Investigating tree and fruit growth through functional-structural modelling: implications of carbon autonomy at different scales.

Abstract:

BACKGROUND AND AIMS:Many experimental studies assume that some topological units are autonomous with regard to carbon because it is convenient. Some plant models simulate carbon allocation, employing complex approaches that require calibration and fitted parameters. For whole-tree canopy simulations, simpler carbon allocation models can provide useful insights. METHODS:We propose a new method for simulating carbon allocation in the whole tree canopy considering various scales of carbon autonomy, i.e. branchlets, branches, limbs, and no autonomy. This method was implemented in a functional-structural plant model of growth of individual organs for studying macadamia tree growth during one growing season. KEY RESULTS:This model allows the simulation of various scales of carbon autonomy in a simple tree canopy, showing organ within-tree variability according to the scale of autonomy. Using a real tree canopy, we observed differences in growth variability within the tree and in tree growth, with several scales of carbon autonomy. The simulations that assumed autonomy at branch scale, i.e. 2-year-old wood, showed the most realistic results. CONCLUSIONS:Simulations using this model were employed to investigate and explain aspects of differences in carbon autonomy between trees, organ growth variability, competition between shoot and fruit growth, and time of autonomy.

journal_name

Ann Bot

journal_title

Annals of botany

authors

Auzmendi I,Hanan JS

doi

10.1093/aob/mcaa098

subject

Has Abstract

pub_date

2020-09-14 00:00:00

pages

775-788

issue

4

eissn

0305-7364

issn

1095-8290

pii

5841171

journal_volume

126

pub_type

杂志文章
  • High SNP diversity in the non-toxic indigenous Jatropha curcas germplasm widens the potential of this upcoming major biofuel crop species.

    abstract:BACKGROUND AND AIMS:Jatropha curcas (jatropha) is an oil crop cultivated in (sub)tropical regions around the world, and holds great promise as a renewable energy source. However, efforts to fully commercialize jatropha are currently hampered by the lack of genetic diversity in the extant breeding germplasm, and by the ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcz008

    authors: Vandepitte K,Valdés-Rodríquez OA,Sánchez-Sánchez O,De Kort H,Martinez-Herrera J,García-Pérez E,De Meyer T,Pérez-Vázquez A,Muys B,Honnay O

    更新日期:2019-10-29 00:00:00

  • The evolutionary history of sea barley (Hordeum marinum) revealed by comparative physical mapping of repetitive DNA.

    abstract:BACKGROUND AND AIMS:Hordeum marinum is a species complex that includes the diploid subspecies marinum and both diploid and tetraploid forms of gussoneanum. Their relationships, the rank of the taxa and the origin of the polyploid forms remain points of debate. The present work reports a comparative karyotype analysis o...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mct245

    authors: Carmona A,Friero E,de Bustos A,Jouve N,Cuadrado A

    更新日期:2013-12-01 00:00:00

  • Root signals and stomatal closure in relation to photosynthesis, chlorophyll a fluorescence and adventitious rooting of flooded tomato plants.

    abstract:BACKGROUND AND AIMS:An investigation was carried out to determine whether stomatal closure in flooded tomato plants (Solanum lycopersicum) results from decreased leaf water potentials (psi(L)), decreased photosynthetic capacity and attendant increases in internal CO(2) (C(i)) or from losses of root function such as cyt...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcn208

    authors: Else MA,Janowiak F,Atkinson CJ,Jackson MB

    更新日期:2009-01-01 00:00:00

  • How many genes are needed to make a pollen tube? Lessons from transcriptomics.

    abstract:BACKGROUND:Pollen is the male gametophyte of higher plants. Upon pollination, it germinates and develops into a fast-growing cytoplasmic extension, the pollen tube, which ultimately delivers the sperm into the ovary. The biological relevance of its role, and the uniqueness of this kind of cellular organization, have ma...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm208

    authors: Becker JD,Feijó JA

    更新日期:2007-12-01 00:00:00

  • Molecular mechanisms governing differential robustness of development and environmental responses in plants.

    abstract:BACKGROUND:Robustness to genetic and environmental perturbation is a salient feature of multicellular organisms. Loss of developmental robustness can lead to severe phenotypic defects and fitness loss. However, perfect robustness, i.e. no variation at all, is evolutionarily unfit as organisms must be able to change phe...

    journal_title:Annals of botany

    pub_type: 杂志文章,评审

    doi:10.1093/aob/mcv151

    authors: Lachowiec J,Queitsch C,Kliebenstein DJ

    更新日期:2016-04-01 00:00:00

  • Genetic diversity in Nothofagus alessandrii (Fagaceae), an endangered endemic tree species of the coastal maulino forest of Central Chile.

    abstract:BACKGROUND AND AIMS:The endemic tree Nothofagus alessandrii (Fagaceae) has been historically restricted to the coastal range of Region VII of central Chile, and its forests have been increasingly destroyed and fragmented since the end of the 19th century. In this study, the patterns of within- and among-population gene...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm073

    authors: Torres-Díaz C,Ruiz E,González F,Fuentes G,Cavieres LA

    更新日期:2007-07-01 00:00:00

  • Plant nutriomics in China: an overview.

    abstract:BACKGROUND:Population and environmental pressure have imposed a great challenge on agriculture in China to explore innovative and effective solutions to its pressing plant nutritional problems. Plant nutriomics is a new frontier in plant biology that can provide innovative solutions for improving plant nutrient efficie...

    journal_title:Annals of botany

    pub_type: 杂志文章,评审

    doi:10.1093/aob/mcl116

    authors: Yan X,Wu P,Ling H,Xu G,Xu F,Zhang Q

    更新日期:2006-09-01 00:00:00

  • Contributions of leaf photosynthetic capacity, leaf angle and self-shading to the maximization of net photosynthesis in Acer saccharum: a modelling assessment.

    abstract:BACKGROUND AND AIMS:Plants are expected to maximize their net photosynthetic gains and efficiently use available resources, but the fundamental principles governing trade-offs in suites of traits related to resource-use optimization remain uncertain. This study investigated whether Acer saccharum (sugar maple) saplings...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs106

    authors: Posada JM,Sievänen R,Messier C,Perttunen J,Nikinmaa E,Lechowicz MJ

    更新日期:2012-08-01 00:00:00

  • The effects of large herbivores on the landscape dynamics of a perennial herb.

    abstract:BACKGROUND AND AIMS:Models assessing the prospects of plant species at the landscape level often focus primarily on the relationship between species dynamics and landscape structure. However, the short-term prospects of species with slow responses to landscape changes depend on the factors affecting local population dy...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs064

    authors: Hemrová L,Cervenková Z,Münzbergová Z

    更新日期:2012-11-01 00:00:00

  • Mathematical model of fructan biosynthesis and polymer length distribution in plants.

    abstract:BACKGROUND AND AIMS:There are many unresolved issues concerning the biochemistry of fructan biosynthesis. The aim of this paper is to address some of these by means of modelling mathematically the biochemical processes. METHODS:A model has been constructed for the step-by-step synthesis of fructan polymers. This is ru...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mct087

    authors: Rasmussen S,Thornley JH,Parsons AJ,Harrison SJ

    更新日期:2013-06-01 00:00:00

  • Multiple origins of the determinate growth habit in domesticated common bean (Phaseolus vulgaris).

    abstract:BACKGROUND AND AIMS:The actual number of domestications of a crop is one of the key questions in domestication studies. Answers to this question have generally been based on relationships between wild progenitors and domesticated descendants determined with anonymous molecular markers. In this study, this question was ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs207

    authors: Kwak M,Toro O,Debouck DG,Gepts P

    更新日期:2012-12-01 00:00:00

  • Large- and small-scale environmental factors drive distributions of cool-adapted plants in karstic microrefugia.

    abstract:BACKGROUND AND AIMS:Dolines are small- to large-sized bowl-shaped depressions of karst surfaces. They may constitute important microrefugia, as thermal inversion often maintains cooler conditions within them. This study aimed to identify the effects of large- (macroclimate) and small-scale (slope aspect and vegetation ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcw233

    authors: Bátori Z,Vojtkó A,Farkas T,Szabó A,Havadtői K,Vojtkó AE,Tölgyesi C,Cseh V,Erdős L,Maák IE,Keppel G

    更新日期:2017-01-01 00:00:00

  • Physical constraints on temperature difference in some thermogenic aroid inflorescences.

    abstract:BACKGROUNDS AND AIMS:Thermogenesis in reproductive organs is known from several plant families, including the Araceae. A study was made of the relationship between temperature increase and spadix size in the subfamily Aroideae in order to determine whether the quantitative variation of heat production among species and...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mci157

    authors: Gibernau M,Barabé D,Moisson M,Trombe A

    更新日期:2005-07-01 00:00:00

  • Cytogenetic and molecular evidence suggest multiple origins and geographical parthenogenesis in Nothoscordum gracile (Alliaceae).

    abstract:BACKGROUND AND AIMS:Nothoscordum gracile is an apomitic tetraploid widely distributed throughout the Americas and naturalized in many temperate regions of other continents. It has been suggested to form a species complex with sexual and apomictic N. nudicaule and N. macrostemon. Tetraploids of these species also share ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs020

    authors: Souza LG,Crosa O,Speranza P,Guerra M

    更新日期:2012-04-01 00:00:00

  • Low levels of pyrophosphate in transgenic potato plants expressing E. coli pyrophosphatase lead to decreased vitality under oxygen deficiency.

    abstract:BACKGROUND AND AIMS:The aim of this study was to investigate the importance of pyrophosphate (PPi) for plant metabolism and survival under low oxygen stress. Responses of roots of wild-type potato plants were compared with roots of transgenic plants containing decreased amounts of PPi as a result of the constitutive ex...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mci223

    authors: Mustroph A,Albrecht G,Hajirezaei M,Grimm B,Biemelt S

    更新日期:2005-09-01 00:00:00

  • Regulation of tillering in sorghum: environmental effects.

    abstract:BACKGROUND AND AIMS:Tillering has a significant effect on canopy development and, hence, on resource capture, crop growth and grain yield in sorghum. However, the physiological basis of tillering and its regulation by environmental effects are not fully understood. The objective of this study was to understand and quan...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcq079

    authors: Kim HK,van Oosterom E,Dingkuhn M,Luquet D,Hammer G

    更新日期:2010-07-01 00:00:00

  • An organismal concept for Sengelia radicans gen. et sp. nov. - morphology and natural history of an Early Devonian lycophyte.

    abstract:Background and Aims:Fossil plants are found as fragmentary remains and understanding them as natural species requires assembly of whole-organism concepts that integrate different plant parts. Such concepts are essential for incorporating fossils in hypotheses of plant evolution and phylogeny. Plants of the Early Devoni...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcw277

    authors: Matsunaga KKS,Tomescu AMF

    更新日期:2017-05-01 00:00:00

  • Insights into a hydration regulating system in Cupressus pollen grains.

    abstract:BACKGROUND AND AIMS:Hydration, rupture and exine opening due to the sudden and large expansion of intine are typical of taxoid-type pollen grains. A hemispheric outgrowth external to the exine was observed on Cupressus and Juniperus pollen grains before the intine swelling and exine release. However, the actual existen...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcr144

    authors: Danti R,Della Rocca G,Calamassi R,Mori B,Mariotti Lippi M

    更新日期:2011-08-01 00:00:00

  • Hybridization drives evolution of apomicts in Rubus subgenus Rubus: evidence from microsatellite markers.

    abstract:Background and Aims:Rubus subgenus Rubus is a group of mostly apomictic and polyploid species with a complicated taxonomy and history of ongoing hybridization. The only polyploid series with prevailing sexuality is the series Glandulosi , although the apomictic series Discolores and Radula also retain a high degree of ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcx033

    authors: Šarhanová P,Sharbel TF,Sochor M,Vašut RJ,Dancák M,Trávnícek B

    更新日期:2017-08-01 00:00:00

  • Stem gravitropism and tension wood formation in Acacia mangium seedlings inclined at various angles.

    abstract:Background and Aims:In response to a gravitational stimulus, angiosperm trees generally form tension wood on the upper sides of leaning stems in order to reorientate the stems in the vertical direction. It is unclear whether the angle of inclination from the vertical affects tension wood formation. This study was desig...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcy056

    authors: Nugroho WD,Nakaba S,Yamagishi Y,Begum S,Rahman MH,Kudo K,Marsoem SN,Funada R

    更新日期:2018-06-28 00:00:00

  • Floral micromorphology of the bird-pollinated carnivorous plant species Utricularia menziesii R.Br. (Lentibulariaceae).

    abstract:Background and Aims:Bird pollination is rare among species in the genus Utricularia, and has evolved independently in two lineages of this genus. In Western Australia, the Western Spinebill, Acanthorhynchus superciliosus, visits flowers of Utricularia menziesii (section Pleiochasia: subgenus Polypompholyx). This study ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcy163

    authors: Plachno BJ,Stpiczynska M,Swiatek P,Lambers H,Miranda VFO,Nge FJ,Stolarczyk P,Cawthray GR

    更新日期:2019-01-01 00:00:00

  • Assessing radiation dose limits for X-ray fluorescence microscopy analysis of plant specimens.

    abstract:BACKGROUND AND AIMS:X-ray fluorescence microscopy (XFM) is a powerful technique to elucidate the distribution of elements within plants. However, accumulated radiation exposure during analysis can lead to structural damage and experimental artefacts including elemental redistribution. To date, acceptable dose limits ha...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcz195

    authors: Jones MWM,Kopittke PM,Casey L,Reinhardt J,Blamey FPC,van der Ent A

    更新日期:2020-03-29 00:00:00

  • Use or abuse of bioinformatic tools: a response to Samach.

    abstract::In a recent paper, we described for the first time the effects of fruit on the expression of putative homologues of genes involved in flowering pathways. It was our aim to provide insight into the molecular mechanisms underlying alternate bearing in citrus. However, a bioinformatics-based critique of our and other rel...

    journal_title:Annals of botany

    pub_type: 评论,杂志文章

    doi:10.1093/aob/mct020

    authors: Muñoz-Fambuena N,Mesejo C,González-Mas MC,Primo-Millo E,Agustí M,Iglesias DJ

    更新日期:2013-03-01 00:00:00

  • Temperate rain forest species partition fine-scale gradients in light availability based on their leaf mass per area (LMA).

    abstract:BACKGROUND AND AIMS:Ecologists are increasingly using plant functional traits to predict community assembly, but few studies have linked functional traits to species' responses to fine-scale resource gradients. In this study, it was tested whether saplings of woody species partition fine-scale gradients in light availa...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcw184

    authors: Fajardo A,Siefert A

    更新日期:2016-12-01 00:00:00

  • The influence of phosphorus deficiency on growth and nitrogen fixation of white clover plants.

    abstract::The effects of P deficiency on growth, N(2)-fixation and photosynthesis in white clover (Trifolium repens L.) plants were investigated using three contrasting relative addition rates of P, or following abrupt withdrawal of the P supply. Responses to a constant below-optimum P supply rate consisted of a decline in N(2)...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcf260

    authors: Høgh-Jensen H,Schjoerring J,Soussana JF

    更新日期:2002-12-01 00:00:00

  • Ecology of achene dimorphism in Leontodon saxatilis.

    abstract:BACKGROUND AND AIMS:[corrected] Leontodon saxatilis produces two morphologically distinct achenes (morphs) in a single capitulum: one row of dark brown achenes without a pappus lies at the edge ('peripheral achenes'; 0.74 +/- 0.18 mg) while the inner ones are light brown with a pappus ('central achenes'; 0.38 +/- 0.07 ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm214

    authors: Brändel M

    更新日期:2007-12-01 00:00:00

  • Association between border cell responses and localized root infection by pathogenic Aphanomyces euteiches.

    abstract:BACKGROUND AND AIMS:The oomycete Aphanomyces euteiches causes up to 80 % crop loss in pea (Pisum sativum). Aphanomyces euteiches invades the root system leading to a complete arrest of root growth and ultimately to plant death. To date, disease control measures are limited to crop rotation and no resistant pea lines ar...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcr177

    authors: Cannesan MA,Gangneux C,Lanoue A,Giron D,Laval K,Hawes M,Driouich A,Vicré-Gibouin M

    更新日期:2011-09-01 00:00:00

  • Fine-scale clonal structure and diversity within patches of a clone-forming dioecious shrub, Ilex leucoclada (Aquifoliaceae).

    abstract:BACKGROUND AND AIMS:The mode of reproduction (sexual vs. asexual) is likely to have important effects on genetic variation and its spatial distribution within plant populations. An investigation was undertaken of fine-scale clonal structure and diversity within patches of Ilex leucoclada (a clone-forming dioecious shru...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mci025

    authors: Torimaru T,Tomaru N

    更新日期:2005-01-01 00:00:00

  • The possible involvement of root-cap mucilage in gravitropism and calcium movement across root tips of Allium cepa L.

    abstract::Roots of Allium cepa L. grown in aerated water elongate rapidly, but are not graviresponsive. These roots (1) possess extensive columella tissues comprised of cells containing numerous sedimented amyloplasts, (2) lack mucilage on their tips, and (3) are characterized by a weakly polar movement of calcium (Ca) across ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.aob.a087216

    authors: Moore R,Fondren WM

    更新日期:1986-01-01 00:00:00

  • Differences in growth characteristics and dynamics of elements absorbed in seedlings of three spruce species raised on serpentine soil in northern Japan.

    abstract:BACKGROUND AND AIMS:Serpentine soils are characterized by the presence of heavy metals (Ni and Cr) and excess Mg; these elements often suppress plant growth. Picea glehnii is nevertheless distributed widely on serpentine soils in northern Japan. Growth characteristics were compared among P. glehnii, Picea jezoensis (di...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mci063

    authors: Kayama M,Quoreshi AM,Uemura S,Koike T

    更新日期:2005-03-01 00:00:00