Multistage approach for clustering and classification of ECG data.

Abstract:

:Accurate and fast approaches for automatic ECG data classification are vital for clinical diagnosis of heart disease. To this end, we propose a novel multistage algorithm that combines various procedures for dimensionality reduction, consensus clustering of randomized samples and fast supervised classification algorithms for processing of the highly dimensional large ECG datasets. We carried out extensive experiments to study the effectiveness of the proposed multistage clustering and classification scheme using precision, recall and F-measure metrics. We evaluated the performance of numerous combinations of various methods for dimensionality reduction, consensus functions and classification algorithms incorporated in our multistage scheme. The results of the experiments demonstrate that the highest precision, recall and F-measure are achieved by the combination of the rank correlation coefficient for dimensionality reduction, HBGF consensus function and the SMO classifier with the polynomial kernel.

authors

Abawajy JH,Kelarev AV,Chowdhury M

doi

10.1016/j.cmpb.2013.08.002

subject

Has Abstract

pub_date

2013-12-01 00:00:00

pages

720-30

issue

3

eissn

0169-2607

issn

1872-7565

pii

S0169-2607(13)00267-8

journal_volume

112

pub_type

杂志文章
  • Inspiratory respiratory mechanics estimation by using expiratory data for reverse-triggered breathing cycles.

    abstract:BACKGROUND AND OBJECTIVE:Model-based lung mechanics monitoring can provide clinically useful information for guiding mechanical ventilator treatment in intensive care. However, many methods of measuring lung mechanics are not appropriate for both fully and partially sedated patients, and are unable provide lung mechani...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2019.105184

    authors: Howe SL,Chase JG,Redmond DP,Morton SE,Kim KT,Pretty C,Shaw GM,Tawhai MH,Desaive T

    更新日期:2020-04-01 00:00:00

  • A new hybrid intelligent system for accurate detection of Parkinson's disease.

    abstract::Elderly people are commonly affected by Parkinson's disease (PD) which is one of the most common neurodegenerative disorders due to the loss of dopamine-producing brain cells. People with PD's (PWP) may have difficulty in walking, talking or completing other simple tasks. Variety of medications is available to treat P...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2014.01.004

    authors: Hariharan M,Polat K,Sindhu R

    更新日期:2014-03-01 00:00:00

  • PC software library for the production of auditory stimuli in cognitive event-related potential experiments.

    abstract::Software which provides an interface to the features of the Sound Blaster Pro card for the IBM PC using MS-DOS is described. The library may be called from a Turbo Pascal version 6 program. It permits tones of specified frequency (500 Hz-8 kHz in increments of 500Hz) and aversive noise to be turned on and off by a con...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(94)01588-7

    authors: McCullagh PJ,McAllister HG,Armstrong GA,Regan MF

    更新日期:1994-12-01 00:00:00

  • An alternative method for electrophoretic gel image analysis in the GelMaster software.

    abstract::A novel methodology of electrophoretic gel image analysis has been proposed that is based on two-dimensional image processing methods instead of previously used one-dimensional Gaussian deconvolution. The crucial problem of the analysis of imperfect gels, that consists in band detection, is solved using the algorithms...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2004.09.007

    authors: Bajla I,Holländer I,Fluch S,Burg K,Kollár M

    更新日期:2005-03-01 00:00:00

  • Control system design of a 3-DOF upper limbs rehabilitation robot.

    abstract::This paper presents the control system design of a rehabilitation and training robot for the upper limbs. Based on a hierarchical structure, this control system allows the execution of sequence of switching control laws (position, force, impedance and force/impedance) corresponding to the required training configurati...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2007.07.006

    authors: Denève A,Moughamir S,Afilal L,Zaytoon J

    更新日期:2008-02-01 00:00:00

  • Intuitive user interfaces (IUI): a CASE starting point for design and programming.

    abstract::The acceptance of a software product depends to a considerable extent on the user interface. The class of graphic-oriented user interfaces that are called Intuitive User Interfaces (IUI) is described. These interfaces allow the user to learn to operate software programs quickly. In the following the graphical layout p...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(92)90087-n

    authors: Bödi RA,Kaulich TW

    更新日期:1992-03-01 00:00:00

  • Construction of the flow rate nomogram using polynomial regression.

    abstract::The urinary flow rates of normal individuals depend on the initial bladder volume in a non-linear fashion (J. Urol. 109 (1973) 874). A flow rate nomogram was developed by Siroky, Olsson and Krane, (J. Vol. 122 (1979) 665), taking the non-linear relationship into account, as an aid in the interpretation of urinary flow...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(93)90030-o

    authors: Hosmane B,Maurath C,McConnell M

    更新日期:1993-04-01 00:00:00

  • Assessing drug effect from distributional data: A population approach with application to Duchenne Muscular Dystrophy treatment.

    abstract:BACKGROUND AND OBJECTIVE:In Duchenne Muscular Dystrophy (DMD) treatment, muscle fiber size can be considered as an indicator of muscle health and function. In particular, the statistical distribution of fibers cross-sectional areas (CSAs) has been used as quantitative efficacy endpoint. For each patient, assessment of ...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2019.06.002

    authors: Lavezzi SM,Rocchetti M,Bettica P,Petrini S,De Nicolao G

    更新日期:2019-09-01 00:00:00

  • Computerized diagnosis of gastrointestinal helminths of humans.

    abstract::An interactive computer program written in BASIC with the objective of assisting the identification of species of common gastrointestinal parasites of humans is presented. The computer program acquires observational information needed for the identification of a parasite from the user. The user selects a description f...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(88)90037-5

    authors: Theodoropoulos G

    更新日期:1988-03-01 00:00:00

  • Integration of information systems: assessing its quality.

    abstract::Due to organizational and technological changes the need for integrating information systems within healthcare institutions, has increased enormously. Although the technical means for systems integration have definitely matured, integration methodologies are still in their infancy. Two important questions regarding sy...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/s0169-2607(00)00086-9

    authors: Toussaint PJ,Bakker AR,Groenewegen LP

    更新日期:2001-01-01 00:00:00

  • ARTEMIS-2: an application development experiment with the HELIOS environment.

    abstract::A medical application is a highly complex system that embraces many data types and a very large number of data processing functions and methods. The development of integrated software engineering environments has deeply changed the conception of applications and the profile of the application developers. In this paper...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:

    authors: Lemaitre D,Jaulent MC,Günnel U,Demiris AM,Michel PA,Rassinoux AM,Göransson B,Olsson E,Degoulet P

    更新日期:1994-12-01 00:00:00

  • Coupling image processing and stress analysis for damage identification in a human premolar tooth.

    abstract::Non-carious cervical lesions are characterized by the loss of dental hard tissue at the cement-enamel junction (CEJ). Exceeding stresses are therefore generated in the cervical region of the tooth that cause disruption of the bonds between the hydroxyapatite crystals, leading to crack formation and eventual loss of en...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2010.06.009

    authors: Andreaus U,Colloca M,Iacoviello D

    更新日期:2011-08-01 00:00:00

  • A simple computer programme for biokinetic study of 99Tcm-radiopharmaceuticals.

    abstract::A simple programme has been written in GW BASIC to calculate the percentage activity of 99Tcm-radiopharmaceuticals in different tissues after biodistribution. The programme is efficient, easy to handle and produces a permanent record in terms of a final report. ...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(94)90139-2

    authors: Imran MB,Khurshid SJ,Anwar K

    更新日期:1994-02-01 00:00:00

  • Construction and visualisation of three-dimensional facial statistics.

    abstract::This paper presents a new method for the construction of three-dimensional (3D) probabilistic facial averages and demonstrates the potential for applications in clinical craniofacial research and patient assessment. Averages are constructed from a database of registered laser-range scans and photographic images using ...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/s0169-2607(00)00072-9

    authors: Tiddeman B,Duffy N,Rabey G

    更新日期:2000-08-01 00:00:00

  • Robust estimation of event-related potentials via particle filter.

    abstract:BACKGROUND AND OBJECTIVE:In clinical examinations and brain-computer interface (BCI) research, a short electroencephalogram (EEG) measurement time is ideal. The use of event-related potentials (ERPs) relies on both estimation accuracy and processing time. We tested a particle filter that uses a large number of particle...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2015.11.006

    authors: Fukami T,Watanabe J,Ishikawa F

    更新日期:2016-03-01 00:00:00

  • A novel method for retinal exudate segmentation using signal separation algorithm.

    abstract::Diabetic retinopathy is one of the major causes of blindness in the world. Early diagnosis of this disease is vital to the prevention of visual loss. The analysis of retinal lesions such as exudates, microaneurysms and hemorrhages is a prerequisite to detect diabetic disorders such as diabetic retinopathy and macular ...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2016.05.016

    authors: Imani E,Pourreza HR

    更新日期:2016-09-01 00:00:00

  • The use of a modified Fedorov exchange algorithm to optimise sampling times for population pharmacokinetic experiments.

    abstract::We propose a new algorithm for optimising sampling times for population pharmacokinetic experiments using D-optimality. The algorithm was used in conjunction with the population Fisher information matrix as implemented in MATLAB (PFIM 1.1 and 1.2) to evaluate population pharmacokinetic designs. The new algorithm based...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2005.07.001

    authors: Ogungbenro K,Graham G,Gueorguieva I,Aarons L

    更新日期:2005-11-01 00:00:00

  • Detection of high-frequency respiratory movements during sleep.

    abstract::Sleep-related breathing disorders are common in adults and they have a significant impact on vigilance and quality of life. Previous studies have shown the validity of the static-charge-sensitive bed (SCSB) in monitoring breathing abnormalities during sleep. A whole nights sleep study produces a signal with considerab...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/s0169-2607(99)00043-7

    authors: Aittokallio T,Gyllenberg M,Järvi J,Nevalainen O,Polo O

    更新日期:2000-03-01 00:00:00

  • Utility of combining two diagnostic tests.

    abstract::Methods for evaluating a single diagnostic test with reference to the disease prevalence in a given population include sensitivity, specificity, positive predictive value, negative predictive value, and accuracy. Patient disease status and, ultimately, the treatment course is determined by the outcome of these diagnos...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(91)90119-e

    authors: Borowiak D,Reed JF 3rd

    更新日期:1991-07-01 00:00:00

  • From floated to conventional confidence intervals for the relative risks based on published dose-response data.

    abstract::A dose-response meta-analysis of epidemiological studies can encounter different types of confidence intervals (floated vs. conventional). This paper illustrates how to back calculate conventional confidence intervals from a set of relative risks reported with floated confidence intervals or floated standard errors. F...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章,meta分析

    doi:10.1016/j.cmpb.2009.11.005

    authors: Orsini N

    更新日期:2010-04-01 00:00:00

  • Image analysis and synthesis of multimodal images in medicine.

    abstract::Radiologic and clinical practice can be enhanced by improved access to multimodal image information. Analysis, visualization, method characteristic image processing and image synthesis is needed not only for the interpretation of the images but also for performing effective consultations with clinical colleagues and c...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(94)90070-1

    authors: Englmeier KH,Haubner M,Fink U,Fink B

    更新日期:1994-06-01 00:00:00

  • smcure: an R-package for estimating semiparametric mixture cure models.

    abstract::The mixture cure model is a special type of survival models and it assumes that the studied population is a mixture of susceptible individuals who may experience the event of interest, and cure/non-susceptible individuals who will never experience the event. For such data, standard survival models are usually not appr...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2012.08.013

    authors: Cai C,Zou Y,Peng Y,Zhang J

    更新日期:2012-12-01 00:00:00

  • Prediction of hemodynamic changes towards PEEP titrations at different volemic levels using a minimal cardiovascular model.

    abstract::A cardiovascular system model and parameter identification method have previously been validated for porcine experiments of induced pulmonary embolism and positive end-expiratory pressure (PEEP) titrations, accurately tracking all the main hemodynamic trends. In this research, the model and parameter identification pr...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2008.03.004

    authors: Starfinger C,Chase JG,Hann CE,Shaw GM,Lambert P,Smith BW,Sloth E,Larsson A,Andreassen S,Rees S

    更新日期:2008-08-01 00:00:00

  • Entropy analysis of muscular near-infrared spectroscopy (NIRS) signals during exercise programme of type 2 diabetic patients: quantitative assessment of muscle metabolic pattern.

    abstract::Diabetes mellitus (DM) is a metabolic disorder that is widely rampant throughout the world population these days. The uncontrolled DM may lead to complications of eye, heart, kidney and nerves. The most common type of diabetes is the type 2 diabetes or insulin-resistant DM. Near-infrared spectroscopy (NIRS) technology...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2013.08.018

    authors: Molinari F,Acharya UR,Martis RJ,De Luca R,Petraroli G,Liboni W

    更新日期:2013-12-01 00:00:00

  • Dynamic composition of medical support services in the ICU: Platform and algorithm design details.

    abstract::The Intensive Care Unit (ICU) is an extremely data-intensive environment where each patient needs to be monitored 24/7. Bedside monitors continuously register vital patient values (such as serum creatinine, systolic blood pressure) which are recorded frequently in the hospital database (e.g. every 2 min in the ICU of ...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2010.03.019

    authors: Hristoskova A,Moeyersoon D,Van Hoecke S,Verstichel S,Decruyenaere J,De Turck F

    更新日期:2010-12-01 00:00:00

  • A neural network approach to segment brain blood vessels in digital subtraction angiography.

    abstract:BACKGROUND AND OBJECTIVE:Cerebrovascular diseases (CVDs) affect a large number of patients and often have devastating outcomes. The hallmarks of CVDs are the abnormalities formed on brain blood vessels, including protrusions, narrows, widening, and bifurcation of the blood vessels. CVDs are often diagnosed by digital s...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2019.105159

    authors: Zhang M,Zhang C,Wu X,Cao X,Young GS,Chen H,Xu X

    更新日期:2020-03-01 00:00:00

  • A Diadochokinesis-based expert system considering articulatory features of plosive consonants for early detection of Parkinson's disease.

    abstract:BACKGROUND AND OBJECTIVE:A new expert system is proposed to discriminate healthy people from people with Parkinson's Disease (PD) in early stages by using Diadochokinesis tests. METHODS:The system is based on temporal and spectral features extracted from the Voice Onset Time (VOT) segments of /ka/ syllables, whose bou...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2017.11.010

    authors: Montaña D,Campos-Roca Y,Pérez CJ

    更新日期:2018-02-01 00:00:00

  • Using the job-exposure matrix for elaborating job histories.

    abstract::A first software (JHS) for the elaboration of job histories oriented toward risks was designed and results published In an article "A software for the elaboration of Job Histories". This article presents a second software (JES), based on the use of a job-exposure matrix designed for one company. The matrix is essentia...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(92)90056-d

    authors: Martin JM,Mouaddib AI,Bouzid M,Robaux P

    更新日期:1992-09-01 00:00:00

  • The importance of proper seeding of the Applesoft pseudorandom number generator.

    abstract::The popularity of the use of Apple II/IIe hardware in medical applications is evidenced by the variety of articles devoted to the use of this hardware in biomedical research and medical practice. Many of these applications are of a stochastic nature, including simulations, and depend on the Applesoft random number gen...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/0169-2607(88)90002-8

    authors: Gleason JM

    更新日期:1988-05-01 00:00:00

  • Prognostic value of tumor volume for patients with advanced lung cancer treated with chemotherapy.

    abstract:BACKGROUND AND OBJECTIVE:We aim to develop a reference system utilizing computed tomography to calculate changes in tumor volume of lung cancer patients after chemotherapy to assist physicians in clinical treatment and evaluation. METHODS:Image processing techniques were used to analyze the computed tomography of lung...

    journal_title:Computer methods and programs in biomedicine

    pub_type: 杂志文章

    doi:10.1016/j.cmpb.2017.03.021

    authors: Kuo CJ,Ke BH,Wu NY,Kuo J,Hsu HH

    更新日期:2017-06-01 00:00:00