Abstract:
:Hi-C experiments study how genomes fold in 3D, generating contact maps containing features as small as 20 bp and as large as 200 Mb. Here we introduce Juicebox, a tool for exploring Hi-C and other contact map data. Juicebox allows users to zoom in and out of Hi-C maps interactively, just as a user of Google Earth might zoom in and out of a geographic map. Maps can be compared to one another, or to 1D tracks or 2D feature sets.
journal_name
Cell Systjournal_title
Cell systemsauthors
Durand NC,Robinson JT,Shamim MS,Machol I,Mesirov JP,Lander ES,Aiden ELdoi
10.1016/j.cels.2015.07.012subject
Has Abstractpub_date
2016-07-01 00:00:00pages
99-101issue
1eissn
2405-4712issn
2405-4720pii
S2405-4712(15)00054-Xjournal_volume
3pub_type
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