Beyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut Microbiota.

abstract：:Ripening cultures containing fungi and bacteria are widely used in smear-ripened cheese production processes, but little is known about the biotic interactions of typical ripening microorganisms at the surface of cheese. We developed a lab-scale mini-cheese model to investigate the biotic interactions of a synthetic c...

journal_title：Frontiers in microbiology

authors： Pham NP,Landaud S,Lieben P,Bonnarme P,Monnet C

更新日期：2019-08-16 00:00:00

abstract：:In Belize, shallow populations (10 and 16 m) of the coral species Montastraea cavernosa from the back reef and reef crest are genetically differentiated from deeper populations on the fore reef and reef wall (25 and 35 m). Like many species of scleractinian corals, M. cavernosa has an obligate symbiosis with dinoflage...

journal_title：Frontiers in microbiology

authors： Eckert RJ,Reaume AM,Sturm AB,Studivan MS,Voss JD

更新日期：2020-04-09 00:00:00

abstract：:Current notion presumes that only one protein is encoded at a given bacterial genetic locus. However, transcription and translation of an overlapping open reading frame (ORF) of 186 bp length were discovered by RNAseq and RIBOseq experiments. This ORF is almost completely embedded in the annotated L,D-transpeptidase g...

journal_title：Frontiers in microbiology

authors： Hücker SM,Vanderhaeghen S,Abellan-Schneyder I,Scherer S,Neuhaus K

更新日期：2018-05-14 00:00:00

abstract：:Bacillus amyloliquefaciens MEP218 is an autochthonous bacterial isolate with antibacterial and antifungal activities against a wide range of phytopathogenic microorganisms. Cyclic lipopeptides (CLP), particularly fengycins, produced by this bacterium; are the main antimicrobial compounds responsible for the growth inh...

journal_title：Frontiers in microbiology

authors： Medeot DB,Fernandez M,Morales GM,Jofré E

更新日期：2020-01-21 00:00:00

abstract：:Kunu is a traditional fermented single or mixed cereals-based beverage popularly consumed in many parts of West Africa. Presently, the bacterial community and mycotoxin contamination profiles during processing of various kunu formulations have never been comprehensively studied. This study, therefore, investigated the...

journal_title：Frontiers in microbiology

authors： Ezekiel CN,Ayeni KI,Ezeokoli OT,Sulyok M,van Wyk DAB,Oyedele OA,Akinyemi OM,Chibuzor-Onyema IE,Adeleke RA,Nwangburuka CC,Hajšlová J,Elliott CT,Krska R

更新日期：2019-01-09 00:00:00

abstract：:The mechanism of DNA replication is one of the driving forces of genome evolution. Bacterial DNA polymerase III, the primary complex of DNA replication, consists of PolC and DnaE. PolC is conserved in Gram-positive bacteria, especially in the Firmicutes with low GC content, whereas DnaE is widely conserved in most Gra...

journal_title：Frontiers in microbiology

authors： Akashi M,Yoshikawa H

更新日期：2013-09-17 00:00:00

abstract：:Microbiome research has increased dramatically in recent years, driven by advances in technology and significant reductions in the cost of analysis. Such research has unlocked a wealth of data, which has yielded tremendous insight into the nature of the microbial communities, including their interactions and effects, ...

journal_title：Frontiers in microbiology

authors： Cullen CM,Aneja KK,Beyhan S,Cho CE,Woloszynek S,Convertino M,McCoy SJ,Zhang Y,Anderson MZ,Alvarez-Ponce D,Smirnova E,Karstens L,Dorrestein PC,Li H,Sen Gupta A,Cheung K,Powers JG,Zhao Z,Rosen GL

更新日期：2020-02-19 00:00:00

abstract：:Biological stability of drinking water refers to the concept of providing consumers with drinking water of same microbial quality at the tap as produced at the water treatment facility. However, uncontrolled growth of bacteria can occur during distribution in water mains and premise plumbing, and can lead to hygienic ...

journal_title：Frontiers in microbiology

authors： Prest EI,Hammes F,van Loosdrecht MC,Vrouwenvelder JS

更新日期：2016-02-01 00:00:00

abstract：:Aerobic degradation of methylphosphonate (MPn) by marine bacterioplankton has been hypothesized to contribute significantly to the ocean's methane supersaturation, yet little is known about MPn utilization by marine microbes. To identify the microbial taxa and metabolic functions associated with MPn-driven methane pro...

journal_title：Frontiers in microbiology

authors： Martínez A,Ventouras LA,Wilson ST,Karl DM,Delong EF

更新日期：2013-11-26 00:00:00

abstract：:Inducer of meiosis 2 (Ime2), a protein kinase that has been identified in diverse fungal species, functions in the regulation of various cellular processes, such as ascospore formation, pseudohyphal growth, and sexual reproduction. In this study, AoIme2, an ortholog of Saccharomyces cerevisiae Ime2, was characterized ...

journal_title：Frontiers in microbiology

authors： Xie M,Bai N,Yang J,Jiang K,Zhou D,Zhao Y,Li D,Niu X,Zhang KQ,Yang J

更新日期：2020-01-14 00:00:00

abstract：:Due to the globally observed increase in antibiotic resistance of bacterial pathogens and the simultaneous decline in new antibiotic developments, the need for alternative inactivation approaches is growing. This is especially true for the treatment of infections with the problematic ESKAPE pathogens, which include En...

journal_title：Frontiers in microbiology

authors： Hoenes K,Bauer R,Meurle T,Spellerberg B,Hessling M

更新日期：2021-01-13 00:00:00

abstract：:Five sublacustrine thermal spring locations from 1 to 109 m water depth in Yellowstone Lake were surveyed by 16S ribosomal RNA gene sequencing in relation to their chemical composition and dark CO(2) fixation rates. They harbor distinct chemosynthetic bacterial communities, depending on temperature (16-110°C) and elec...

journal_title：Frontiers in microbiology

authors： Yang T,Lyons S,Aguilar C,Cuhel R,Teske A

更新日期：2011-06-13 00:00:00

abstract：:The fungus Colletotrichum gloeosporiodes infects plant hosts with a specialized cell called an appressorium, which is melanized and required for plant cell wall penetration. Here, we show that the mitogen-activated protein kinase CgMK1 governs appressorium formation and virulence in the poplar anthracnose fungus C. gl...

journal_title：Frontiers in microbiology

authors： He P,Wang Y,Wang X,Zhang X,Tian C

更新日期：2017-11-10 00:00:00

abstract：:Dodecyl protocatechuate (dodecyl) is a derivative of protocatechuic acid (3,4-dihydroxybenzoic acid) that possesses anti-oxidant and antifungal properties. Nanostructured lipid systems (NLS) can potentiate the action of many antifungal agents, reducing the required dose and side effects by improving their activity. Th...

journal_title：Frontiers in microbiology

authors： Medina-Alarcón KP,Singulani JL,Voltan AR,Sardi JCO,Petrônio MS,Santos MB,Polaquini CR,Regasini LO,Bolzani VS,da Silva DHS,Chorilli M,Mendes-Giannini MJS,Fusco-Almeida AM

更新日期：2017-06-12 00:00:00

abstract：:Pseudomonas aeruginosa (PA) is the leading cause of corneal blindness worldwide. A constant increase in multi-drug resistant PA strains have heightened the challenge of effectively managing corneal infections with conventional antibiotics. Antimicrobial peptides are promising antibiotic analogs with a unique mode of a...

journal_title：Frontiers in microbiology

authors： Mohammed I,Said DG,Nubile M,Mastropasqua L,Dua HS

更新日期：2019-09-19 00:00:00

abstract：:[This corrects the article DOI: 10.3389/fmicb.2019.02612.]. ...

journal_title：Frontiers in microbiology

authors： Treven P,Mahnič A,Rupnik M,Golob M,Pirš T,Matijašić BB,Lorbeg PM

更新日期：2020-01-29 00:00:00

abstract：:For tolerating extreme desiccation, cyanobacteria are known to produce both compatible solutes at intracellular level and a copious amount of exopolysaccharides as a protective coat. However, these molecules make cyanobacterial cells refractory to a broad spectrum of cell disruption methods, hindering genome sequencin...

journal_title：Frontiers in microbiology

authors： Urrejola C,Alcorta J,Salas L,Vásquez M,Polz MF,Vicuña R,Díez B

更新日期：2019-05-07 00:00:00

abstract：:Variation among animals in their host-associated microbial communities is increasingly recognized as a key determinant of important life history traits including growth, metabolism, and resistance to disease. Quantitative estimates of the factors shaping the stability of host microbiomes over time at the individual le...

journal_title：Frontiers in microbiology

authors： Harrison XA,Price SJ,Hopkins K,Leung WTM,Sergeant C,Garner TWJ

更新日期：2019-12-20 00:00:00

abstract：:The eastern China marginal seas (ECMS) are prominent examples of river-dominated ocean margins, whose most characteristic feature is the existence of isolated mud patches on sandy sediments. Ammonia-oxidizing prokaryotes play a crucial role in the nitrogen cycles of many marine environments, including marginal seas. H...

journal_title：Frontiers in microbiology

authors： Yu S,Yao P,Liu J,Zhao B,Zhang G,Zhao M,Yu Z,Zhang XH

更新日期：2016-02-12 00:00:00

abstract：:The development of a safe and efficient multivalent vaccine has great prospects for application. Both rabies virus (RABV) and canine distemper virus (CDV) are highly infectious antigens, causing lethal diseases in domestic dogs and other carnivores worldwide. In this study, a replication-deficient human adenovirus 5 (...

journal_title：Frontiers in microbiology

authors： Yan L,Zhao Z,Xue X,Zheng W,Xu T,Liu L,Tian L,Wang X,He H,Zheng X

更新日期：2020-06-16 00:00:00

abstract：:Bifidobacteria colonize the gut of various mammals, including humans, where they may metabolize complex, diet-, and host-derived carbohydrates. The glycan-associated metabolic features encoded by bifidobacteria are believed to be strongly influenced by cross-feeding activities due to the co-existence of strains with d...

journal_title：Frontiers in microbiology

authors： Turroni F,Özcan E,Milani C,Mancabelli L,Viappiani A,van Sinderen D,Sela DA,Ventura M

更新日期：2015-09-24 00:00:00

abstract：:Bacillus cereus is a Gram-positive endospore forming bacterium known for its wide spectrum of phenotypic traits, enabling it to occupy diverse ecological niches. Although the population structure of B. cereus is highly dynamic and rather panmictic, production of the emetic B. cereus toxin cereulide is restricted to st...

journal_title：Frontiers in microbiology

authors： Ehling-Schulz M,Frenzel E,Gohar M

更新日期：2015-07-14 00:00:00

abstract：:RNA interference (RNAi) is a key regulatory pathway of gene expression in almost all eukaryotes. This mechanism relies on short non-coding RNA molecules (sRNAs) to recognize in a sequence-specific manner DNA or RNA targets leading to transcriptional or post-transcriptional gene silencing. To date, the fundamental role...

journal_title：Frontiers in microbiology

authors： Silvestri A,Turina M,Fiorilli V,Miozzi L,Venice F,Bonfante P,Lanfranco L

更新日期：2020-03-13 00:00:00

abstract：:The production of pneumocandin B0 is limited by feedback inhibition. Here, low-temperature adaptive laboratory evolution (ALE) was used to improve the production capacity of Glarea lozoyensis by enhancing its membrane permeability. After 50 cycles of ALE, the pneumocandin B0 production of the endpoint strain (ALE50) r...

journal_title：Frontiers in microbiology

authors： Song P,Zhang K,Zhang S,Huang BQ,Ji XJ,Ren LJ,Gao S,Wen JP,Huang H

更新日期：2018-11-21 00:00:00

abstract：:Anti-retroviral therapy (ART) is crucial for controlling human immunodeficiency virus type-1 (HIV-1) infection. Recently, progress in identifying and characterizing highly potent broadly neutralizing antibodies has provided valuable templates for HIV-1 therapy and vaccine design. Nevertheless, HIV-1, like many RNA vir...

journal_title：Frontiers in microbiology

authors： Harada S,Yoshimura K

更新日期：2017-03-16 00:00:00

abstract：:This study aimed to investigate antimicrobial resistance and molecular epidemiology of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli (E. coli) isolated from outpatients in town hospitals of Shandong province, China. Antimicrobial susceptibility of ESBL-producing E. coli was tested using the disk diff...

journal_title：Frontiers in microbiology

authors： Miao Z,Li S,Wang L,Song W,Zhou Y

更新日期：2017-01-24 00:00:00

abstract：:Emerging evidence suggests that antibodies against merozoite proteins involved in Plasmodium falciparum invasion into the red blood cell (RBC) play an important role in clinical immunity to malaria. The protein family of parasite antigens known as P. falciparum reticulocyte binding protein-like homolog (PfRh) is requi...

journal_title：Frontiers in microbiology

authors： Chiu CY,Healer J,Thompson JK,Chen L,Kaul A,Savergave L,Raghuwanshi A,Li Wai Suen CS,Siba PM,Schofield L,Mueller I,Cowman AF,Hansen DS

更新日期：2014-06-30 00:00:00

abstract：:To understand the contribution of animal- and human-derived fecal pollution sources in shaping integron prevalence and diversity in beach waters, 414 Escherichia coli strains were collected from beach waters (BW, n = 166), seagull feces (SF, n = 179), and wastewaters (WW, n = 69), on the World Biosphere Reserve of the...

journal_title：Frontiers in microbiology

authors： Moura A,Araújo S,Alves MS,Henriques I,Pereira A,Correia AC

更新日期：2014-08-12 00:00:00

abstract：:While there are many opinions on what mathematical modeling in biology is, in essence, modeling is a mathematical tool, like a microscope, which allows consequences to logically follow from a set of assumptions. Only when this tool is applied appropriately, as microscope is used to look at small items, it may allow to...

journal_title：Frontiers in microbiology

authors： Ganusov VV

更新日期：2016-07-22 00:00:00

abstract：:Beta-lactam antibiotics are an important class of antibiotics for treating bacterial infections. Despite prevalent β-lactam resistance in Campylobacter jejuni, the leading bacterial cause of human diarrhea in developed countries, molecular mechanism of β-lactam resistance in C. jejuni is still largely unknown. In this...

journal_title：Frontiers in microbiology

authors： Zeng X,Gillespie B,Lin J

更新日期：2015-11-17 00:00:00