Abstract:
:The use of Polymerase Chain Reaction-Denaturing Gradient Gel Electrophoresis (PCR-DGGE) technique in identifying the microorganisms present in commercial probiotic yoghurts and lyophilised products was evaluated. Two reference ladders were assembled constituted by PCR-amplified V2-V3 regions of 16S rDNA from bacterial species generally used as probiotics. Identification was achieved comparing the PCR-DGGE patterns obtained from the analysed products with the ladder bands. Bands from members of the same species showed the same migration distance in denaturing gel, hence supporting the identificative value of the method. The validity of the technique was also proven confirming the PCR-DGGE identification results by sequence data analysis and by species-specific PCR. General congruence between microorganisms declared on the label and those revealed by PCR-DGGE was found for probiotic yoghurts. Conversely, some discrepancies were observed for probiotic lyophilised preparations, i.e. the incorrect identification of some Bifidobacterium and Bacillus species and the presence of not declared microorganisms. PCR-DGGE turned out to be an appropriate culture-independent approach for a rapid detection of the predominant species in mixed probiotic cultures.
journal_name
Int J Food Microbioljournal_title
International journal of food microbiologyauthors
Fasoli S,Marzotto M,Rizzotti L,Rossi F,Dellaglio F,Torriani Sdoi
10.1016/s0168-1605(02)00259-3subject
Has Abstractpub_date
2003-01-26 00:00:00pages
59-70issue
1eissn
0168-1605issn
1879-3460pii
S0168160502002593journal_volume
82pub_type
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