Examination of Gould's modified S1 (mS1) selective medium and Angle's non-selective medium for describing the diversity of Pseudomonas spp. in soil and root environments.

abstract：:The biodegradation of alicyclic compounds was studied under methanogenic and sulfate-reducing conditions in samples from a gas condensate-contaminated aquifer amended with whole gasoline. Aquifer microorganisms exhibited previously unrecognized anaerobic alicyclic hydrocarbon metabolism of a broad range of substrates ...

journal_title：FEMS microbiology ecology

authors： Townsend GT,Prince RC,Suflita JM

更新日期：2004-07-01 00:00:00

abstract：:The biology and biochemistry of plasmid transfer in soil bacteria is currently under active investigation because of its central role in prokaryote adaptation and evolution. In this work, we examined the conjugal properties of the cryptic plasmids present in a collection of the N(2)-fixing legume-symbiont Sinorhizobiu...

journal_title：FEMS microbiology ecology

authors： Pistorio M,Giusti MA,Del Papa MF,Draghi WO,Lozano MJ,Tejerizo GT,Lagares A

更新日期：2008-09-01 00:00:00

abstract：:The Capuchin Catacombs of Palermo contain over 1800 preserved bodies dating from the 16th to 20th centuries AD and showing evidence of biodeterioration. An extensive microbiological and molecular investigation was recently performed. Samples were taken from skin, muscle, hair, bone, stuffing materials, clothes, and su...

journal_title：FEMS microbiology ecology

authors： Piñar G,Piombino-Mascali D,Maixner F,Zink A,Sterflinger K

更新日期：2013-11-01 00:00:00

abstract：:Abstract In a previous study, we isolated a collection of atrazine-degrading bacteria from various soils. The aim of this study was to localise the atrazine-degrading genes in these 25 atrazine-degrading strains. In the case of the Gram-negative strains of Chelatobacter heintzii, six to seven plasmids were observed. T...

journal_title：FEMS microbiology ecology

authors： Rousseaux S,Soulas G,Hartmann A

更新日期：2002-07-01 00:00:00

abstract：:Methanogenic cultures were enriched from an air-dried rice field soil and incubated under anaerobic conditions at 30 degrees C with cellulose as substrate (ET1). The culture was then transferred and further incubated at either 15 degrees C (E15) or 30 degrees C (E30), to establish stable cultures that methanogenically...

journal_title：FEMS microbiology ecology

authors： Chin K,Lukow T,Stubner S,Conrad R

更新日期：1999-12-01 00:00:00

abstract：:Methane-oxidizing bacteria are the only terrestrial sink for atmospheric methane. Little is known, however, about the methane-oxidizing bacteria that are responsible for the consumption of atmospheric methane, or about the factors that influence their activity and diversity in soil. Effects of fire and its end-product...

journal_title：FEMS microbiology ecology

authors： Jaatinen K,Knief C,Dunfield PF,Yrjålå K,Fritze H

更新日期：2004-11-01 00:00:00

abstract：:Microbial community composition is essential for aquatic ecosystem functions and has been explored across diverse environments and various spatial scales. However, documented patterns are often based on samples from spatially/geographically separated locations or sites. Here, we define sampling volume as spatial scale...

journal_title：FEMS microbiology ecology

authors： Liang JL,Li XJ,Shu HY,Wang P,Kuang JL,Liu J,Zhang MM,Shu WS,Huang LN

更新日期：2017-10-01 00:00:00

abstract：:Rimicaris exoculata dominates the megafauna of several Mid-Atlantic Ridge hydrothermal sites. Its gut is full of sulphides and iron-oxide particles and harbours microbial communities. Although a trophic symbiosis has been suggested, their role remains unclear. In vivo starvation experiments in pressurized vessels were...

journal_title：FEMS microbiology ecology

authors： Durand L,Zbinden M,Cueff-Gauchard V,Duperron S,Roussel EG,Shillito B,Cambon-Bonavita MA

更新日期：2010-02-01 00:00:00

abstract：:Although anaerobic biodegradation of di-n-butyl phthalic acid ester (DBP) has been studied over the past decade, only little is known about the microorganisms involved in the biological anaerobic degradation pathways. The aim of this work is to characterize the microbial community dynamics in enrichment cultures degra...

journal_title：FEMS microbiology ecology

authors： Trably E,Batstone DJ,Christensen N,Patureau D,Schmidt JE

更新日期：2008-11-01 00:00:00

abstract：:Autotrophic ammonia-oxidising bacteria (AOB) are a crucial component of the microbial communities of nitrifying wastewater treatment systems. Nitrification is known to occur in reactors of different configuration, but whether AOB communities are different in reactors of different design is unknown. We compared the div...

journal_title：FEMS microbiology ecology

authors： Rowan AK,Snape JR,Fearnside D,Barer MR,Curtis TP,Head IM

更新日期：2003-03-01 00:00:00

abstract：:Abstract The protocol used in the present study was a long-term mesocosm experiment where the microbial succession around live barley roots and subsequent decomposing roots was assessed after seed coating with either the antagonistic strain Pseudomonas fluorescens DR54-BN14 or the fungicide imazalil. Four diversity me...

journal_title：FEMS microbiology ecology

authors： Thirup L,Johansen A,Winding A

更新日期：2003-04-01 00:00:00

abstract：:In contrast to the pervasive occurrence of denitrification in soils, anammox (anaerobic ammonium oxidation) is a spatially restricted process that depends on specific ecological conditions. To identify the factors that constrain the distribution and activity of anammox bacteria in terrestrial environments, we investig...

journal_title：FEMS microbiology ecology

authors： Bagnoud A,Guye-Humbert S,Schloter-Hai B,Schloter M,Zopfi J

更新日期：2020-02-01 00:00:00

abstract：:Tedania sp. is a dominant sponge that is ubiquitous along the southeast coast of China. High-throughput sequencing and transmission electron microscopy were used to describe a detailed profile of sponge-associated microbiomes at seven life stages: adult, embryo-containing spawning adult, embryo, pre-competent larva at...

journal_title：FEMS microbiology ecology

authors： Wu S,Ou H,Liu T,Wang D,Zhao J

更新日期：2018-05-01 00:00:00

abstract：:The honey bee worker gut hosts a community of bacteria that comprises 8-10 core bacterial species, along with a set of more transient environmental microbes. Collectively, these microbes break down and ferment saccharides present in the host's diet, based on analyses of metagenomes, and metatranscriptomes from this en...

journal_title：FEMS microbiology ecology

authors： Lee FJ,Miller KI,McKinlay JB,Newton ILG

更新日期：2018-08-01 00:00:00

abstract：:The attachment of motile and non-motile strains of Pseudomonas putida PaW8 to sterile wheat roots was assessed in both non-competitive and intra-specific competitive assays. The motile strain showed significantly greater attachment to wheat roots than non-motile strains in phosphate buffer. Overall, the motile strain ...

journal_title：FEMS microbiology ecology

authors： Turnbull GA,Morgan JA,Whipps JM,Saunders JR

更新日期：2001-03-01 00:00:00

abstract：:Aerobic anoxygenic phototrophic bacteria (AAPB) are a group of heterotrophic bacteria capable of photosynthesis. The dynamics of AAPB in the East China Sea, a typical marginal sea characterized by diverse physical-chemical and ecological conditions, were investigated from April 2002 to September 2003. The results show...

journal_title：FEMS microbiology ecology

authors： Zhang Y,Jiao N

更新日期：2007-09-01 00:00:00

abstract：:Anaerobic digestion of olive mill wastewaters is generally performed in anaerobic contact bioreactors where the removal of toxic phenols is often unsatisfactory. In the present work we show that a granular activated carbon packed-bed biofilm reactor can be successfully used to achieve effective and reproducible wastew...

journal_title：FEMS microbiology ecology

authors： Bertin L,Colao MC,Ruzzi M,Fava F

更新日期：2004-06-01 00:00:00

abstract：:Soil RNA and DNA were coextracted along a contamination gradient at a landfarming field with aged crude oil contamination to investigate pollution-dependent differences in 16S rRNA and rRNA gene pools. Microbial biomass correlated with nucleic acid yields as well as bacterial community change, indicating that the same...

journal_title：FEMS microbiology ecology

authors： Mikkonen A,Santalahti M,Lappi K,Pulkkinen AM,Montonen L,Suominen L

更新日期：2014-10-01 00:00:00

abstract：:In the present study, it was sought to compare yeast microbiota of wild and captive Macrobrachium amazonicum and evaluate the antifungal susceptibility and production of virulence factors by the recovered isolates of Candida spp. Additionally, cultivation water was monitored for the presence of fungi. Overall, 26 yeas...

journal_title：FEMS microbiology ecology

authors： Brilhante RS,Paiva MA,Sampaio CM,Teixeira CE,Castelo-Branco DS,Leite JJ,Moreira CA,Silva LP,Cordeiro RA,Monteiro AJ,Sidrim JJ,Rocha MF

更新日期：2011-05-01 00:00:00

abstract：:It has been postulated that a variety of physically undefended marine invertebrates have evolved strategies to control microbial epibiosis chemically. Ecologically meaningful experiments that demonstrate chemically mediated antibacterial effects are difficult due to the small number of cultivable bacteria. Based on th...

journal_title：FEMS microbiology ecology

authors： Harder T,Lau SC,Tam WY,Qian PY

更新日期：2004-01-01 00:00:00

abstract：:Abstract To better understand the trigger for and use of motility in marine bacterial chemotaxis, specific (amino acids) chemical stimuli were used to test the effect on bacterial speed and reorientation. An assay system was developed to analyse bacterial behavioural responses to point-like nutrient sources (beads 10-...

journal_title：FEMS microbiology ecology

authors： Barbara GM,Mitchell JG

更新日期：2003-02-01 00:00:00

abstract：:Potato cultivation has a strategic role as a food source for the human population. Its promising future development relies on improving the control of the numerous microbial diseases that affect its growth. Numerous and recent studies on the potato rhizosphere, mycorrhizosphere and endorhiza reveal the presence of a d...

journal_title：FEMS microbiology ecology

authors： Diallo S,Crépin A,Barbey C,Orange N,Burini JF,Latour X

更新日期：2011-03-01 00:00:00

abstract：:Besides water, nitrogen is the limiting factor for biomass production in arid ecosystems. Global climatic changes are exacerbating aridity levels, and the response of nitrogen-transforming microorganisms to these changes is not clear yet. Using semi-arid and arid ecosystems as surrogates for conditions of increased ar...

journal_title：FEMS microbiology ecology

authors： Sher Y,Zaady E,Nejidat A

更新日期：2013-12-01 00:00:00

abstract：:The rumen microbiota enable important metabolic functions to the host cattle. Feeding of starch-rich concentrate feedstuffs to cattle has been demonstrated to increase the risk of metabolic disorders and to significantly alter the rumen microbiome. Thus, alternative feeding strategies like the use of high-quality hay,...

journal_title：FEMS microbiology ecology

authors： Klevenhusen F,Petri RM,Kleefisch MT,Khiaosa-Ard R,Metzler-Zebeli BU,Zebeli Q

更新日期：2017-09-01 00:00:00

abstract：:The McMurdo Dry Valleys collectively comprise the most extensive ice-free region in Antarctica and are considered one of the coldest arid environments on Earth. In low-altitude maritime-associated valleys, mineral soil profiles show distinct horizontal structuring, with a surface arid zone overlying a moist and biolog...

journal_title：FEMS microbiology ecology

authors： Stomeo F,Makhalanyane TP,Valverde A,Pointing SB,Stevens MI,Cary CS,Tuffin MI,Cowan DA

更新日期：2012-11-01 00:00:00

abstract：:EFSA responded to our perspective article on the safe use of the insect pathogen Bacillus thrurigiensis (Bt). In doing so they admitted that there is no direct evidence to suggest that B. thuringiensis can cause diarrhoea. They nevertheless continue to repeat the assertion that Bt cannot be distinguished from Bacillus...

journal_title：FEMS microbiology ecology

authors： Raymond B,Federici BA

更新日期：2018-01-01 00:00:00

abstract：:The soil microbiome plays an important role in the establishment of weeds and invasive plants. They associate with microorganisms supporting their growth and health. Weed management strategies, like tillage and herbicide treatments, to control weeds generally alter soil structure going alongside with changes in the mi...

journal_title：FEMS microbiology ecology

authors： Trognitz F,Hackl E,Widhalm S,Sessitsch A

更新日期：2016-10-01 00:00:00

abstract：:Archaeal communities and the factors regulating their diversity in high altitude lakes are poorly understood. Here, we provide the first high-throughput sequencing study of Archaea from Tibetan Plateau lake sediments. We analyzed twenty lake sediments from the world's highest and largest plateau and found diverse arch...

journal_title：FEMS microbiology ecology

authors： Liu Y,Priscu JC,Xiong J,Conrad R,Vick-Majors T,Chu H,Hou J

更新日期：2016-03-01 00:00:00

abstract：:Coral-associated microbial communities from three coral species (Pocillopora damicornis, Acropora tenuis and Favites abdita) were examined every 3 months (January, March, June, October) over a period of 1 year on Ningaloo Reef, Western Australia. Tissue from corals was collected throughout the year and additional samp...

journal_title：FEMS microbiology ecology

authors： Ceh J,Van Keulen M,Bourne DG

更新日期：2011-01-01 00:00:00

abstract：:There are an increasing number of assays available for fungal plant pathogens based on DNA technology. We have developed such an assay for Gaeumannomyces graminis var. tritici (Ggt) in soil, using slot-blot hybridisation. To ensure the validity of DNA-based soil assays for the fungus, it is important to determine the ...

journal_title：FEMS microbiology ecology

authors： Herdina,Neate S,Jabaji-Hare S,Ophel-Keller K

更新日期：2004-02-01 00:00:00