Abstract:
Background and Aims:Diurnal changes in solar position and intensity combined with the structural complexity of plant architecture result in highly variable and dynamic light patterns within the plant canopy. This affects productivity through the complex ways that photosynthesis responds to changes in light intensity. Current methods to characterize light dynamics, such as ray-tracing, are able to produce data with excellent spatio-temporal resolution but are computationally intensive and the resulting data are complex and high-dimensional. This necessitates development of more economical models for summarizing the data and for simulating realistic light patterns over the course of a day. Methods:High-resolution reconstructions of field-grown plants are assembled in various configurations to form canopies, and a forward ray-tracing algorithm is applied to the canopies to compute light dynamics at high (1 min) temporal resolution. From the ray-tracer output, the sunlit or shaded state for each patch on the plants is determined, and these data are used to develop a novel stochastic model for the sunlit-shaded patterns. The model is designed to be straightforward to fit to data using maximum likelihood estimation, and fast to simulate from. Key Results:For a wide range of contrasting 3-D canopies, the stochastic model is able to summarize, and replicate in simulations, key features of the light dynamics. When light patterns simulated from the stochastic model are used as input to a model of photoinhibition, the predicted reduction in carbon gain is similar to that from calculations based on the (extremely costly) ray-tracer data. Conclusions:The model provides a way to summarize highly complex data in a small number of parameters, and a cost-effective way to simulate realistic light patterns. Simulations from the model will be particularly useful for feeding into larger-scale photosynthesis models for calculating how light dynamics affects the photosynthetic productivity of canopies.
journal_name
Ann Botjournal_title
Annals of botanyauthors
Retkute R,Townsend AJ,Murchie EH,Jensen OE,Preston SPdoi
10.1093/aob/mcy067subject
Has Abstractpub_date
2018-08-01 00:00:00pages
291-302issue
2eissn
0305-7364issn
1095-8290pii
5004660journal_volume
122pub_type
杂志文章相关文献
ANNALS OF BOTANY文献大全abstract::Background and Aims Morphological variation in light-foraging strategies potentially plays important roles in efficient light utilization and carbon assimilation in spatially and temporally heterogeneous environments such as tropical moist forest understorey. By considering a suite of morphological traits at various h...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcw140
更新日期:2016-10-01 00:00:00
abstract:BACKGROUND AND AIMS:Since the proposal of the cohesion theory there has been a paradox that the lumenal surface of vessels is rich in hydrophobic lignin, while tension in the rising sap requires adhesion to a hydrophilic surface. This study sought to characterize the strength of that adhesion in maize (Zea mays), the w...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcu020
更新日期:2014-05-01 00:00:00
abstract:BACKGROUND AND AIMS:This paper examines the basis of the greater tolerance of an indica rice cultivar FR13A to complete submergence compared with relatively intolerant japonica rice CT6241. We study whether this superior tolerance is related to its greater tolerance to O2 shortage and to an ability to run a more favour...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mci224
更新日期:2005-09-01 00:00:00
abstract::The present study evaluated waterlogging tolerance, root porosity and radial O(2) loss (ROL) from the adventitious roots, of seven upland, three paddy, and two deep-water genotypes of rice (Oryza sativa L.). Upland types, with the exception of one genotype, were as tolerant of 30 d soil waterlogging as the paddy and d...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcf114
更新日期:2003-01-01 00:00:00
abstract:BACKGROUNDS AND AIMS:Thermogenesis in reproductive organs is known from several plant families, including the Araceae. A study was made of the relationship between temperature increase and spadix size in the subfamily Aroideae in order to determine whether the quantitative variation of heat production among species and...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mci157
更新日期:2005-07-01 00:00:00
abstract::Musa L. (Musaceae) is currently separated into five sections (Musa. Rhodochlamys, Callimusa, Australimusa and Ingentimusa) based on chromosome numbers and morphological characters. However, the validation of this classification system is questioned due to the common occurrence of hybridizations across sections and the...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcf170
更新日期:2002-08-01 00:00:00
abstract:BACKGROUND AND AIMS:Species in plant communities segregate along fine-scale hydrological gradients. Although this phenomenon is not unique to fynbos, this community regenerates after fire and therefore provides an opportunity to study the ecological genesis of hydrological niche segregation. METHODS:Following wildfire...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcs160
更新日期:2012-11-01 00:00:00
abstract:BACKGROUND AND AIMS:Hydration, rupture and exine opening due to the sudden and large expansion of intine are typical of taxoid-type pollen grains. A hemispheric outgrowth external to the exine was observed on Cupressus and Juniperus pollen grains before the intine swelling and exine release. However, the actual existen...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcr144
更新日期:2011-08-01 00:00:00
abstract::Trimenia moorei (Oliv.) Philipson is an andromonoecious liane with >0.40 of the total flower buds maturing as bisexual flowers. Male and bisexual flowers are strongly scented with pollen, anther sacs and receptacle scars testing positively for volatile emissions. Scent analyses detect over 20 components. The major fat...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcg157
更新日期:2003-09-01 00:00:00
abstract:BACKGROUND AND AIMS:Although allopolyploidy is a prevalent speciation mechanism in plants, its adaptive consequences are poorly understood. In addition, the effects of allopolyploidy per se (i.e. hybridization and chromosome doubling) can be confounded with those of subsequent evolutionary divergence between allopolypl...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcl137
更新日期:2006-09-01 00:00:00
abstract:BACKGROUND AND AIMS:The family Balsaminaceae is essentially herbaceous, except for some woodier species that can be described as 'woody' herbs or small shrubs. The family is nested within the so-called balsaminoid clade of Ericales, including the exclusively woody families Tetrameristaceae and Marcgraviaceae, which is ...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcr310
更新日期:2012-03-01 00:00:00
abstract:BACKGROUND AND AIMS:Recent biodiversity research has focused on ecosystem processes, but less is known about responses of populations of individual plant species to changing community diversity and implications of genetic variation within species. To address these issues, effects of plant community diversity on the per...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcn070
更新日期:2008-07-01 00:00:00
abstract:BACKGROUND AND AIMS:Mineral elements have many essential and beneficial functions in plants. Phosphorus (P) deficiency can result in changes in the ionomes of plant organs. The aims of this study were to characterize the effects of P supply on the ionomes of shoots and roots, and to identify chromosomal quantitative tr...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcaa055
更新日期:2020-06-19 00:00:00
abstract:BACKGROUND AND SCOPE:Over more than 120 years of scientific study since Schimper's seminal work, the recognized categories of structurally dependent plants have changed several times. Currently, ignoring parasitic mistletoes, it is usual to distinguish four functional groups: (1) true epiphytes; (2) primary hemiepiphyt...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mct085
更新日期:2013-06-01 00:00:00
abstract:BACKGROUND AND AIMS:Xylem flows into most fruits decline as the fruit develop, with important effects on mineral and carbohydrate accumulation. It has been hypothesized that an increase in xylem hydraulic resistance (RT) contributes to this process. This study examined changes in RT that occur during development of the...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mct101
更新日期:2013-07-01 00:00:00
abstract:BACKGROUND AND AIMS:Lippia scaberrima, an aromatic indigenous South African plant, with medicinal application, potentially has economic value. The production of essential oil from this plant has not been optimized, and this study of the chemico-morphological characteristics was aimed at determining the location of oil ...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcm064
更新日期:2007-06-01 00:00:00
abstract:BACKGROUND AND AIMS:Adaptive explanations for variation in sex allocation centre on variation in resource status and variation in the mating environment. The latter can occur when dichogamy causes siring opportunity to vary across the flowering season. In this study, it is hypothesized that the widespread tendency towa...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcu087
更新日期:2014-07-01 00:00:00
abstract:BACKGROUND AND AIMS:Alterations of plasmodesma (PD) connectivity are likely to be very important for plant development. Here, the repetitive division pattern of cambial initials in Populus nigra 'italica' was studied to follow the development of the PD network during maturation. Furthermore, seasonal changes were inves...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcp300
更新日期:2010-03-01 00:00:00
abstract:BACKGROUND AND AIMS:Models assessing the prospects of plant species at the landscape level often focus primarily on the relationship between species dynamics and landscape structure. However, the short-term prospects of species with slow responses to landscape changes depend on the factors affecting local population dy...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcs064
更新日期:2012-11-01 00:00:00
abstract:BACKGROUND:The amount of DNA comprising the genome of an organism (its genome size) varies a remarkable 40 000-fold across eukaryotes, yet most groups are characterized by much narrower ranges (e.g. 14-fold in gymnosperms, 3- to 4-fold in mammals). Angiosperms stand out as one of the most variable groups with genome si...
journal_title:Annals of botany
pub_type: 杂志文章,评审
doi:10.1093/aob/mcp003
更新日期:2009-08-01 00:00:00
abstract::Roots of Allium cepa L. grown in aerated water elongate rapidly, but are not graviresponsive. These roots (1) possess extensive columella tissues comprised of cells containing numerous sedimented amyloplasts, (2) lack mucilage on their tips, and (3) are characterized by a weakly polar movement of calcium (Ca) across ...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/oxfordjournals.aob.a087216
更新日期:1986-01-01 00:00:00
abstract:BACKGROUND AND AIMS:Biotic and abiotic stressors can cause different defoliation patterns within trees. Foliar pathogens of conifers commonly prefer older needles and infection with defoliation that progresses from the bottom crown to the top. The functional role of the lower crown of trees is a key question to address...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcaa013
更新日期:2020-05-13 00:00:00
abstract:BACKGROUND AND AIMS:Plants adapted for pollination by rodents tend to exhibit a distinct floral syndrome that includes dull coloured and geoflorous inflorescences and nocturnal anthesis and nectar production. On the basis of their floral traits, it was predicted that two African Colchicum species (C. scabromarginatum a...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcn157
更新日期:2008-11-01 00:00:00
abstract:BACKGROUND AND AIMS:Delayed selfing is the predominant mode of autonomous self-pollination in flowering plants. However, few delayed selfing mechanisms have been documented. This research aims to explore a new delayed selfing mechanism induced by stigmatic fluid in Roscoea debilis, a small perennial ginger. METHODS:Fl...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcs169
更新日期:2012-10-01 00:00:00
abstract:BACKGROUND:Submerged plants composed of charophytes (green algae) and angiosperms develop dense vegetation in small, shallow lakes and in littoral zones of large lakes. Many small, oligotrophic plant species have declined due to drainage and fertilization of lakes, while some tall, eutrophic species have increased. Alt...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcz084
更新日期:2019-10-18 00:00:00
abstract:BACKGROUND AND AIMS:The mangrove Rhizophora mucronata has previously been reported to lack annual growth rings, thus barring it from dendrochronological studies. In this study the reported absence of the growth rings was reconsidered and the periodic nature of light and dark brown layers visible on polished stem discs ...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mch115
更新日期:2004-07-01 00:00:00
abstract:BACKGROUND AND AIMS:Floral nectar concentration and chemical composition of 26 plant species native to the temperate forest of southern South America are reported and the relationships with the flower type are evaluated. METHODS:Nectar concentration was measured with a hand refractometer and sugar composition was anal...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcj043
更新日期:2006-03-01 00:00:00
abstract:BACKGROUND AND AIMS:Although numerous angraecoid orchids in Madagascar display typical sphingophilous syndrome (i.e. white, nectariferous, long-spurred flowers, producing a strong scent at the crepuscule that is attractive to moths), three species of Angraecum in Reunion, belonging to the endemic section Hadrangis, hav...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcl056
更新日期:2006-06-01 00:00:00
abstract:Background and Aims:Predicting both plant water status and leaf gas exchange under various environmental conditions is essential for anticipating the effects of climate change on plant growth and productivity. This study developed a functional-structural grapevine model which combines a mechanistic understanding of sto...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcx141
更新日期:2018-04-18 00:00:00
abstract:Background and Aims:Within-plant spatial heterogeneity in the production of and demand for assimilates may have major implications for the formation of fruits. Spatial heterogeneity is related to organ age, but also to position on the plant. This study quantifies the variation in local carbohydrate availability for the...
journal_title:Annals of botany
pub_type: 杂志文章
doi:10.1093/aob/mcx210
更新日期:2018-04-18 00:00:00