Sequence analysis of 16S rDNA, gyrB and alkB genes of plant-associated Rhodococcus species from Tunisia.

abstract：:We aimed to define the taxonomic status of 40 haemolytic and/or proteolytic strains of the genus Acinetobacter which were previously classified into five putative species termed as genomic species 14BJ (n=9), genomic species 17 (n=9), taxon 18 (n=7), taxon 19 (n=6) and taxon 20 (n=9). The strains were recovered mostly...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nemec A,Radolfova-Krizova L,Maixnerova M,Vrestiakova E,Jezek P,Sedo O

更新日期：2016-04-01 00:00:00

abstract：:Three strains representing a novel species of the Ogataea clade were isolated by W. T. Starmer and H. J. Phaff from rotting tissue of Opuntia phaeacantha in Arizona, USA. Analyses of the sequences of the D1/D2 LSU rRNA gene, ITS1-5.8S-ITS2, and translation elongation factor-1α (EF-1 α) showed that this novel species b...

journal_title：International journal of systematic and evolutionary microbiology

authors： Naumov GI,Naumova ES,Lee CF

更新日期：2017-07-01 00:00:00

abstract：:A novel bacterium, strain Br(T), was isolated from gamma-irradiated soils of the Britannia drift, Lake Wellman Region, Antarctica. This isolate was rod-shaped, endospore forming, Gram-stain-variable, catalase-positive, oxidase-negative and strictly aerobic. Cells possessed a monotrichous flagellum. Optimal growth was ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dsouza M,Taylor MW,Ryan J,MacKenzie A,Lagutin K,Anderson RF,Turner SJ,Aislabie J

更新日期：2014-04-01 00:00:00

abstract：:Two yeast strains (TM2-16 and PT1-17(T)) were isolated by membrane filtration from samples of estuarine water collected from two mangrove forests, in Khao Lumpee-Haad Thaimueang National Park and Mu Ko Ra-Ko Prathong National Park, Phang-Nga Province, Thailand. Analysis of the D1/D2 domain of the large-subunit rDNA se...

journal_title：International journal of systematic and evolutionary microbiology

authors： Limtong S,Youngmanitchai W,Kawasaki H,Seki T

更新日期：2008-02-01 00:00:00

abstract：:A novel Gram-stain-negative, rod-shaped, non-flagellated, strictly aerobic strain with gliding motility, designated XH134(T), was isolated from surface seawater of the South Pacific Gyre (45° 58' S 163° 11' W) during the Integrated Ocean Drilling Program Expedition 329. The major respiratory quinone of strain XH134(T)...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yu T,Zhang Z,Fan X,Shi X,Zhang XH

更新日期：2014-01-01 00:00:00

abstract：:Phylogenetic analysis of 'Sarraceniospora aurea' NBRC 14752 and strain NBRC 15120, based on 16S rRNA gene sequences, revealed that these organisms are related to members of the genus Actinocorallia. These organisms contained glutamic acid, alanine and meso-diaminopimelic acid as cell-wall amino acids and the menaquino...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tamura T,Hatano K,Suzuki KI

更新日期：2007-09-01 00:00:00

abstract：:Two anaerobic, pigmented, non-spore-forming, Gram-stain-negative, rod-shaped strains isolated from the human oral cavity, OMA31(T) and OMA130, were characterized by determining their phenotypic and biochemical features, cellular fatty acid profiles and phylogenetic positions based on 16S rRNA gene sequence analysis. 1...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sakamoto M,Suzuki N,Okamoto M

更新日期：2010-03-01 00:00:00

abstract：:Two Gram-stain-negative, rod-shaped bacterial strains (C5T and C16), isolated from root nodules of Phaseolus vulgaris L. in Jiangxi Province, PR China, were characterized by using a polyphasic taxonomical approach. The phylogenetic analysis of the 16S rRNA gene and three concatenated housekeeping genes (recA-glnII-atp...

journal_title：International journal of systematic and evolutionary microbiology

authors： Huo Y,Tong W,Wang J,Wang F,Bai W,Wang E,Shi P,Chen W,Wei G

更新日期：2019-07-01 00:00:00

abstract：:DNA-DNA reassociation studies, 16S rRNA gene sequence comparisons and fatty acid analysis were used to reassess the taxonomic status of the type strain of Rhodothermus obamensis and several strains of the genus Rhodothermus isolated from widely distributed shallow marine hot springs. The results show that the type str...

journal_title：International journal of systematic and evolutionary microbiology

authors： Silva Z,Horta C,da Costa MS,Chung AP,Rainey FA

更新日期：2000-07-01 00:00:00

abstract：:A Gram-positive, non-motile actinobacterium, designated strain YIM 70177(T), was isolated from a saline soil sample from Qinghai Province, north-west China. Phylogenetic analysis of this organism based on 16S rRNA gene sequences revealed 98.3% similarity to Isoptericola variabilis DSM 10177(T). Chemotaxonomic data det...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang YQ,Schumann P,Li WJ,Chen GZ,Tian XP,Stackebrandt E,Xu LH,Jiang CL

更新日期：2005-09-01 00:00:00

abstract：:Five novel Nocardiopsis strains isolated from hypersaline soils in China were subjected to a polyphasic analysis to determine their taxonomic position. All of the novel isolates could grow on agar plates at NaCl concentrations of up to 18 % (w/v), with optimum growth at 5-8 %. The DNA G+C contents of the novel strains...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li WJ,Kroppenstedt RM,Wang D,Tang SK,Lee JC,Park DJ,Kim CJ,Xu LH,Jiang CL

更新日期：2006-05-01 00:00:00

abstract：:A novel actinomycete, designated strain NEAU-Ht49T, was isolated from sea sand sampled in Sanya and characterized by using a polyphasic approach. The 16S rRNA gene sequence analysis showed that strain NEAU-Ht49T was most closely related to Actinomadura rhizosphaerae SDA37T (98.8 %), Actinomadura logoneensis NEAU-G17T ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hu J,Han C,Yu B,Zhao J,Guo X,Shen Y,Wang X,Xiang W

更新日期：2020-02-01 00:00:00

abstract：:A strictly anaerobic, thermophilic bacterium, designated strain AeB(T), was isolated from microbial mats colonizing a run-off channel formed by free-flowing thermal water from a bore well (registered number 17263) of the Great Artesian Basin, Australia. Cells of strain AeB(T) were slightly curved rods (2.5-6.0x1.0 mum...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ogg CD,Patel BKC

更新日期：2010-06-01 00:00:00

abstract：:A novel bacterium with cells that were pinkish-cream-coloured, aerobic, rod-shaped, 0.62-1.00 µm wide and 2.3-3.3 µm long, designated as strain MEBiC09517T, was isolated from Buksung-Po, a small port in Incheon, Republic of Korea. Strain MEBiC09517T had low 16S rRNA gene sequence similarity to validly reported strains...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park MJ,Oh JH,Yang SH,Kwon KK

更新日期：2019-04-01 00:00:00

abstract：:The fluorescent amplified fragment length polymorphism (FAFLP) groups A5 (21 isolates), A8 (6 isolates) and A23 (3 isolates) distinguished in an earlier paper (Thompson et al., Syst Appl Microbiol 24, 520-538, 2001) were examined in more depth. These three groups were phylogenetically related to Vibrio tubiashii, but ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Thompson FL,Li Y,Gomez-Gil B,Thompson CC,Hoste B,Vandemeulebroecke K,Rupp GS,Pereira A,De Bem MM,Sorgeloos P,Swings J

更新日期：2003-01-01 00:00:00

abstract：:A pink-pigmented, aerobic, facultatively methylotrophic bacterium, strain BJ001T, was isolated from internal poplar tissues (Populus deltoidesxnigra DN34) and identified as a member of the genus Methylobacterium. Phylogenetic analyses showed that strain BJ001T is related to Methylobacterium thiocyanatum, Methylobacter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Van Aken B,Peres CM,Doty SL,Yoon JM,Schnoor JL

更新日期：2004-07-01 00:00:00

abstract：:A novel endophytic actinobacterium, designated strain YIM 67072(T), was isolated from healthy roots of Dysophylla stellata (Lour.) Benth. Cells of this aerobic, cream-yellow-coloured strain occurred singly, in pairs or in tetrads, were Gram-stain-positive and ovoid- to spherical-shaped. Strain YIM 67072(T) grew at 4-4...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xiong ZJ,Zhang JL,Zhang DF,Zhou ZL,Liu MJ,Zhu WY,Zhao LX,Xu LH,Li WJ

更新日期：2013-11-01 00:00:00

abstract：:A novel, strictly aerobic, Gram-negative, yellow-orange-pigmented, motile, catalase-positive, oxidase-negative bacterium, RW262(T), was isolated from water of the River Taff, Cardiff, UK, during January 2000. Phylogenetic analysis of the 16S rRNA gene indicated that strain RW262(T) was a member of the family Cryomorph...

journal_title：International journal of systematic and evolutionary microbiology

authors： O'Sullivan LA,Rinna J,Humphreys G,Weightman AJ,Fry JC

更新日期：2005-09-01 00:00:00

abstract：:A Gram-staining-negative, strictly aerobic, non-motile, yellow-pigmented bacterium, designated strain M091(T), was isolated from seawater at Damupo beach in Pohang, Republic of Korea, and investigated using a polyphasic taxonomic approach. The novel strain grew optimally at 25 °C, pH 7.0-8.0, and in the presence of 3%...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee DH,Cho SJ,Kim SM,Lee SB

更新日期：2012-07-01 00:00:00

abstract：:An aerobic, spore-forming, actinomycete, designated strain CHM3-46T, was isolated from soil in a hot spring pond located in Chiangmai province, Thailand. The strain exhibited taxonomic characteristics consistent with the genus Thermocatellispora. Strain CHM3-46T produced short, straight chains of warty spores on aeria...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duangupama T,Pittayakhajonwut P,Thawai C

更新日期：2019-01-01 00:00:00

abstract：:Several nocardioform actinomycetes were isolated from tufaceous surfaces with whitish-grey patinas in the catacombs of St Callistus in Rome, Italy. The morphology of the isolates and their chemotaxonomic characteristics such as LL-diaminopimelic acid in the cell-wall peptidoglycan, the major menaquinone of MK-9(H(4)),...

journal_title：International journal of systematic and evolutionary microbiology

authors： Urzì C,De Leo F,Schumann P

更新日期：2008-09-01 00:00:00

abstract：:Two novel siderophore-producing strains designated CC-CFT023(T) and CC-CFT034(T), isolated from a rusty iron plate, are characterized in this study. Cells of both strains were catalase- and oxidase-positive. Strain CC-CFT023(T) showed a high pairwise 16S rRNA gene sequence similarity to Aureimonas altamirensis LMG 233...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Hameed A,Liu YC,Hsu YH,Lai WA,Shen FT,Young LS,Tsai CF,Young CC

更新日期：2013-07-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, non-motile, rod-shaped actinobacterium, designated strain 21Sc5-5T, was isolated from a soil sample collected in the Taklamakan desert in Xinjiang Uygur Autonomous Region, PR China and investigated by using a polyphasic approach. Strain 21Sc5-5T grew at 10-37 °C (optimum, 28-30 °C), pH ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu SW,Xue CM,Li FN,Sun CH

更新日期：2020-01-01 00:00:00

abstract：:A novel extreme alkaliphile was isolated from a mine water containment dam at 3.2 km below land surface in an ultra-deep gold mine near Carletonville, South Africa. The cells of this bacterium were straight to slightly curved rods, motile by flagella and formed endospores. Growth was observed over the temperature rang...

journal_title：International journal of systematic and evolutionary microbiology

authors： Takai K,Moser DP,Onstott TC,Spoelstra N,Pfiffner SM,Dohnalkova A,Fredrickson JK

更新日期：2001-07-01 00:00:00

abstract：:Chironomids (Diptera; Chironomidae) are the most abundant insects in freshwater aquatic habitats. Females of the genus Chironomus lay egg masses containing hundreds of eggs embedded in a gelatinous matrix. A bacterial strain, designated T3944D(T), was isolated from a chironomid egg mass sampled from a waste-stabilizat...

journal_title：International journal of systematic and evolutionary microbiology

authors： Raats D,Halpern M

更新日期：2007-02-01 00:00:00

abstract：:Two bacterial strains, designated MA1002(T) and MA1003(T), were isolated from the air-conditioning system of a car. Cells of both strains were Gram-reaction-positive, non-motile, non-spore-forming coccoids, catalase- and oxidase-positive and UV-radiation resistant. The major fatty acids of strain MA1002(T) were iso-C1...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim DU,Lee H,Lee JH,Ahn JH,Lim S,Jeong S,Park SY,Seong CN,Ka JO

更新日期：2015-09-01 00:00:00

abstract：:A novel bacterium, designated strain Ruye-53(T), was isolated from a freshwater pond used to rear tilapiine cichlid fish in Taiwan. The taxonomic position of the novel strain was determined using a polyphasic approach. Strain Ruye-53(T) was Gram-reaction-negative, aerobic, cream-white coloured, rod-shaped, non-motile ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Sheu DS,Sheu FS,Chen WM

更新日期：2013-04-01 00:00:00

abstract：:A new lanthanide (Ln3+)-dependent methanol-utilizing bacterial strain, La3113T, was isolated from rice field soil and its taxonomic position was investigated using polyphasic approaches. The strain was aerobic, Gram-stain-negative, strongly motile, catalase-positive and cytochrome oxidase-positive. It could neither ca...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lv H,Sahin N,Tani A

更新日期：2020-04-01 00:00:00

abstract：:Strain KIT 00200-70066-1(T) was isolated from the sputum of a patient with pulmonary disease. Cells of the strain were Gram-variable, facultatively anaerobic, motile, spore-forming rods and formed colourless to white colonies on tryptic soy agar at 30 °C and pH 7. The pathogenicity of the strain is not k...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim KK,Lee KC,Yu H,Ryoo S,Park Y,Lee JS

更新日期：2010-10-01 00:00:00

abstract：:A seawater bacterium, designated IMCC3101(T), was isolated from Antarctic coastal seawater. The strain was Gram-negative, chemoheterotrophic, obligately aerobic, pigmented dark yellow (flexirubin-type pigments) and devoid of gliding and flagellar motility. On the basis of 16S rRNA gene sequence comparisons, the most c...

journal_title：International journal of systematic and evolutionary microbiology

authors： Choi TH,Lee HK,Lee K,Cho JC

更新日期：2007-12-01 00:00:00