Molecular mechanisms governing differential robustness of development and environmental responses in plants.

Abstract:

BACKGROUND:Robustness to genetic and environmental perturbation is a salient feature of multicellular organisms. Loss of developmental robustness can lead to severe phenotypic defects and fitness loss. However, perfect robustness, i.e. no variation at all, is evolutionarily unfit as organisms must be able to change phenotype to properly respond to changing environments and biotic challenges. Plasticity is the ability to adjust phenotypes predictably in response to specific environmental stimuli, which can be considered a transient shift allowing an organism to move from one robust phenotypic state to another. Plants, as sessile organisms that undergo continuous development, are particularly dependent on an exquisite fine-tuning of the processes that balance robustness and plasticity to maximize fitness. SCOPE AND CONCLUSIONS:This paper reviews recently identified mechanisms, both systems-level and molecular, that modulate robustness, and discusses their implications for the optimization of plant fitness. Robustness in living systems arises from the structure of genetic networks, the specific molecular functions of the underlying genes, and their interactions. This very same network responsible for the robustness of specific developmental states also has to be built such that it enables plastic yet robust shifts in response to environmental changes. In plants, the interactions and functions of signal transduction pathways activated by phytohormones and the tendency for plants to tolerate whole-genome duplications, tandem gene duplication and hybridization are emerging as major regulators of robustness in development. Despite their obvious implications for plant evolution and plant breeding, the mechanistic underpinnings by which plants modulate precise levels of robustness, plasticity and evolvability in networks controlling different phenotypes are under-studied.

journal_name

Ann Bot

journal_title

Annals of botany

authors

Lachowiec J,Queitsch C,Kliebenstein DJ

doi

10.1093/aob/mcv151

subject

Has Abstract

pub_date

2016-04-01 00:00:00

pages

795-809

issue

5

eissn

0305-7364

issn

1095-8290

pii

mcv151

journal_volume

117

pub_type

杂志文章,评审
  • The use of internal nitrogen stores in the rhizomatous grass Calamagrostis epigejos during regrowth after defoliation.

    abstract:BACKGROUND AND AIMS:The regrowth dynamics after defoliation of the invasive grass Calamagrostis epigejos were studied. As nitrogen (N) reserves have been shown to play an important role during plant regrowth, the identity, location and relative importance for regrowth of N stores were determined in this rhizomatous gra...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mci054

    authors: Kavanová M,Gloser V

    更新日期:2005-02-01 00:00:00

  • Development of a local size hierarchy causes regular spacing of trees in an even-aged Abies forest: analyses using spatial autocorrelation and the mark correlation function.

    abstract:BACKGROUND AND AIMS:During the development of an even-aged plant population, the spatial distribution of individuals often changes from a clumped pattern to a random or regular one. The development of local size hierarchies in an Abies forest was analysed for a period of 47 years following a large disturbance in 1959. ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcn113

    authors: Suzuki SN,Kachi N,Suzuki J

    更新日期:2008-09-01 00:00:00

  • Rates of root and organism growth, soil conditions, and temporal and spatial development of the rhizosphere.

    abstract:BACKGROUND:Roots growing in soil encounter physical, chemical and biological environments that influence their rhizospheres and affect plant growth. Exudates from roots can stimulate or inhibit soil organisms that may release nutrients, infect the root, or modify plant growth via signals. These rhizosphere processes ar...

    journal_title:Annals of botany

    pub_type: 杂志文章,评审

    doi:10.1093/aob/mcl028

    authors: Watt M,Silk WK,Passioura JB

    更新日期:2006-05-01 00:00:00

  • Analysing growth and development of plants jointly using developmental growth stages.

    abstract:BACKGROUND AND AIMS:Plant growth, the increase of organ dimensions over time, and development, the change in plant structure, are often studied as two separate processes. However, there is structural and functional evidence that these two processes are strongly related. The aim of this study was to investigate the co-o...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcu227

    authors: Dambreville A,Lauri PÉ,Normand F,Guédon Y

    更新日期:2015-01-01 00:00:00

  • Mating system shifts on the trailing edge.

    abstract:BACKGROUND:The trailing edges of species ranges are becoming a subject of increasing interest as the environment changes due to global warming. Trailing edge populations are likely to face extinction because of a decline in numbers and an inability to evolve new adaptations with sufficient speed. Discussions of charact...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcr159

    authors: Levin DA

    更新日期:2012-02-01 00:00:00

  • Differential regulatory role of nitric oxide in mediating nitrate reductase activity in roots of tomato (Solanum lycocarpum).

    abstract:BACKGROUND AND AIMS:Nitric oxide (NO) has been demonstrated to stimulate the activity of nitrate reductase (NR) in plant roots supplied with a low level of nitrate, and to affect proteins differently, depending on the ratio of NO to the level of protein. Nitrate has been suggested to regulate the level of NO in plants....

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcp087

    authors: Jin CW,Du ST,Zhang YS,Lin XY,Tang CX

    更新日期:2009-07-01 00:00:00

  • Intraspecific variation in the magnitude and pattern of flooding-induced shoot elongation in Rumex palustris.

    abstract:BACKGROUND AND AIMS:Intraspecific variation in flooding tolerance is the basic pre-condition for adaptive flooding tolerance to evolve, and flooding-induced shoot elongation is an important trait that enables plants to survive shallow, prolonged flooding. Here an investigation was conducted to determine to what extent ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcp198

    authors: Chen X,Huber H,de Kroon H,Peeters AJ,Poorter H,Voesenek LA,Visser EJ

    更新日期:2009-11-01 00:00:00

  • GPT2: a glucose 6-phosphate/phosphate translocator with a novel role in the regulation of sugar signalling during seedling development.

    abstract:BACKGROUND AND AIMS:GPT2, a glucose 6-phosphate/phosphate translocator, plays an important role in environmental sensing in mature leaves of Arabidopsis thaliana. Its expression has also been detected in arabidopsis seeds and seedlings. In order to examine the role of this protein early in development, germination and ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mct298

    authors: Dyson BC,Webster RE,Johnson GN

    更新日期:2014-03-01 00:00:00

  • Effects of temporal heterogeneity of water supply on the growth of Perilla frutescens depend on plant density.

    abstract:BACKGROUND AND AIMS:Plants respond to the spatial and temporal heterogeneity of a resource supply. However, their responses will depend on intraspecific competition for resource acquisition. Although plants are subject to various intensities of intraspecific competition, most studies of resource heterogeneity have been...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcq096

    authors: Hagiwara Y,Kachi N,Suzuki J

    更新日期:2010-07-01 00:00:00

  • Genome size variation at constant chromosome number is not correlated with repetitive DNA dynamism in Anacyclus (Asteraceae).

    abstract:BACKGROUND AND AIMS:Changes in the amount of repetitive DNA (dispersed and tandem repeats) are considered the main contributors to genome size variation across plant species in the absence of polyploidy. However, the study of repeatome dynamism in groups showing contrasting genomic features and complex evolutionary his...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcz183

    authors: Vitales D,Álvarez I,Garcia S,Hidalgo O,Nieto Feliner G,Pellicer J,Vallès J,Garnatje T

    更新日期:2020-03-29 00:00:00

  • Flowering phenology and wind-pollination efficacy of heterodichogamous Juglans mandshurica (Juglandaceae).

    abstract:BACKGROUND AND AIMS:Heterodichogamy differs from normal dichogamy, in that it involves two mating types (protogyny and protandry) that occur at a 1 : 1 ratio in a population. Flowering phases of the two mating types are synchronized and reciprocal, which was considered to ensure between-type outcrossing. This study aim...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl111

    authors: Bai WN,Zeng YF,Liao WJ,Zhang DY

    更新日期:2006-08-01 00:00:00

  • Peter Barlow's insights and contributions to the study of tidal gravity variations and ultra-weak light emissions in plants.

    abstract:Background:A brief review is given of Peter W. Barlows' contributions to research on gravity tide-related phenomena in plant biology, or 'selenonastic' effects as he called them, including his early research on root growth. Also, new results are presented here from long-term recordings of spontaneous ultra-weak light e...

    journal_title:Annals of botany

    pub_type: 传,历史文章,杂志文章

    doi:10.1093/aob/mcx176

    authors: Gallep CM,Viana JF,Cifra M,Clarke D,Robert D

    更新日期:2018-11-03 00:00:00

  • Temperate rain forest species partition fine-scale gradients in light availability based on their leaf mass per area (LMA).

    abstract:BACKGROUND AND AIMS:Ecologists are increasingly using plant functional traits to predict community assembly, but few studies have linked functional traits to species' responses to fine-scale resource gradients. In this study, it was tested whether saplings of woody species partition fine-scale gradients in light availa...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcw184

    authors: Fajardo A,Siefert A

    更新日期:2016-12-01 00:00:00

  • Investigating tree and fruit growth through functional-structural modelling: implications of carbon autonomy at different scales.

    abstract:BACKGROUND AND AIMS:Many experimental studies assume that some topological units are autonomous with regard to carbon because it is convenient. Some plant models simulate carbon allocation, employing complex approaches that require calibration and fitted parameters. For whole-tree canopy simulations, simpler carbon all...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcaa098

    authors: Auzmendi I,Hanan JS

    更新日期:2020-09-14 00:00:00

  • trnL-F is a powerful marker for DNA identification of field vittarioid gametophytes (Pteridaceae).

    abstract:BACKGROUND AND AIMS:The gametophyte phase of ferns plays an important role in habitat selection, dispersal, adaptation and evolution. However, ecological studies on fern gametophytes have been impeded due to the difficulty of species identification of free-living gametophytes. DNA barcoding provides an alternative appr...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mct004

    authors: Chen CW,Huang YM,Kuo LY,Nguyen QD,Luu HT,Callado JR,Farrar DR,Chiou WL

    更新日期:2013-04-01 00:00:00

  • Ethylene modulates root cortical senescence in barley.

    abstract:Background and Aims:Root cortical senescence (RCS) is a poorly understood phenomenon with implications for adaptation to edaphic stress. It was hypothesized that RCS in barley (Hordeum vulgare L.) is (1) accelerated by exogenous ethylene exposure; (2) accompanied by differential expression of ethylene synthesis and sig...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcy059

    authors: Schneider HM,Wojciechowski T,Postma JA,Brown KM,Lynch JP

    更新日期:2018-06-28 00:00:00

  • Variation amongst survivor populations of white clover collected from sites across Europe: growth attributes and physiological responses to low temperature.

    abstract::Experiments were carried out at IGER, Aberystwyth, UK to investigate traits of direct relevance to the processes of overwintering and spring growth in white clover (Trifolium repens L.). The plant material used was derived from baseline populations of the cultivar AberHerald and survivor populations generated after 2-...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcf037

    authors: Collins RP,Helgadóttir A,Fothergill M,Rhodes I

    更新日期:2002-03-01 00:00:00

  • Longitudinal zonation pattern in Arabidopsis root tip defined by a multiple structural change algorithm.

    abstract::Background and Aims The Arabidopsis thaliana root is a key experimental system in developmental biology. Despite its importance, we are still lacking an objective and broadly applicable approach for identification of number and position of developmental domains or zones along the longitudinal axis of the root apex or ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcw101

    authors: Pacheco-Escobedo MA,Ivanov VB,Ransom-Rodríguez I,Arriaga-Mejía G,Ávila H,Baklanov IA,Pimentel A,Corkidi G,Doerner P,Dubrovsky JG,Álvarez-Buylla ER,Garay-Arroyo A

    更新日期:2016-10-01 00:00:00

  • Ectomycorrhizal Inocybe species associate with the mycoheterotrophic orchid Epipogium aphyllum but not its asexual propagules.

    abstract:BACKGROUND AND AIMS:Epipogium aphyllum is a Eurasian achlorophyllous, mycoheterotrophic forest orchid. Due to its rarity, it is often protected, and its biology is poorly known. The identity and pattern of colonization of fungal associates providing carbon to this orchid have not been studied previously. METHODS:Using...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcn269

    authors: Roy M,Yagame T,Yamato M,Iwase K,Heinz C,Faccio A,Bonfante P,Selosse MA

    更新日期:2009-08-01 00:00:00

  • Multiple origins of the determinate growth habit in domesticated common bean (Phaseolus vulgaris).

    abstract:BACKGROUND AND AIMS:The actual number of domestications of a crop is one of the key questions in domestication studies. Answers to this question have generally been based on relationships between wild progenitors and domesticated descendants determined with anonymous molecular markers. In this study, this question was ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs207

    authors: Kwak M,Toro O,Debouck DG,Gepts P

    更新日期:2012-12-01 00:00:00

  • A trade-off between guerrilla and phalanx growth forms in Leymus secalinus under different nutrient supplies.

    abstract:BACKGROUND AND AIMS:A phalanx growth form enables clonal plants to make better use of resource-rich patches, whereas a guerrilla growth form provides them with opportunities to escape from resource-poor sites. Leymus secalinus produces both spreading (guerrilla form) and clumping ramets (phalanx form). Here, the hypoth...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl086

    authors: Ye XH,Yu FH,Dong M

    更新日期:2006-07-01 00:00:00

  • Parental origin and genome evolution in the allopolyploid Iris versicolor.

    abstract:BACKGROUND AIMS:One of the classic examples of an allopolyploid is Iris versicolor, 'Blue Flag' (2n = 108), first studied by Edgar Anderson and later popularized by George Ledyard Stebbins in cytogenetics and evolutionary text-books. It is revisited here using modern molecular and cytogenetic tools to investigate its p...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm116

    authors: Lim KY,Matyasek R,Kovarik A,Leitch A

    更新日期:2007-08-01 00:00:00

  • Divergent evolution of the chloroplast small heat shock protein gene in the genera Rhododendron (Ericaceae) and Machilus (Lauraceae).

    abstract:BACKGROUND AND AIMS:Evolutionary and ecological roles of the chloroplast small heat shock protein (CPsHSP) have been emphasized based on variations in protein contents; however, DNA sequence variations related to the evolutionary and ecological roles of this gene have not been investigated. In the present study, a basa...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl288

    authors: Wu ML,Lin TP,Lin MY,Cheng YP,Hwang SY

    更新日期:2007-03-01 00:00:00

  • Fine-scale clonal structure and diversity within patches of a clone-forming dioecious shrub, Ilex leucoclada (Aquifoliaceae).

    abstract:BACKGROUND AND AIMS:The mode of reproduction (sexual vs. asexual) is likely to have important effects on genetic variation and its spatial distribution within plant populations. An investigation was undertaken of fine-scale clonal structure and diversity within patches of Ilex leucoclada (a clone-forming dioecious shru...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mci025

    authors: Torimaru T,Tomaru N

    更新日期:2005-01-01 00:00:00

  • Sensitivity of the invasive geophyte Oxalis pes-caprae to nutrient availability and competition.

    abstract:BACKGROUND AND AIMS:Invasion by alien plants may be partially related to disturbance-related increases in nutrient availability and decreases of competition with native species, and to superior competitive ability of the invader. Oxalis pes-caprae is an invasive winter geophyte in the Mediterranean Islands that reprodu...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl289

    authors: Sala A,Verdaguer D,Vilà M

    更新日期:2007-04-01 00:00:00

  • Nitrogen reserves, spring regrowth and winter survival of field-grown alfalfa (Medicago sativa) defoliated in the autumn.

    abstract:AIMS:The objective of the study was to characterize variations in proline, arginine, histidine, vegetative storage proteins, and cold-inducible gene expression in overwintering roots of field-grown alfalfa, in response to autumn defoliation, and in relation to spring regrowth and winter survival. METHODS:Field trials,...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcj006

    authors: Dhont C,Castonguay Y,Nadeau P,Bélanger G,Drapeau R,Laberge S,Avice JC,Chalifour FP

    更新日期:2006-01-01 00:00:00

  • Tree litter and forest understorey vegetation: a conceptual framework to understand the effects of tree litter on a perennial geophyte, Anemone nemorosa.

    abstract:BACKGROUND AND AIMS:Litter is a key factor in structuring plant populations, through positive or negative interactions. The litter layer forms a mechanical barrier that is often strongly selective against individuals lacking hypocotyle plasticity. Litter composition also interacts with plant growth by providing benefic...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs047

    authors: Baltzinger M,Archaux F,Dumas Y

    更新日期:2012-05-01 00:00:00

  • Light and competition gradients fail to explain the coexistence of shade-tolerant Fagus sylvatica and shade-intermediate Quercus petraea seedlings.

    abstract:BACKGROUND AND AIMS:The coexistence of forest tree species has often been linked to differences among species in terms of their response to light availability during the regeneration stage. From this perspective, species coexistence results from growth-growth or mortality-growth trade-offs along spatial light gradients...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mct200

    authors: Van Couwenberghe R,Gégout JC,Lacombe E,Collet C

    更新日期:2013-11-01 00:00:00

  • The storage of green coffee (Coffea arabica): decrease of viability and changes of potential aroma precursors.

    abstract:BACKGROUND AND AIMS:When green coffee is stored for a prolonged time the coffee quality decreases distinctively. Apart from well-known 'off-notes' that arise from undesired oxidations of lipids, a typical 'flattening' of the cup quality is detectable. In order to elucidate the biological causes for this phenomenon, dif...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm277

    authors: Selmar D,Bytof G,Knopp SE

    更新日期:2008-01-01 00:00:00

  • Going with the flow: analysis of population structure reveals high gene flow shaping invasion pattern and inducing range expansion of Mikania micrantha in Asia.

    abstract:BACKGROUND AND AIMS:Mikania micrantha, a climbing perennial weed of the family Asteraceae, is native to Latin America and is highly invasive in the tropical belt of Asia, Oceania and Australia. This study was framed to investigate the population structure of M. micrantha at a large spatial scale in Asia and to identify...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcaa044

    authors: Banerjee AK,Hou Z,Lin Y,Lan W,Tan F,Xing F,Li G,Guo W,Huang Y

    更新日期:2020-06-01 00:00:00