Exploring population genetic structure in three species of Lesser Antillean bats.

Abstract:

:We explore population genetic structure in phyllostomid bats (Ardops nichollsi, Brachyphylla cavernarum and Artibeus jamaicensis) from the northern Lesser Antilles by investigating the degree to which island populations are genetically differentiated. Our hypothesis, that the island populations are genetically distinct because of a combination of founding events, limited migration and genetic drift exacerbated by catastrophe-induced fluctuations in population size, is derived from a priori hypotheses erected in the literature. The first prediction of this hypothesis, that within each species island populations are monophyletic, was tested using a parametric bootstrap approach. Island monophyly could not be rejected in Ardops nichollsi (P = 0.718), but could be rejected in B. cavernarum (P < 0.001) and Artibeus jamaicensis (P < 0.001). A second prediction, that molecular variance is partitioned among islands, was tested using an amova and was rejected in each species [Ardops nichollsi (P = 0.697); B. cavernarum (P = 0.598); Artibeus jamaicensis (P = 0.763)]. In B. cavernarum and Artibeus jamaicensis, the admixture in mitochondrial haplotypes from islands separated by > 100 km of ocean can be explained either by interisland migration or by incomplete lineage sorting of ancestral polymorphism in the source population. As an a posteriori test of lineage sorting, we used simulations of gene trees within a population tree to suggest that lineage sorting is an unlikely explanation for the observed pattern of nonmonophyly in Artibeus jamaicensis (PW < 0.01; PSE = 0.04), but cannot be rejected in B. cavernarum (PW = 0.81; PSE = 0.79). A conservative interpretation of the molecular data is that island populations of Artibeus jamaicensis, although isolated geographically, are not isolated genetically.

journal_name

Mol Ecol

journal_title

Molecular ecology

authors

Carstens BC,Sullivan J,Davalos LM,Larsen PA,Pedersen SC

doi

10.1111/j.1365-294X.2004.02250.x

subject

Has Abstract

pub_date

2004-09-01 00:00:00

pages

2557-66

issue

9

eissn

0962-1083

issn

1365-294X

pii

MEC2250

journal_volume

13

pub_type

杂志文章
  • Marine genetic swamping: hybrids replace an obligately estuarine fish.

    abstract::Populations of obligately estuarine taxa are potentially small and isolated and may lack genetic variation and display regional differentiation as a result of drift and inbreeding. Hybridization with a wide-ranging marine congener should introduce genetic variation and reduce the effects of inbreeding depression and g...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2009.04501.x

    authors: Roberts DG,Gray CA,West RJ,Ayre DJ

    更新日期:2010-02-01 00:00:00

  • Controlling false discoveries in genome scans for selection.

    abstract::Population differentiation (PD) and ecological association (EA) tests have recently emerged as prominent statistical methods to investigate signatures of local adaptation using population genomic data. Based on statistical models, these genomewide testing procedures have attracted considerable attention as tools to id...

    journal_title:Molecular ecology

    pub_type: 杂志文章,评审

    doi:10.1111/mec.13513

    authors: François O,Martins H,Caye K,Schoville SD

    更新日期:2016-01-01 00:00:00

  • The potential for mycobiont sharing between shrubs and seedlings to facilitate tree establishment after wildfire at Alaska arctic treeline.

    abstract::Root-associated fungi, particularly ectomycorrhizal fungi (EMF), are critical symbionts of all boreal tree species. Although climatically driven increases in wildfire frequency and extent have been hypothesized to increase vegetation transitions from tundra to boreal forest, fire reduces mycorrhizal inoculum. Therefor...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14143

    authors: Hewitt RE,Chapin FS 3rd,Hollingsworth TN,Taylor DL

    更新日期:2017-07-01 00:00:00

  • Stability of genetic variance and covariance for reproductive characters in the face of climate change in a wild bird population.

    abstract::Global warming has had numerous effects on populations of animals and plants, with many species in temperate regions experiencing environmental change at unprecedented rates. Populations with low potential for adaptive evolutionary change and plasticity will have little chance of persistence in the face of environment...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2007.03436.x

    authors: Garant D,Hadfield JD,Kruuk LE,Sheldon BC

    更新日期:2008-01-01 00:00:00

  • The spatial distribution of avian relatives: do obligate army-ant-following birds roost and feed near family members?

    abstract::The ocellated antbird (Phaenostictus mcleannani) feeds in groups and therefore is an informative species in which to study the biological factors that modulate avian group living. These birds congregate at swarms of army ants to capture fleeing prey, and previous observations suggest that males may be philopatric, fee...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2008.03811.x

    authors: Chaves-Campos J,DeWoody JA

    更新日期:2008-06-01 00:00:00

  • Reproductive isolation among deep-water cichlid fishes of Lake Malawi differing in monochromatic male breeding dress.

    abstract::Male nuptial colour hues are important for the maintenance of reproductive isolation among cichlid fish species, and environmental changes that lead to narrower light spectra can lead to hybridization. However, cichlid species can naturally co-occur in narrow light spectrum habitats, such as turbid shallow lakes and t...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2006.03173.x

    authors: Genner MJ,Nichols P,Carvalho GR,Robinson RL,Shaw PW,Turner GF

    更新日期:2007-02-01 00:00:00

  • Multiple dispersal vectors drive range expansion in an invasive marine species.

    abstract::The establishment and subsequent spread of invasive species is widely recognized as one of the most threatening processes contributing to global biodiversity loss. This is especially true for marine and estuarine ecosystems, which have experienced significant increases in the number of invasive species with the increa...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13817

    authors: Richardson MF,Sherman CD,Lee RS,Bott NJ,Hirst AJ

    更新日期:2016-10-01 00:00:00

  • Genetic population structure of the white sifaka (Propithecus verreauxi verreauxi) at Beza Mahafaly Special Reserve, southwest Madagascar (1992-2001).

    abstract::Gene flow within and between social groups is contingent on behaviourally mediated patterns of mating and dispersal. To understand how these patterns affect the genetic structure of primate populations, long-term data are required. In this study, we analyse 10 years of demographic and genetic data from a wild lemur po...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2003.01909.x

    authors: Lawler RR,Richard AF,Riley MA

    更新日期:2003-09-01 00:00:00

  • Polymorphic molecular markers from anonymous nuclear DNA for genetic analysis of populations.

    abstract::A simple method is presented for developing polymorphic, anonymous DNA markers suitable for population genetic studies. Anonymous DNA fragments are screened for sequence variability using a common mutation detection technique (single strand conformation polymorphism analysis; SSCP) and locus-specific PCR primers are d...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.1997.00192.x

    authors: Bagley MJ,Medrano JF,Gall GA

    更新日期:1997-04-01 00:00:00

  • Temporal change in the genetic structure between and within cohorts of a marine fish, Diplodus sargus, induced by a large variance in individual reproductive success.

    abstract::Temporal changes at 16 allozyme loci in the Diplodus sargus population of Banyuls-sur-Mer (Mediterranean Sea, France) were monitored. Temporal genetic variation within a single population was examined over two temporal scales: (i) among three year-classes sampled at the same age, and (ii) within a single year-class sa...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2002.01521.x

    authors: Planes S,Lenfant P

    更新日期:2002-08-01 00:00:00

  • Sexual conflict and the maintenance of genetic variation in natural populations.

    abstract::Understanding the factors that maintain genetic variation in natural populations is a foundational goal of evolutionary biology. To this end, population geneticists have developed a variety of models that can produce stable polymorphisms. In one of the earliest models, Owen () demonstrated that differences in selectio...

    journal_title:Molecular ecology

    pub_type: 评论,新闻

    doi:10.1111/mec.14787

    authors: Meisel RP

    更新日期:2018-09-01 00:00:00

  • Haplotype (mtDNA) diversity of brown trout Salmo trutta in tributaries of the Austrian Danube: massive introgression of Atlantic basin fish--by man or nature?

    abstract::Mitochondrial haplotype diversity in 27 populations of brown trout, Salmo trutta L., in Austria was investigated by sequencing the 5' end of the mitochondrial DNA (mtDNA) control region. Although all populations are within the Danube drainage, 44% of all individuals carried Atlantic basin haplotypes. It is argued that...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2001.01261.x

    authors: Weiss S,Schlötterer C,Waidbacher H,Jungwirth M

    更新日期:2001-05-01 00:00:00

  • Genomic parallelism and lack thereof in contrasting systems of three-spined sticklebacks.

    abstract::Parallel evolution and the extent to which it involves gene reuse have attracted much interest. Whereas it has theoretically been predicted under which circumstances gene reuse is expected, empirical studies that directly compare systems showing high and low parallelism are rare. Three-spined stickleback (Gasterosteus...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14782

    authors: Liu S,Ferchaud AL,Grønkjaer P,Nygaard R,Hansen MM

    更新日期:2018-12-01 00:00:00

  • Parent and offspring genotypes influence gene expression in early life.

    abstract::Parents can have profound effects on offspring fitness. Little, however, is known about the mechanisms through which parental genetic variation influences offspring physiology in natural systems. White-throated sparrows (Zonotrichia albicollis, WTSP) exist in two genetic morphs, tan and white, controlled by a large po...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.15205

    authors: Newhouse DJ,Barcelo-Serra M,Tuttle EM,Gonser RA,Balakrishnan CN

    更新日期:2019-09-01 00:00:00

  • Asexual genome evolution in the apomictic Ranunculus auricomus complex: examining the effects of hybridization and mutation accumulation.

    abstract::Asexual lineages are thought to be prone to extinction because of deleterious mutation accumulation (Muller's ratchet). Here, we analyse genomic effects of hybridity, polyploidy and allelic divergence in apomictic plants, and identify loci under divergent selection among sexual/apomictic lineages. RNAseq was used to s...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12533

    authors: Pellino M,Hojsgaard D,Schmutzer T,Scholz U,Hörandl E,Vogel H,Sharbel TF

    更新日期:2013-12-01 00:00:00

  • QTL mapping of freezing tolerance: links to fitness and adaptive trade-offs.

    abstract::Local adaptation, defined as higher fitness of local vs. nonlocal genotypes, is commonly identified in reciprocal transplant experiments. Reciprocally adapted populations display fitness trade-offs across environments, but little is known about the traits and genes underlying fitness trade-offs in reciprocally adapted...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12862

    authors: Oakley CG,Ågren J,Atchison RA,Schemske DW

    更新日期:2014-09-01 00:00:00

  • Phylogeography of the high alpine plant Senecio halleri (Asteraceae) in the European Alps: in situ glacial survival with postglacial stepwise dispersal into peripheral areas.

    abstract::Whether alpine plant species survived Pleistocene glaciations in situ on high alpine nunatak mountains is still under debate. To test this hypothesis, Senecio halleri, a high alpine and endemic species with a narrow distribution range in the European Alps, was chosen as a model organism. Polymerase chain reaction-rest...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2007.03273.x

    authors: Bettin O,Cornejo C,Edwards PJ,Holderegger R

    更新日期:2007-06-01 00:00:00

  • Unearthing the impact of human disturbance on a notorious weed.

    abstract::Large-scale anthropogenic changes in the environment are reshaping global biodiversity and the evolutionary trajectory of many species. Evolutionary mechanisms that allow organisms to thrive in this rapidly changing environment are just beginning to be investigated (Hoffmann & Sgrò 2011; Colautti & Barrett 2013). Weed...

    journal_title:Molecular ecology

    pub_type: 评论,杂志文章

    doi:10.1111/mec.12717

    authors: Hodgins K

    更新日期:2014-05-01 00:00:00

  • The detectability half-life in arthropod predator-prey research: what it is, why we need it, how to measure it, and how to use it.

    abstract::Molecular gut-content analysis enables detection of arthropod predation with minimal disruption of ecosystem processes. Most assays produce only qualitative results, with each predator testing either positive or negative for target prey remains. Nevertheless, they have yielded important insights into community process...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12552

    authors: Greenstone MH,Payton ME,Weber DC,Simmons AM

    更新日期:2014-08-01 00:00:00

  • MHC diversity and the association to nematode parasitism in the yellow-necked mouse (Apodemus flavicollis).

    abstract::In vertebrates, the genes of the major histocompatibility complex (MHC) are among the most debated candidates accounting for co-evolutionary processes of host-parasite interaction at the molecular level. The exceptionally high allelic polymorphism found in MHC loci is believed to be maintained by pathogen-driven selec...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2005.02557.x

    authors: Meyer-Lucht Y,Sommer S

    更新日期:2005-06-01 00:00:00

  • Differential gene expression in narrow- and broad-headed European glass eels (Anguilla anguilla) points to a transcriptomic link of head shape dimorphism with growth rate and chemotaxis.

    abstract::One of the major challenges in evolutionary biology is to understand the mechanisms underlying morphological dimorphism and plasticity, including the genomic basis of traits and links to ecology. At the yellow eel stage of the European eel (Anguilla anguilla), two morphotypes are found: broad- and narrow-heads. This d...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14155

    authors: De Meyer J,Maes GE,Dirks RP,Adriaens D

    更新日期:2017-08-01 00:00:00

  • Population genetic structure of Japanese wild soybean (Glycine soja) based on microsatellite variation.

    abstract::The research objectives were to determine aspects of the population dynamics relevant to effective monitoring of gene flow in the soybean crop complex in Japan. Using 20 microsatellite primers, 616 individuals from 77 wild soybean (Glycine soja) populations were analysed. All samples were of small seed size (< 0.03 g)...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2006.02854.x

    authors: Kuroda Y,Kaga A,Tomooka N,Vaughan DA

    更新日期:2006-04-01 00:00:00

  • No evidence of inbreeding avoidance despite demonstrated survival costs in a polygynous rodent.

    abstract::Individuals are generally predicted to avoid inbreeding because of detrimental fitness effects. However, several recent studies have shown that limited inbreeding is tolerated by some vertebrate species. Here, we examine the costs and benefits of inbreeding in a largely polygynous rodent, the yellow-bellied marmot (Ma...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2011.05389.x

    authors: Olson LE,Blumstein DT,Pollinger JR,Wayne RK

    更新日期:2012-02-01 00:00:00

  • Assessing niche partitioning of co-occurring sibling bat species by DNA metabarcoding.

    abstract::Niche partitioning through foraging is a mechanism likely involved in facilitating the coexistence of ecologically similar and co-occurring animal species by separating their use of resources. Yet, this mechanism is not well understood in flying insectivorous animals. This is particularly true of bats, where many ecol...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14508

    authors: Arrizabalaga-Escudero A,Clare EL,Salsamendi E,Alberdi A,Garin I,Aihartza J,Goiti U

    更新日期:2018-03-01 00:00:00

  • Multiple gene genealogies and AFLPs suggest cryptic speciation and long-distance dispersal in the basidiomycete Serpula himantioides (Boletales).

    abstract::Serpula himantioides (Boletales, Basidiomycota) produces thin resupinate basidiocarps on dead coniferous wood worldwide and causes damage in buildings as well. In this study, we present evidence for the existence of at least three phylogenetically defined cryptic species (referred to as Sib I-III) within the morphospe...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2005.02768.x

    authors: Kauserud H,Stensrud O,Decock C,Shalchian-Tabrizi K,Schumacher T

    更新日期:2006-02-01 00:00:00

  • Weak link between dispersal and parasite community differentiation or immunogenetic divergence in two sympatric cichlid fishes.

    abstract::Geographical isolation, habitat variation and trophic specialization have contributed to a large extent to the astonishing diversity of cichlid fishes in the Great East African lakes. Because parasite communities often vary across space and environments, parasites can accompany and potentially enhance cichlid species ...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13833

    authors: Hablützel PI,Grégoir AF,Vanhove MP,Volckaert FA,Raeymaekers JA

    更新日期:2016-11-01 00:00:00

  • Evolution rampant: house mice on Madeira.

    abstract::House mice are extra-ordinary animals -extra-ordinary in the literal sense of that word. They are pests - but also a valued laboratory animal. They are generalized rodents - and successful in habitats from tundra to tropics and from sea-level to high altitudes. They have differentiated into a perplexity of taxa, yet d...

    journal_title:Molecular ecology

    pub_type: 评论,杂志文章

    doi:10.1111/j.1365-294X.2009.04345.x

    authors: Berry RJ

    更新日期:2009-11-01 00:00:00

  • Clines and adaptive evolution in the methuselah gene region in Drosophila melanogaster.

    abstract::In an effort to characterize further the patterns of selection and adaptive evolution at the methuselah locus in Drosophila species, we extended an analysis of geographical variation to include single nucleotide polymorphisms (SNPs) in adjacent genes on either side of the mth locus, and examined the molecular variatio...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2003.01841.x

    authors: Duvernell DD,Schmidt PS,Eanes WF

    更新日期:2003-05-01 00:00:00

  • A molecular analysis of ground sloth diet through the last glaciation.

    abstract::DNA was extracted from five coprolites, excavated in Gypsum Cave, Nevada and radiocarbon dated to approximately 11 000, 20 000 and 28 500 years BP. All coprolites contained mitochondrial DNA sequences identical to a DNA sequence determined from a bone of the extinct ground sloth Nothrotheriops shastensis. A 157-bp fra...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2000.01106.x

    authors: Hofreiter M,Poinar HN,Spaulding WG,Bauer K,Martin PS,Possnert G,Pääbo S

    更新日期:2000-12-01 00:00:00

  • Current geography masks dynamic history of gene flow during speciation in northern Australian birds.

    abstract::Genome divergence is greatly influenced by gene flow during early stages of speciation. As populations differentiate, geographic barriers can constrain gene flow and so affect the dynamics of divergence and speciation. Current geography, specifically disjunction and continuity of ranges, is often used to predict the h...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14978

    authors: Peñalba JV,Joseph L,Moritz C

    更新日期:2019-02-01 00:00:00