Abstract:
:Elucidation of plant dynamics under fluctuating natural environments is a challenging goal in plant physiology. Recently, using a computer statistics integrating a series of transcriptome data of field-grown rice leaves during an entire crop season and several corresponding environmental data such as solar radiation and ambient temperature, most parts of transcriptome have been modeled. This reveals the detailed contributions of developmental timing, circadian clocks and each environmental factor to transcriptome dynamics in the field and can predict transcriptome dynamics under given environments. Furthermore, some traits such as flowering time in natural environments have been shown to be predicted by mathematical models based on gene-networks parameterized with data obtained in the laboratory, and phenology models refined by knowledge of molecular genetics. New molecular physiology is beginning in plant science.
journal_name
Curr Opin Plant Bioljournal_title
Current opinion in plant biologyauthors
Izawa Tdoi
10.1016/j.pbi.2015.02.003subject
Has Abstractpub_date
2015-04-01 00:00:00pages
87-92eissn
1369-5266issn
1879-0356pii
S1369-5266(15)00023-0journal_volume
24pub_type
杂志文章,评审abstract::Plant cell development and growth are determined by the expansion pattern of the cell wall, a matrix of mixed polysaccharide polymers and proteins. To understand the different roles of these polymers in the regulation of the morphogenetic process, their spatial dynamics need to be monitored over time. Recent developme...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2014.11.007
更新日期:2015-02-01 00:00:00
abstract::Innate defense in wild plant populations is an invaluable resource for understanding how sustainable disease control can be achieved in crops through research that is rooted in molecular and evolutionary biology. Much progress has been made from molecular research into pathogen detection and defense induction. Bacteri...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.05.011
更新日期:2006-08-01 00:00:00
abstract::Research on effectors secreted by pathogens during host attack has dominated the field of molecular plant-microbe interactions over recent years. Functional analysis of type III secreted effectors injected by pathogenic bacteria into host cells has significantly advanced the field and demonstrated that many function t...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.03.005
更新日期:2011-08-01 00:00:00
abstract::Although concerted efforts to understand selected botanical models have been made, the resulting basic knowledge varies in its applicability to other diverse species including the major crops. Recent advances in high-throughput genomics are offering new avenues through which to exploit model systems for the study of b...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(02)00246-7
更新日期:2002-04-01 00:00:00
abstract::Plant-infecting viruses cause significant crop losses around the world and the majority of emerging threats to crop production have a viral etiology. Significant progress has been made and continues to be made in understanding how viruses induce disease and overcome some forms of resistance-particularly resistance bas...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2013.06.004
更新日期:2013-08-01 00:00:00
abstract::Recent studies have further confirmed the ubiquity of cell wall restructuring during plant growth and development, and have emphasized the fact that our understanding of the breadth of molecular processes that mediate wall modification is still rudimentary. In the past few years, both enzymatic and non-enzymatic agent...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2004.03.013
更新日期:2004-06-01 00:00:00
abstract::Plant diseases threaten global food security and biodiversity. Rapid dispersal of pathogens particularly via human means has accelerated in recent years. Timely detection of plant pathogens is essential to limit their spread. At the same time, international regulations must keep abreast of advances in plant disease di...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2020.04.011
更新日期:2020-08-01 00:00:00
abstract::Double fertilization in flowering seed plants requires intercellular signaling events between many interacting partners. The four cell types of the seven-celled female gametophyte communicate with each other to establish and maintain their identity. They secrete signaling molecules to guide the male gametophyte and to...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2005.11.002
更新日期:2006-02-01 00:00:00
abstract::Cytokinins are a class of phytohormones that regulate a wide variety of physiological and developmental processes such as shoot and root growth. Cytokinin signaling relies on a phosphorelay mechanism similar to the prokaryotic two-component system. Although the principal components mediating this cascade have been ide...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2009.09.018
更新日期:2010-02-01 00:00:00
abstract::In plants, a host's responses to an attempted infection include activation of various secondary metabolite pathways, some of which are specific for particular plant phylogenetic clades. Phytochemicals that represent respective end products in plant immunity have been stereotypically linked to antimicrobial properties....
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2012.03.002
更新日期:2012-08-01 00:00:00
abstract::Fibrous proteins from spiders, proteins with synthetic multiple repeats and mammalian structural proteins such as collagen have been produced in transgenic plants. Recent advances in the production of biodegradable plastic in plants also show the potential of molecular farming for research into and production of mater...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2005.01.010
更新日期:2005-04-01 00:00:00
abstract::During the past decade, molecular genetic studies on the reference plant Arabidopsis have established a largely linear signal transduction pathway for the response to ethylene gas. The biochemical modes of action of many of the signaling components are still unresolved. During the past year, however, progress in sever...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2003.11.011
更新日期:2004-02-01 00:00:00
abstract::Nitrogen (N) is an essential element for plants that is available in agricultural soils mainly as macronutrients in the form of nitrate and ammonium. Interplay between high-affinity and low-affinity transporters ensures efficient uptake from the soil even under highly fluctuating N availability. After uptake, N assimi...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.05.010
更新日期:2015-06-01 00:00:00
abstract::SUMOylation is an essential post-translational modification that affects several cellular processes, from gene replication to stress response. Studies using the SUMO (de)conjugation machinery have provided evidence regarding its potential to improve crop performance and productivity under normal and adverse conditions...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2019.04.009
更新日期:2019-06-01 00:00:00
abstract::The plant cell wall provides form and integrity to the cell as well as a dynamic interface between a cell and its environment. Therefore mechanisms capable of policing changes in the cell wall, signaling cellular responses including those that would feedback regulate cell wall properties are expected to play important...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.09.001
更新日期:2011-12-01 00:00:00
abstract::Significant advances in the genetic dissection of brassinosteroid biosynthesis and signaling have been made during the past few years. Genetic and biochemical data have helped to elucidate the pathways of biosynthesis of brassinolide, the most active brassinosteroid. In addition, several models have been put forward f...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(99)00038-2
更新日期:2000-02-01 00:00:00
abstract::Virulence factors are molecules that enable plant pathogens to infect and colonize host tissues successfully. These molecules co-evolve with host genes to ensure functionality and to avoid recognition by the host immune system. Some pathogens also produce the plant growth hormone cytokinin (CK) and other plant hormone...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2018.03.002
更新日期:2018-08-01 00:00:00
abstract::Polyploidy, or whole genome duplication, is recognized as an important feature of eukaryotic genome evolution. Among eukaryotes, polyploidy has probably had the largest evolutionary impact on vascular plants where many contemporary species are of recent polyploid origin. Genomic analyses have uncovered evidence of at ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2012.03.010
更新日期:2012-04-01 00:00:00
abstract::Fertilization is an important life event for sexually reproductive plants. Part of this process involves precise regulation of a series of complicated cell-cell communications between male and female tissues. Through genetic and omics approaches, many genes and proteins involved in this process have been identified. H...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.10.006
更新日期:2015-12-01 00:00:00
abstract::Primary metabolism in plants is tightly regulated by environmental factors such as light and nutrient availability at multiple levels. The circadian clock is a self-sustained endogenous oscillator that enables organisms to predict daily and seasonal changes. The regulation of primary metabolism by the circadian clock ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2012.01.013
更新日期:2012-06-01 00:00:00
abstract::Aquaporins are channel proteins that facilitate the transport of water and small neutral molecules, including gases, across cell membranes of most of the living organisms. Integrative studies have stressed the role of aquaporins in maintaining the whole plant water and nutrient status. Cellular aspects of plant aquapo...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2009.09.002
更新日期:2009-12-01 00:00:00
abstract::Changes in gene expression during systemic acquired resistance (SAR) require the phenolic signaling molecule salicylic acid (SA) and are modulated by the interaction between the NON EXPRESSOR OF PATHOGENESIS-RELATED GENES1 (NPR1) protein and members of the TGA family of transcription factors. In the past two years, th...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2005.05.003
更新日期:2005-08-01 00:00:00
abstract::Chlamydomonas has traditionally been exploited as an organism that is associated with sophisticated physiological, genetic and molecular analyses, all of which have been used to elucidate several biological processes, especially photosynthesis and flagella function and assembly. Recently, the genomics of Chlamydomonas...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.01.012
更新日期:2007-04-01 00:00:00
abstract::The basic mechanism of mitosis is universally conserved in all eucaryotes, but specific solutions to achieve this process have been adapted by different organisms during evolution. Although cytological studies of plant cells have contributed to our understanding of chromatin dynamics during mitosis, many of the molecu...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(02)00297-2
更新日期:2002-12-01 00:00:00
abstract::Recent research indicates that several sulfate transporters - exhibiting different tissue specificities and modes of expression - may play distinct roles in sulfate uptake within specific tissues and in long-distance sulfate translocation. The transcription levels of particular genes and feedback inhibition of serine ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:
更新日期:2000-06-01 00:00:00
abstract::Although next-generation sequencing (NGS) technology has enabled the decoding of many crop species genomes, most of the underlying genetic components for economically important crop traits remain to be determined. Network approaches have proven useful for the study of the reference plant, Arabidopsis thaliana, and the...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.02.001
更新日期:2015-04-01 00:00:00
abstract::Medicago truncatula will be among the first plant species to benefit from the completion of a whole-genome sequencing project. For each of these species, Arabidopsis, rice and now poplar and Medicago, annotation, the process of identifying gene structures and defining their functions, is essential for the research com...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.01.004
更新日期:2006-04-01 00:00:00
abstract::Plants must adapt to drought stress to survive. The phytohormone abscisic acid (ABA) is produced under drought stress conditions and is essential for the response to drought stress. The ABA level plays an important role in the response, and several enzymes for ABA biosynthesis and catabolism have been identified. Phys...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.04.014
更新日期:2007-06-01 00:00:00
abstract::Because of their prominent roles in plant development, transcription factors (TF) play central roles as drivers of innovation in the evolution of the green lineage (viridiplantae). The advent of massive sequencing combined with comparative genetics/genomics allows a rigorous investigation of how TF families have contr...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2020.03.002
更新日期:2020-04-01 00:00:00
abstract::Protein farnesylation has an important role in the regulation of plant development and signal transduction, but the exact function of this modification is not well understood. The identification of protein farnesyltransferase substrates, together with the genetic analysis of mutants that are deficient in protein farne...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2003.09.005
更新日期:2003-12-01 00:00:00