Microbial Eukaryote Diversity and Activity in the Water Column of the South China Sea Based on DNA and RNA High Throughput Sequencing.

abstract：:The mitochondrial genome of the Paracoccidioides brasiliensis reference isolate Pb18 was first sequenced and described by Cardoso et al. (2007), as a circular genome with a size of 71.3 kb and containing 14 protein coding genes, 25 tRNAs, and the large and small subunits of ribosomal RNA. Later in 2011, Desjardins et ...

journal_title：Frontiers in microbiology

authors： Misas E,Gómez OM,Botero V,Muñoz JF,Teixeira MM,Gallo JE,Clay OK,McEwen JG

更新日期：2020-08-04 00:00:00

abstract：:Parasites are key drivers of phytoplankton bloom dynamics and related aquatic ecosystem processes. Yet, the dearth of morphological and molecular information hinders the assessment of their diversity and ecological role. Using single-cell techniques, we characterise morphologically and molecularly, intracellular paras...

journal_title：Frontiers in microbiology

authors： Garvetto A,Nézan E,Badis Y,Bilien G,Arce P,Bresnan E,Gachon CMM,Siano R

更新日期：2018-12-03 00:00:00

abstract：:During cystic fibrosis (CF) chronic lung infections, bacteria of the Burkholderia cepacia complex (Bcc) are exposed for several years to a stressful and changing environment. These environmental challenges results in genetic changes of the initial infecting strain with the consequent diversification of genotypes and p...

journal_title：Frontiers in microbiology

authors： Moreira AS,Lourenço AB,Sá-Correia I

更新日期：2016-12-20 00:00:00

abstract：:Whole-genome sequencing (WGS) is the method of choice for bacterial subtyping and it is rapidly replacing the more traditional methods such as pulsed-field gel electrophoresis (PFGE). Here we used the high-resolution core genome single nucleotide variant (cgSNV) typing method to characterize clinical and food from Sal...

journal_title：Frontiers in microbiology

authors： Yousfi K,Usongo V,Berry C,Khan RH,Tremblay DM,Moineau S,Mulvey MR,Doualla-Bell F,Fournier E,Nadon C,Goodridge L,Bekal S

更新日期：2020-06-17 00:00:00

abstract：:A Burkholderia cenocepacia infection usually leads to reduced survival and fatal cepacia syndrome in cystic fibrosis patients. The identification of B. cenocepacia essential genes for in vivo survival is key to designing new anti-infectives therapies. We used the Transposon-Directed Insertion Sequencing (TraDIS) appro...

journal_title：Frontiers in microbiology

authors： Wong YC,Abd El Ghany M,Ghazzali RNM,Yap SJ,Hoh CC,Pain A,Nathan S

更新日期：2018-05-29 00:00:00

abstract：:Our perspective on nature has changed throughout history and at the same time has affected directly or indirectly our perception of biological processes. In that sense, the "fluxus" of information in a viral population arises a result of a much more complex process than the encoding of a protein by a gene, but as the ...

journal_title：Frontiers in microbiology

authors： Scolaro LA,Roldan JS,Theaux C,Damonte EB,Carlucci MJ

更新日期：2017-12-22 00:00:00

abstract：:Cathelicidins (CATHs) are host defense peptides (HDPs) that play an important role in the innate immune response against infections. Although multiple functions of cathelicidins have been described, including direct antimicrobial activity and several immunomodulatory effects on the host, relatively little is known abo...

journal_title：Frontiers in microbiology

authors： Peng L,Du W,Balhuizen MD,Haagsman HP,de Haan CAM,Veldhuizen EJA

更新日期：2020-03-19 00:00:00

abstract：:As the highest place of the world, the Tibetan plateau is a fragile ecosystem. Given the importance of microbial communities in driving soil nutrient cycling, it is of interest to document the microbial biogeographic pattern here. We adopted a microarray-based tool named GeoChip 4.0 to investigate grassland microbial ...

journal_title：Frontiers in microbiology

authors： Qi Q,Zhao M,Wang S,Ma X,Wang Y,Gao Y,Lin Q,Li X,Gu B,Li G,Zhou J,Yang Y

更新日期：2017-06-13 00:00:00

abstract：:Generally, plants are not considered as hosts for human and animal pathogens (HAP). The recent produce-associated outbreaks of food-borne diseases have drawn attention toward significant deficiencies in our understanding of the ecology of HAP, and their potential for interkingdom transfer. To examine the association o...

journal_title：Frontiers in microbiology

authors： Yousaf S,Bulgari D,Bergna A,Pancher M,Quaglino F,Casati P,Campisano A

更新日期：2014-07-08 00:00:00

abstract：:Objective: To elucidate whether the genetic platforms of blaCTX-M contribute to the phenotypes of multi-drug-resistance (MDR) in the first carbapenemase-producing K. pneumoniae strains isolated in Chile. Method: Twenty-two carbapenemase-producing K. pneumoniae strains isolated from different Chilean patients and hospi...

journal_title：Frontiers in microbiology

authors： Carrasco-Anabalón S,Vera-Leiva A,Quezada-Aguiluz M,Morales-Rivera MF,Lima CA,Fernández J,Ulloa S,Domínguez M,González-Rocha G,Bello-Toledo H

更新日期：2018-03-06 00:00:00

abstract：:Disease causing Escherichia coli commonly found in meat and poultry include intestinal pathogenic E. coli (iPEC) as well as extraintestinal types such as the Uropathogenic E. coli (UPEC). In this study we compared the resistance of iPEC (O157:H7) to UPEC in chicken meat using High Pressure Processing (HPP) in with (th...

journal_title：Frontiers in microbiology

authors： Chien SY,Sheen S,Sommers CH,Sheen LY

更新日期：2016-06-14 00:00:00

abstract：:Previously, we determined that diallyl disulfide (DADS) from garlic oil can inhibit Pseudomonas aeruginosa PAO1 pathogenic factors by inactivating the transcription of key genes from three quorum sensing (QS) systems (las, rhl, and pqs) based on the effects of DADS on growth, virulence factor production (elastase, pyo...

journal_title：Frontiers in microbiology

authors： Li WR,Ma YK,Xie XB,Shi QS,Wen X,Sun TL,Peng H

更新日期：2019-01-07 00:00:00

abstract：:The Prodiginine family consists of primarily red-pigmented tripyrrole secondary metabolites that were first characterized in the Gram-negative bacterial species Serratia marcescens and demonstrates a wide array of biological activities and applications. Derivatives of prodiginine have since been characterized in the m...

journal_title：Frontiers in microbiology

authors： Sakai-Kawada FE,Ip CG,Hagiwara KA,Awaya JD

更新日期：2019-07-24 00:00:00

abstract：:A number of studies have shown that elevated atmospheric CO2 ([CO2]) affects rice yields and grain quality. However, the responses of root-associated bacteria to [CO2] elevation have not been characterized in a large-scale field study. We conducted a free-air CO2 enrichment (FACE) experiment (ambient + 200 μmol.mol(-1...

journal_title：Frontiers in microbiology

authors： Okubo T,Liu D,Tsurumaru H,Ikeda S,Asakawa S,Tokida T,Tago K,Hayatsu M,Aoki N,Ishimaru K,Ujiie K,Usui Y,Nakamura H,Sakai H,Hayashi K,Hasegawa T,Minamisawa K

更新日期：2015-02-20 00:00:00

abstract：:As Cryptococcus neoformans mother cells generationally age, their cell walls become thicker and cell-wall associated virulence factors are upregulated. Antiphagocytic protein 1 (App1), and laccase enzymes (Lac1 and Lac2) are virulence factors known to contribute to virulence of C. neoformans during infection through i...

journal_title：Frontiers in microbiology

authors： Orner EP,Bhattacharya S,Kalenja K,Hayden D,Del Poeta M,Fries BC

更新日期：2019-11-07 00:00:00

abstract：:Merkel cell polyomavirus (MCV) plays a causal role in ∼80% of Merkel cell carcinomas (MCC). MCV is clonally integrated into the MCC tumor genome, which results in persistent expression of large T (LT) and small T (sT) antigen oncoproteins encoded by the early locus. In MCV-positive MCC tumors, LT is truncated by prema...

journal_title：Frontiers in microbiology

authors： Velásquez C,Amako Y,Harold A,Toptan T,Chang Y,Shuda M

更新日期：2018-04-11 00:00:00

abstract：:Fungi play a critical role in the degradation of organic matter. Because different combinations of fungi result in different rates of decomposition, determining how climate change will affect microbial composition and function is fundamental to predicting future environments. Fungal response to global change is patter...

journal_title：Frontiers in microbiology

authors： Amend AS,Matulich KL,Martiny JB

更新日期：2015-02-18 00:00:00

abstract：:Tuberculosis (TB) recurrence can result from either relapse of an original infection or exogenous reinfection with a new strain of Mycobacterium tuberculosis (MTB). The aim of this study was to assess the roles of relapse and reinfection among recurrent TB cases characterized by a high prevalence rate of drug-resistan...

journal_title：Frontiers in microbiology

authors： Zong Z,Huo F,Shi J,Jing W,Ma Y,Liang Q,Jiang G,Dai G,Huang H,Pang Y

更新日期：2018-08-14 00:00:00

abstract：:Sterile attenuation of Plasmodium parasites at the liver-stage either by irradiation or genetic modification, or at the blood-stage by chemoprophylaxis, has been shown to induce immune responses that can protect against subsequent wild-type infection. However, following certain interventions, parasite attenuation can ...

journal_title：Frontiers in microbiology

authors： Fernandes P,Frank R,Lewis MD,Mueller AK

更新日期：2014-12-02 00:00:00

abstract：:Innovations in next-generation sequencing technology have introduced new avenues in microbial studies through "omics" approaches. This technology has considerably augmented the knowledge of the microbial world without isolation prior to their identification. With an enormous volume of bacterial "omics" data, considera...

journal_title：Frontiers in microbiology

authors： Parmar KM,Gaikwad SL,Dhakephalkar PK,Kothari R,Singh RP

更新日期：2017-04-07 00:00:00

abstract：:The hexameric MCM complex is the catalytic core of the replicative helicase in eukaryotic and archaeal cells. Here we describe the first in vivo analysis of archaeal MCM protein structure and function relationships using the genetically tractable haloarchaeon Haloferax volcanii as a model system. Hfx. volcanii encodes...

journal_title：Frontiers in microbiology

authors： Kristensen TP,Maria Cherian R,Gray FC,MacNeill SA

更新日期：2014-03-26 00:00:00

abstract：:Antibiotic resistance is a problem for human health, and consequently, its study had been traditionally focused toward its impact for the success of treating human infections in individual patients (individual health). Nevertheless, antibiotic-resistant bacteria and antibiotic resistance genes are not confined only to...

journal_title：Frontiers in microbiology

authors： Hernando-Amado S,Coque TM,Baquero F,Martínez JL

更新日期：2020-08-28 00:00:00

abstract：:The objective of this study was to evaluate the effects of wilting and Lactobacillus plantarum (LP) addition on the silage fermentation quality and microbial community of Moringa oleifera Lam. leaf silage. Unwilted (direct-cut) or wilted M. oleifera leaves were prepared either with or without LP (1.0 × 106 cfu/g) foll...

journal_title：Frontiers in microbiology

authors： Wang Y,Wang C,Zhou W,Yang FY,Chen XY,Zhang Q

更新日期：2018-08-06 00:00:00

abstract：:The environment of Lake Baikal is a well-known source of microbial diversity. The strain Streptomyces sp. IB2014/011-12, isolated from samples collected at Lake Baikal, was found to exhibit potent activity against Gram-positive bacteria. Here, we report isolation and characterization of linear polyketide alpiniamide A...

journal_title：Frontiers in microbiology

authors： Paulus C,Rebets Y,Zapp J,Rückert C,Kalinowski J,Luzhetskyy A

更新日期：2018-08-22 00:00:00

abstract：:Models are important tools in microbial ecology. They can be used to advance understanding by helping to interpret observations and test hypotheses, and to predict the effects of ecosystem management actions or a different climate. Over the past decades, biological knowledge and ecosystem observations have advanced to...

journal_title：Frontiers in microbiology

authors： Kreft JU,Plugge CM,Prats C,Leveau JHJ,Zhang W,Hellweger FL

更新日期：2017-11-27 00:00:00

abstract：:A Gram-positive, coccoid, motile, aerobic bacterium, designated strain B12T was isolated from a Jet Propulsion Laboratory spacecraft assembly cleanroom, Pasadena, CA, United States. Strain B12T was resistant to chloramphenicol (100 μg/mL), and is a relatively slow grower (3-5 days optimal). Strain B12T was found to gr...

journal_title：Frontiers in microbiology

authors： Mhatre S,Singh NK,Wood JM,Parker CW,Pukall R,Verbarg S,Tindall BJ,Neumann-Schaal M,Venkateswaran K

更新日期：2020-08-18 00:00:00

abstract：:The gene pair hgcAB is essential for microbial mercury methylation. Our understanding of its abundance and diversity in nature is rapidly evolving. In this study we developed a new broad-range primer set for hgcAB, plus an expanded hgcAB reference library, and used these to characterize Hg-methylating communities from...

journal_title：Frontiers in microbiology

authors： Gionfriddo CM,Wymore AM,Jones DS,Wilpiszeski RL,Lynes MM,Christensen GA,Soren A,Gilmour CC,Podar M,Elias DA

更新日期：2020-10-06 00:00:00

abstract：:Kaposi's sarcoma-associated herpesvirus (KSHV), also called human herpesvirus 8, belongs to the gamma herpesviruses and is the etiological agent of Kaposi's sarcoma, primary effusion lymphoma, and some types of multicentric Castleman's disease. In vivo, KSHV mainly infects B cells and endothelial cells. The interactio...

journal_title：Frontiers in microbiology

authors： Liang D,Lin X,Lan K

更新日期：2012-01-11 00:00:00

abstract：:DsrAB-type dissimilatory sulfite reductase is a key enzyme of microbial sulfur-dependent energy metabolism. Sulfur oxidizers also contain DsrL, which is essential for sulfur oxidation in Allochromatium vinosum. This NAD(P)H oxidoreductase acts as physiological partner of oxidative-type rDsrAB. Recent analyses uncovere...

journal_title：Frontiers in microbiology

authors： Löffler M,Wallerang KB,Venceslau SS,Pereira IAC,Dahl C

更新日期：2020-10-16 00:00:00

abstract：:Acinetobacter baumannii often causes serious nosocomial infections. Because of its serious drug resistance problems, complex drug resistance mechanism, and rapid adaptation to antibiotics, it often shows pan-drug resistance and high fatality rates, which represent great challenges for clinical treatment. Therefore, id...

journal_title：Frontiers in microbiology

authors： Huang W,Zhang Q,Li W,Chen Y,Shu C,Li Q,Zhou J,Ye C,Bai H,Sun W,Yang X,Ma Y

更新日期：2019-06-18 00:00:00