvaticum, and P. ultimum) were examined at three forest nurseries using simple sequence repeat (SSR) and amplified fragment length polymorphism (AFLP) markers. Analyses revealed distinct patterns of intraspecific variation for the three species. P. sylvaticum exhibited the most diversity, followed by P. irregulare, while substantial clonality was found in P. ultimum. For both P. irregulare and P. sylvaticum, but not P. ultimum, there was evidence for significant variation among nurseries. However, all three species also exhibited at least two distinct lineages not associated with the nursery of origin. Finally, evidence was found that certain lineages and clonal genotypes, including fungicide-resistant isolates, are shared among nurseries, indicating that pathogen movement has occurred.
journal_name
Phytopathologyjournal_title
Phytopathologyauthors
Weiland JE,Garrido P,Kamvar ZN,Espíndola AS,Marek SM,Grünwald NJ,Garzón CDdoi
10.1094/PHYTO-05-14-0147-Rsubject
Has Abstractpub_date
2015-05-01 00:00:00pages
684-94issue
5eissn
0031-949Xissn
1943-7684journal_volume
105pub_type
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