Prevotella aurantiaca sp. nov., isolated from the human oral cavity.

Abstract:

:Two anaerobic, pigmented, non-spore-forming, Gram-stain-negative, rod-shaped strains isolated from the human oral cavity, OMA31(T) and OMA130, were characterized by determining their phenotypic and biochemical features, cellular fatty acid profiles and phylogenetic positions based on 16S rRNA gene sequence analysis. 16S rRNA gene sequence analysis showed that the new isolates belonged to a single species of the genus Prevotella. The two isolates showed 100 % 16S rRNA gene sequence similarity with each other and were most closely related to Prevotella intermedia ATCC 25611(T) with 96.4 % 16S rRNA gene sequence similarity; the next most closely related strains to the isolates were Prevotella pallens AHN 10371(T) (96.1 %) and Prevotella falsenii JCM 15124(T) (95.3 %). Phenotypic and biochemical characteristics of the isolates were the same as those of P. intermedia JCM 12248(T), P. falsenii JCM 15124(T) and Prevotella nigrescens JCM 12250(T). The isolates could be differentiated from P. pallens JCM 11140( T) by mannose fermentation and alpha-fucosidase activity. Conventional biochemical tests were unable to differentiate the new isolates from P. intermedia, P. falsenii and P. nigrescens. However, hsp60 gene sequence analysis suggested that strain OMA31(T) was not a representative of P. intermedia, P. pallens, P. falsenii or P. nigrescens. Based on these data, a novel species of the genus Prevotella, Prevotella aurantiaca sp. nov., is proposed, with OMA31(T) (=JCM 15754(T)=CCUG 57723(T)) as the type strain.

authors

Sakamoto M,Suzuki N,Okamoto M

doi

10.1099/ijs.0.012831-0

subject

Has Abstract

pub_date

2010-03-01 00:00:00

pages

500-503

issue

Pt 3

eissn

1466-5026

issn

1466-5034

journal_volume

60

pub_type

杂志文章
  • Tessaracoccus flavescens sp. nov., isolated from marine sediment.

    abstract::A novel actinobacterium, designated strain SST-39T, was isolated from a marine sediment sample collected in Jeju, Republic of Korea. Cells were facultatively anaerobic, Gram-positive, non-endospore-forming, non-motile rods. Colonies were circular, slightly convex, opaque and brilliant yellow. The cell-wall peptidoglyc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64868-0

    authors: Lee DW,Lee SD

    更新日期:2008-04-01 00:00:00

  • Construction of an interactive online phytoplasma classification tool, iPhyClassifier, and its application in analysis of the peach X-disease phytoplasma group (16SrIII).

    abstract::Phytoplasmas, the causal agents of numerous plant diseases, are insect-vector-transmitted, cell-wall-less bacteria descended from ancestral low-G+C-content Gram-positive bacteria in the Bacillus-Clostridium group. Despite their monophyletic origin, widely divergent phytoplasma lineages have evolved in adaptation to sp...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.010249-0

    authors: Zhao Y,Wei W,Lee IM,Shao J,Suo X,Davis RE

    更新日期:2009-10-01 00:00:00

  • Aureimonas glaciei sp. nov., isolated from an ice core.

    abstract::A bacterial strain, B5-2T, was isolated from an ice core drilled from Muztagh Glacier, China. Strain B5-2T was a Gram-stain-negative, short rod-shaped, motile by polar flagella, aerobic bacterium. The major fatty acids of strain B5-2T were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and iso-C13 : 0. The G+C conten...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001661

    authors: Guo B,Liu Y,Gu Z,Shen L,Liu K,Xing T,Wang N,Liu H,Zhou Y,Li J

    更新日期:2017-02-01 00:00:00

  • Streptomyces plumbiresistens sp. nov., a lead-resistant actinomycete isolated from lead-polluted soil in north-west China.

    abstract::The taxonomic position of an actinomycete isolated from a lead-polluted soil in Gansu province, north-west China, was determined by using a polyphasic approach. Chemical and morphological properties of the isolate, designated strain CCNWHX 13-160(T), were similar to those of streptomycetes. Analysis of the almost comp...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.004713-0

    authors: Guo JK,Lin YB,Zhao ML,Sun R,Wang TT,Tang M,Wei GH

    更新日期:2009-06-01 00:00:00

  • Saccharolobus caldissimus gen. nov., sp. nov., a facultatively anaerobic iron-reducing hyperthermophilic archaeon isolated from an acidic terrestrial hot spring, and reclassification of Sulfolobus solfataricus as Saccharolobus solfataricus comb. nov. and

    abstract::A novel hyperthermophilic archaeon of strain HS-3T, belonging to the family Sulfolobaceae, was isolated from an acidic terrestrial hot spring in Hakone Ohwaku-dani, Japan. Based on 16S rRNA gene sequence analysis, the closest phylogenetic relatives of strain HS-3T were, first, Sulfolobus solfataricus (96.4 %) and, sec...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002665

    authors: Sakai HD,Kurosawa N

    更新日期:2018-04-01 00:00:00

  • Mitsuokella jalaludinii sp. nov., from the rumens of cattle in Malaysia.

    abstract::Five strains of phytase-producing, gram-negative, non-spore-forming, non-motile, small, stout, rod-shaped, strictly anaerobic, fermentative bacteria were isolated from the rumens of cattle in Malaysia. All five strains had morphological, physiological and biochemical features in common. Although these strains had many...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-3-713

    authors: Lan GQ,Ho YW,Abdullah N

    更新日期:2002-05-01 00:00:00

  • Algoriphagus faecimaris sp. nov., isolated from coastal sediment.

    abstract::A Gram-negative, non-motile, non-sporulating bacterial strain, designated LYX05(T), was isolated from coastal sediment of Qingdao, China, on the coast of the Yellow Sea. Strain LYX05(T) was aerobic and heterotrophic. The strain grew optimally at 37 °C and pH 7.5 and in the presence of 2% (w/v) NaCl. Colonies were 1-2 ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.027862-0

    authors: Li Y,Yan S,Yang Q,Qi Z,Zhang XH,Fu YB

    更新日期:2011-12-01 00:00:00

  • An analysis of the term 'standing in nomenclature', as used in the International Code of Nomenclature of Prokaryotes.

    abstract::The term 'standing in nomenclature' is used in several instances in the International Code of Nomenclature of Prokaryotes, but the term is not defined. An analysis of the way the term has been used in the past and the context in which it is currently used indicates that it may be more appropriate to substitute the ter...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003191

    authors: Tindall BJ

    更新日期:2019-07-01 00:00:00

  • Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer.

    abstract::A novel methane-oxidizing bacterium, strain HTM55(T), was isolated from subsurface hot aquifer water from a Japanese gold mine. Strain HTM55(T) was a Gram-negative, aerobic, motile, coccoid bacterium with a single polar flagellum and the distinctive intracytoplasmic membrane arrangement of a type I methanotroph. Strai...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.028092-0

    authors: Hirayama H,Suzuki Y,Abe M,Miyazaki M,Makita H,Inagaki F,Uematsu K,Takai K

    更新日期:2011-11-01 00:00:00

  • Reclassification of Sphingobacterium antarcticum Shivaji et al. 1992 as Pedobacter antarcticus comb. nov. and Pedobacter piscium (Takeuchi and Yokota 1993) Steyn et al. 1998 as a later heterotypic synonym of Pedobacter antarcticus.

    abstract::The taxonomic position of Sphingobacterium antarcticum has been revised by means of 16S rRNA gene sequences, DNA-DNA hybridization, and phenotypic and chemotaxonomic characteristics. All data previously reported, as well as the results of the present phylogenetic analysis, support that Sphingobacterium antarcticum is ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.054965-0

    authors: Farfán M,Montes MJ,Marqués AM

    更新日期:2014-03-01 00:00:00

  • Gene sequences useful for predicting relatedness of whole genomes in bacteria.

    abstract::Thirty-two protein-encoding genes that are distributed widely among bacterial genomes were tested for the potential usefulness of their DNA sequences in assigning bacterial strains to species. From publicly available data, it was possible to make 49 pairwise comparisons of whole bacterial genomes that were related at ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02713-0

    authors: Zeigler DR

    更新日期:2003-11-01 00:00:00

  • Granulicella cerasi sp. nov., an acidophilic bacterium isolated from cherry bark.

    abstract::A novel acidobacterial strain, Sakura1(T), was isolated from pieces of cherry bark. Cells of strain Sakura1(T) were non-motile, rod-shaped and stained Gram-negative. This strictly aerobic isolate was mesophilic but was able to grow at temperatures as low as 10 °C. Colonies were pink due to production of carotenoids, a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.058636-0

    authors: Yamada K,Okuno Y,Meng XY,Tamaki H,Kamagata Y,Hanada S

    更新日期:2014-08-01 00:00:00

  • Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds.

    abstract::Five brightly red-pigmented, motile, rod-shaped, extremely halophilic bacteria were isolated from saltern crystallizer ponds in Alicante (two strains) and Mallorca (three strains), Spain. They grew optimally at salt concentrations between 20 and 30% and did not grow below 15% salts. Thus, these isolates are among the ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-2-485

    authors: Antón J,Oren A,Benlloch S,Rodríguez-Valera F,Amann R,Rosselló-Mora R

    更新日期:2002-03-01 00:00:00

  • Thalassospira lucentensis gen. nov., sp. nov., a new marine member of the alpha-Proteobacteria.

    abstract::A novel bacterium from the Mediterranean Sea was isolated under oligotrophic conditions at in situ temperature after prolonged continuous culture. The isolates were initially characterized by partial 16S rRNA gene sequencing. Similarity searches of one of the isolates, QMT2T, indicated high sequence identity to the we...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-4-1277

    authors: López-López A,Pujalte MJ,Benlloch S,Mata-Roig M,Rosselló-Mora R,Garay E,Rodríguez-Valera F

    更新日期:2002-07-01 00:00:00

  • Bensingtonia changbaiensis sp. nov. and Bensingtonia sorbi sp. nov., novel ballistoconidium-forming yeast species from plant leaves.

    abstract::Six ballistoconidium-forming yeast strains that were isolated from plant leaves collected on Changbai Mountain, north-east China, were assigned to the genus Bensingtonia Ingold emend. Nakase & Boekhout due to the formation of asymmetrical ballistoconidia, cream-coloured colonies and Q-9 as the major ubiquinone. Two se...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02736-0

    authors: Wang QM,Bai FY,Zhao JH,Jia JH

    更新日期:2003-11-01 00:00:00

  • Ornithinibacillus halophilus sp. nov., a moderately halophilic, Gram-stain-positive, endospore-forming bacterium from a hypersaline lake.

    abstract::A novel Gram-stain-positive, moderately halophilic bacterium, designated strain G8B(T), was isolated from water of the hypersaline lake Aran-Bidgol in Iran and characterized taxonomically using a polyphasic approach. Cells of strain G8B(T) were rod-shaped, motile and produced oval endospores at a terminal position in ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.041350-0

    authors: Bagheri M,Amoozegar MA,Schumann P,Didari M,Mehrshad M,Spröer C,Sánchez-Porro C,Ventosa A

    更新日期:2013-03-01 00:00:00

  • Sulfuriflexusmobilis gen. nov., sp. nov., a sulfur-oxidizing bacterium isolated from a brackish lake sediment.

    abstract::A chemolithotrophic sulfur-oxidizing bacterium, strain aks1T, was isolated from sediment of a brackish lake in Japan. The cells were curved rod-shaped and Gram-stain-negative. The G+C content of the genomic DNA was 53 mol%. The major components in the cellular fatty acid profile were C16 : 0 and summed feature 3 (C16 ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001227

    authors: Kojima H,Fukui M

    更新日期:2016-09-01 00:00:00

  • Streptimonospora salina gen. nov., sp. nov., a new member of the family Nocardiopsaceae.

    abstract::Actinomycete strain YIM 90002T (= CCTCC 99003T = CCRC 16284T) was isolated from a soil sample collected from a salt lake in the west of China. The aerial mycelium of this organism is well developed but not fragmented and, at maturity, forms short chains of spores. Spores in short chains are oval- to rod-shaped and hav...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-2-357

    authors: Cui XL,Mao PH,Zeng M,Li WJ,Zhang LP,Xu LH,Jiang CL

    更新日期:2001-03-01 00:00:00

  • Pedobacter terrae sp. nov., isolated from soil.

    abstract::A Gram-negative, non-motile, rod-shaped bacterial strain, DS-57T, was isolated from soil from Dokdo, Korea, and its taxonomic position was investigated using a polyphasic approach. It grew optimally at 25 degrees C and in trypticase soy broth without NaCl and trypticase soy broth with 0.5% NaCl. Strain DS-57T containe...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64727-0

    authors: Yoon JH,Kang SJ,Oh TK

    更新日期:2007-11-01 00:00:00

  • Flavobacterium chungangense sp. nov., isolated from a freshwater lake.

    abstract::A yellow-pigmented, rod-shaped, Gram-staining-negative, aerobic bacterial strain, designated CJ7(T), was isolated from a freshwater lake at Chung-Ang University in Anseong, South Korea. Results from 16S rRNA gene sequence analysis revealed that the isolate was phylogenetically affiliated with members of the genus Flav...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.007955-0

    authors: Kim JH,Kim KY,Cha CJ

    更新日期:2009-07-01 00:00:00

  • Sphingomonas soli sp. nov., a beta-glucosidase-producing bacterium in the family Sphingomonadaceae in the alpha-4 subgroup of the Proteobacteria.

    abstract::Strain T5-04T, a Gram-negative, non-spore-forming, rod-shaped bacterium, was isolated from soil of a ginseng field in South Korea and characterized in order to determine its taxonomic position. 16S rRNA gene sequence analysis revealed that strain T5-04T belongs to the alpha-4 subgroup of the Proteobacteria, and the hi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63839-0

    authors: Yang DC,Im WT,Kim MK,Ohta H,Lee ST

    更新日期:2006-04-01 00:00:00

  • Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoides x nigra DN34).

    abstract::A pink-pigmented, aerobic, facultatively methylotrophic bacterium, strain BJ001T, was isolated from internal poplar tissues (Populus deltoidesxnigra DN34) and identified as a member of the genus Methylobacterium. Phylogenetic analyses showed that strain BJ001T is related to Methylobacterium thiocyanatum, Methylobacter...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02796-0

    authors: Van Aken B,Peres CM,Doty SL,Yoon JM,Schnoor JL

    更新日期:2004-07-01 00:00:00

  • Pseudoxanthomonas yeongjuensis sp. nov., isolated from soil cultivated with Korean ginseng.

    abstract::A Gram-negative, strictly aerobic, non-spore-forming bacterium, motile by means of single polar flagellum and rod-shaped, designated strain GR12-1(T), was isolated from soil of a ginseng field in Yeongju region, Korea. Phylogenetic analysis based on 16S rRNA gene sequences indicated that this strain is related to memb...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64427-0

    authors: Yoo SH,Weon HY,Kim BY,Kim JH,Baek YK,Kwon SW,Go SJ,Stackebrandt E

    更新日期:2007-03-01 00:00:00

  • Phylogenetic relationships amongst tetrahymenine ciliates inferred by a comparison of telomerase RNAs.

    abstract::The phylogenetic relationships between ciliate species in the suborder Tetrahymenina, order Hymenostomata, was investigated by comparing their telomerase RNA (TER) sequences. This relatively small RNA is an integral part of telomerase, the ribonucleoprotein enzyme that catalyses the synthesis of telomeric DNA. Despite...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-6-2297

    authors: Ye AJ,Romero DP

    更新日期:2002-11-01 00:00:00

  • Systematic position of Discocephalus-like ciliates (Ciliophora: Spirotrichea) inferred from SSU rDNA and ontogenetic information.

    abstract::The Prodiscocephalus-like ciliates, or discocephalines, are cephalized organisms that are traditionally considered to be hypotrichs (sensu lato) but whose precise systematic position has long been uncertain. The main reasons for this are that these organisms exhibit several intermediate morphological and morphogenetic...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65781-0

    authors: Shao C,Song W,Li L,Warren A,Al-Rasheid KA,Al-Quraishy SA,Al-Farraj SA,Lin X

    更新日期:2008-12-01 00:00:00

  • Photobacterium aquimaris sp. nov., a luminous marine bacterium isolated from seawater.

    abstract::Two luminous marine bacteria, strains LC2-065(T) and LC2-102, were isolated from seawater at Sagami Bay in Japan. These bacteria were Gram-negative, oxidase-negative, catalase-positive, motile and coccoid-rods. 16S rRNA gene sequence analysis and multilocus sequence analysis (MLSA) using six loci (ftsZ, gapA, gyrB, mr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.004309-0

    authors: Yoshizawa S,Wada M,Kita-Tsukamoto K,Yokota A,Kogure K

    更新日期:2009-06-01 00:00:00

  • Marininema mesophilum gen. nov., sp. nov., a thermoactinomycete isolated from deep sea sediment, and emended description of the family Thermoactinomycetaceae.

    abstract::A novel filamentous bacterium, strain SCSIO 10219(T), was isolated from a sediment sample collected from the South China Sea (113° 3.752' E 18° 1.722' N) at a depth of 2105 m. Growth was observed at 25-35 °C (optimum 30 °C) and pH 5.0-8.0 (optimum pH 6.0-7.0). The organism formed yellow-white colonies with radial wrin...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.035071-0

    authors: Li J,Zhang GT,Yang J,Tian XP,Wang FZ,Zhang CS,Zhang S,Li WJ

    更新日期:2012-06-01 00:00:00

  • Terrabacter aerolatus sp. nov., isolated from an air sample.

    abstract::A Gram-positive, strictly aerobic, motile, rod- or coccoid-shaped bacterium, strain 5516J-36(T), was isolated from an air sample from Jeju region, Korea, and its taxonomic position was investigated by a polyphasic approach. The organism grew optimally at 30 degrees C and pH 7.0-8.0. Comparative 16S rRNA gene sequencin...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65040-0

    authors: Weon HY,Schumann P,Kroppenstedt RM,Kim BY,Song J,Kwon SW,Go SJ,Stackebrandt E

    更新日期:2007-09-01 00:00:00

  • Crossiella gen. nov., a new genus related to Streptoalloteichus.

    abstract::Phylogenetic analysis of the genera within the suborder Pseudonocardineae based on almost complete sequences of 16S rDNA showed that Saccharothrix cryophilis NRRL B-16238T was misplaced within the genus Saccharothrix. Saccharothrix cryophilis NRRL B-16238T appeared to be phylogenetically closest to Streptoalloteichus,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-4-1575

    authors: Labeda DP

    更新日期:2001-07-01 00:00:00

  • Methylotenera oryzisoli sp. nov., a lanthanide-dependent methylotrophic bacteria isolated from rice field soil.

    abstract::A new lanthanide (Ln3+)-dependent methanol-utilizing bacterial strain, La3113T, was isolated from rice field soil and its taxonomic position was investigated using polyphasic approaches. The strain was aerobic, Gram-stain-negative, strongly motile, catalase-positive and cytochrome oxidase-positive. It could neither ca...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004098

    authors: Lv H,Sahin N,Tani A

    更新日期:2020-04-01 00:00:00