Lacinutrix cladophorae sp. nov., a flavobacterium isolated from the green alga Cladophora stimpsonii, transfer of Flavirhabdus iliipiscaria Shakeela et al. 2015 to the genus Lacinutrix as Lacinutrix iliipiscaria comb. nov. and emended description of the g

Abstract:

:A strictly aerobic, Gram-stain-negative, rod-shaped, motile by gliding and yellow-pigmented bacterium, designated strain 7Alg 4T, was isolated from the green alga Cladophora stimpsonii. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the novel strain was affiliated to the family Flavobacteriaceae of the phylum Bacteroidetes, and was most closely related to the recognized species of the genera Lacinutrixand Flavirhabdus, with 16S rRNA gene sequence similarities of 95.1-98.1 and 97.0 %, respectively. Strain 7Alg 4T grew in the presence of 1-5 % NaCl and at 4-32 °C, and hydrolysed aesculin, gelatin, starch and Tween 80. The prevalent fatty acids were iso-C15 : 1 G, iso-C15 : 0, iso-C17 : 0 3-OH, iso-C15 : 0 3-OH and C15 : 0. The polar lipid profile was characterized by the presence of phosphatidylethanolamine, three unidentified aminolipids and four unidentified lipids. The major respiratory quinone was MK-6. The DNA G+C content was 31.9 mol%. On the basis of the differences in 16S rRNA gene sequences, chemotaxonomic and phenotypic characteristics, it is suggested that strain 7Alg 4T represents a novel species of the genus Lacinutrix, for which the name Lacinutrixcladophorae sp. nov. is proposed. The type strain is 7Alg 4T (=KCTC 23036T=KMM 6381T). Reclassification of Flavirhabdus iliipiscaria as Lacinutrix iliipiscaria comb. nov. and an emend of the genus Lacinutrix are also proposed.

authors

Nedashkovskaya OI,Kim SG,Zhukova NV,Lee JS,Mikhailov VV

doi

10.1099/ijsem.0.001353

subject

Has Abstract

pub_date

2016-11-01 00:00:00

pages

4339-4346

issue

11

eissn

1466-5026

issn

1466-5034

journal_volume

66

pub_type

杂志文章
  • Bacillus kiskunsagensis sp. nov., a novel alkaliphilic and moderately halophilic bacterium isolated from soda soil.

    abstract::An alkaliphilic and moderately halophilic strain characterized by optimal growth at pH 9.0-10.0 and 7 % (w/v) NaCl, and designated B16-24T, was isolated from the rhizosphere soil of the bayonet grass Bolboschoenus maritimus at a soda pond in the Kiskunság National Park, Hungary. Cells of the strain were Gram-staining-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002149

    authors: Borsodi AK,Tóth E,Aszalós JM,Bárány Á,Schumann P,Spröer C,Kovács AL,Márialigeti K,Szili-Kovács T

    更新日期:2017-09-01 00:00:00

  • Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt.

    abstract::Three thermo-tolerant halophilic archaeal strains, SR-441T, SR-412 and SR-188, were isolated from commercial salt samples. Cells were non-motile pleomorphic rod-shaped, and stained Gram-negative. Colonies were pink-pigmented. The three strains were able to grow with 1.7-4.6 M NaCl (optimum, 2.5 M), at pH 6.5-9.0 (opti...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001455

    authors: Minegishi H,Shimogaki R,Enomoto S,Echigo A,Kondo Y,Nagaoka S,Shimane Y,Kamekura M,Itoh T,Ohkuma M,Nunoura T,Takai K,Usami R

    更新日期:2016-12-01 00:00:00

  • Micromonospora wenchangensis sp. nov., isolated from mangrove soil.

    abstract::An actinomycete, strain 2602GPT1-05(T), was isolated from a composite mangrove soil sample collected from Wenchang, Hainan province, China. Strain 2602GPT1-05(T) showed closest 16S rRNA gene sequence similarity to Micromonospora haikouensis 232617(T) (99.05 %), and phylogenetically clustered with Micromonospora haikou...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.045476-0

    authors: Ren J,Li L,Wei B,Tang YL,Deng ZX,Sun M,Hong K

    更新日期:2013-07-01 00:00:00

  • Sphingomonas yabuuchiae sp. nov. and Brevundimonas nasdae sp. nov., isolated from the Russian space laboratory Mir.

    abstract::On the basis of phenotypic and genotypic characteristics and 16S rRNA gene sequence analysis, novel species belonging to the genera Sphingomonas and Brevundimonas were identified from samples taken from the Russian space laboratory Mir. Strain A1-18(T) was isolated from the air. 16S rDNA sequence analysis showed that ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02829-0

    authors: Li Y,Kawamura Y,Fujiwara N,Naka T,Liu H,Huang X,Kobayashi K,Ezaki T

    更新日期:2004-05-01 00:00:00

  • Bifidobacterium bombi sp. nov., from the bumblebee digestive tract.

    abstract::Gram-positive-staining, anaerobic, non-spore-forming, lactate- and acetate-producing bacterial strains were isolated from the digestive tracts of different bumblebee species (Bombus lucorum, Bombus pascuorum and Bombus lapidarius). All of the isolates produced fructose-6-phosphate phosphoketolase activity. A represent...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.002915-0

    authors: Killer J,Kopecný J,Mrázek J,Rada V,Benada O,Koppová I,Havlík J,Straka J

    更新日期:2009-08-01 00:00:00

  • Hydrogenophaga caeni sp. nov., isolated from activated sludge.

    abstract::A Gram-negative bacterium, designated strain EMB71(T), was isolated from activated sludge used for enhanced biological phosphorus removal in a sequencing batch reactor. The cells of the isolate were facultatively aerobic, motile rods with single polar flagella. Growth was observed to occur at 15-35 degrees C (optimall...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64629-0

    authors: Chung BS,Ryu SH,Park M,Jeon Y,Chung YR,Jeon CO

    更新日期:2007-05-01 00:00:00

  • Marmoricola solisilvae sp. nov. and Marmoricola terrae sp. nov., isolated from soil and emended description of the genus Marmoricola.

    abstract::Two strains of species of the genus Marmoricola, designated KIS18-7T and JOS5-1T, were isolated from soil samples in Korea. The 16S rRNA gene sequence of strain KIS18-7T showed highest similarities with Marmoricola scoriae Sco-D01T (97.8 %), Marmoricola aequoreus SST-45T (97.6 %) and Marmoricola aurantiacus BC 361T (9...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000184

    authors: Kim SJ,Lim JM,Hamada M,Ahn JH,Weon HY,Suzuki KI,Ahn TY,Kwon SW

    更新日期:2015-06-01 00:00:00

  • Novosphingobium fontis sp. nov., isolated from a spring.

    abstract::A bacterial strain designated STM-14T was isolated from a spring in Taiwan and characterized using a polyphasic taxonomic approach. Strain STM-14T was a Gram-stain-negative, aerobic, poly-β-hydroxybutyrate-accumulating, non-motile, rod-shaped bacterium and formed cream-coloured colonies. Strain STM-14T grew at 15-37 °...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001973

    authors: Sheu SY,Liu LP,Young CC,Chen WM

    更新日期:2017-07-01 00:00:00

  • Ketobacter alkanivorans gen. nov., sp. nov., an n-alkane-degrading bacterium isolated from seawater.

    abstract::Strain GI5T was isolated from a surface seawater sample collected from Garorim Bay (West Sea, Republic of Korea). The isolated strain was aerobic, Gram-stain-negative, rod-shaped, motile by means of a polar flagellum, negative for catalase and weakly positive for oxidase. The optimum growth pH, salinity and temperatur...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002823

    authors: Kim SH,Kim JG,Jung MY,Kim SJ,Gwak JH,Yu WJ,Roh SW,Kim YH,Rhee SK

    更新日期:2018-07-01 00:00:00

  • Desulfovibrio bastinii sp. nov. and Desulfovibrio gracilis sp. nov., moderately halophilic, sulfate-reducing bacteria isolated from deep subsurface oilfield water.

    abstract::Two moderately halophilic, mesophilic, sulfate-reducing bacteria were isolated from production-water samples from Emeraude Oilfield, Congo. Motile, vibrioid cells of SRL4225T grew optimally at a concentration of 4 % NaCl, at pH 5.8-6.2, with a minimal pH for growth of 5.2, showing that it is a moderately acidophilic b...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02977-0

    authors: Magot M,Basso O,Tardy-Jacquenod C,Caumette P

    更新日期:2004-09-01 00:00:00

  • Paraliobacillus zengyii sp. nov., a slightly halophilic and extremely halotolerant bacterium isolated from Tibetan antelope faeces.

    abstract::Two rod-shaped, slightly halophilic and extremely halotolerant bacterial strains (X-1125T and X-1174), which were Gram-stain-positive, facultatively anaerobic and motile with peritrichous flagella, were isolated from the faeces of Tibetan antelopes. Their optimal temperature, NaCl concentration and pH for growth were ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003333

    authors: Wang X,Yang J,Lu S,Lai XH,Jin D,Pu J,Niu L,Zhu W,Liang J,Huang Y,Wang B,Wu X,Liang H,Xu J

    更新日期:2019-05-01 00:00:00

  • Phenotypic variability and phylogenetic relationships of the genera Tolypothrix and Calothrix (Nostocales, Cyanobacteria) from running water.

    abstract::The taxonomy of heterocystous cyanobacteria belonging to the genera Calothrix and Tolypothrix has long been a matter of debate, but their phylogenetic relationships are still not well understood. Our aim was to compare the phylogeny and morphology of members of these genera, which exhibit basal-apical polarity. A phyl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.027581-0

    authors: Berrendero E,Perona E,Mateo P

    更新日期:2011-12-01 00:00:00

  • The phylogenetic position of enteromonads: a challenge for the present models of diplomonad evolution.

    abstract::Unikaryotic enteromonads and diplokaryotic diplomonads have been regarded as closely related protozoan groups. It has been proposed that diplomonads originated within enteromonads in a single event of karyomastigont duplication. This paper presents the first study to address these questions using molecular phylogeneti...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63542-0

    authors: Kolisko M,Cepicka I,Hampl V,Kulda J,Flegr J

    更新日期:2005-07-01 00:00:00

  • Devosia ginsengisoli sp. nov., isolated from ginseng cultivation soil.

    abstract::A Gram-stain-negative, strictly aerobic, motile, ivory-coloured and rod-shaped bacterium (designated Gsoil 520T) isolated from ginseng cultivation soil was characterized by using a polyphasic approach to clarify its taxonomic position. Strain Gsoil 520T was observed to grow optimally at 30 °C and pH 7.0 on Reasoner's ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003843

    authors: Quan XT,Siddiqi MZ,Liu QZ,Lee SM,Im WT

    更新日期:2020-03-01 00:00:00

  • Aminivibrio pyruvatiphilus gen. nov., sp. nov., an anaerobic, amino-acid-degrading bacterium from soil of a Japanese rice field.

    abstract::A novel anaerobic bacterium that could ferment amino acids and organic acids was isolated from an anaerobic, propionate-oxidizing enrichment culture originating from soil of a rice field in Japan. Cells of the isolate, designated strain 4F6E(T), were Gram-staining-negative, oxidase- and catalase-negative, non-spore-fo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.052225-0

    authors: Honda T,Fujita T,Tonouchi A

    更新日期:2013-10-01 00:00:00

  • Bifidobacterium tsurumiense sp. nov., from hamster dental plaque.

    abstract::Three novel micro-organisms, designated strains OMB115(T), OMB118 and OMB120, were isolated from dental plaque from golden hamsters fed with a high-carbohydrate diet. The three strains were Gram-positive, facultatively anaerobic rods that lacked catalase activity. Analysis of their partial 16S rRNA gene sequences indi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65296-0

    authors: Okamoto M,Benno Y,Leung KP,Maeda N

    更新日期:2008-01-01 00:00:00

  • Leifsonia soli sp. nov., a yellow-pigmented actinobacterium isolated from teak rhizosphere soil.

    abstract::Two yellow-pigmented, Gram-stain-positive, aerobic, motile, short rod-shaped bacteria were isolated from natural teak tree rhizosphere soil and their taxonomic positions were determined by using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strains TG-S248(T) and TG-S240 formed a disti...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.014373-0

    authors: Madhaiyan M,Poonguzhali S,Lee JS,Senthilkumar M,Lee KC,Sundaram S

    更新日期:2010-06-01 00:00:00

  • Caproiciproducens galactitolivorans gen. nov., sp. nov., a bacterium capable of producing caproic acid from galactitol, isolated from a wastewater treatment plant.

    abstract::A strictly anaerobic, Gram-stain-positive, non-spore-forming, rod-shaped bacterial strain, designated BS-1T, was isolated from an anaerobic digestion reactor during a study of bacteria utilizing galactitol as the carbon source. Its cells were 0.3-0.5 μm × 2-4 μm, and they grew at 35-45 °C and at pH 6.0-8.0. Strain BS-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000665

    authors: Kim BC,Seung Jeon B,Kim S,Kim H,Um Y,Sang BI

    更新日期:2015-12-01 00:00:00

  • Micromonospora sediminis sp. nov., isolated from mangrove sediment.

    abstract::The novel actinomycete, strain CH3-3T, was isolated from mangrove sediment collected from Chonburi Province, Thailand. On the basis of its spore morphology and chemotaxonomic characteristics, the strain belonged to the genus Micromonospora. It contained meso-diaminopimelic acid, glucose, mannose, xylose, ribose and rh...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001175

    authors: Phongsopitanun W,Kudo T,Ohkuma M,Pittayakhajonwut P,Suwanborirux K,Tanasupawat S

    更新日期:2016-08-01 00:00:00

  • Pseudoalteromonas byunsanensis sp. nov., isolated from tidal flat sediment in Korea.

    abstract::A Gram-negative, motile, strictly aerobic, violet-pigment-producing bacterium, designated strain FR1199T, was isolated from tidal flat sediment of Byunsan, South Korea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain FR1199T represents a distinct line of descent within the genus Pseudoalteromo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63750-0

    authors: Park YD,Baik KS,Yi H,Bae KS,Chun J

    更新日期:2005-11-01 00:00:00

  • Amphritea opalescens sp. nov., isolated from sediment adjacent to Fildes Peninsula, Antarctica.

    abstract::A taxonomic study was carried out on a Gram-stain-negative bacterium, namely strain ANRC-JH13T, isolated from a sediment sample collected at Jasper beach, adjacent to Fildes Peninsula, Antarctica. Cells of strain ANRC-JH13T were non-spore-forming rods and motile by the way of flagellum. Strain ANRC-JH13T was facultati...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003359

    authors: Han X,Zhang J,Zhang Y,Liu J,Fang W,Fang Z,Xiao Y

    更新日期:2019-06-01 00:00:00

  • Genome-based reclassification of Lactobacillus casei: emended classification and description of the species Lactobacillus zeae.

    abstract::Taxonomic relationships between Lactobacillus casei, Lactobacillus paracasei and Lactobacillus zeae have long been debated. Results of previous analyses have shown that overall genome relatedness indices (such as average nucleotide identity and core nucleotide identity) between the type strains L. casei ATCC 393T and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003969

    authors: Huang CH,Chen CC,Liou JS,Lee AY,Blom J,Lin YC,Huang L,Watanabe K

    更新日期:2020-06-01 00:00:00

  • Validation of publication of new names and new combinations previously effectively published outside the IJSEM.

    abstract::The purpose of this announcement is to effect the valid publication of the following new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists should send three copies of...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63263-0

    authors:

    更新日期:2004-05-01 00:00:00

  • Phylogenomic analysis of the family Peptostreptococcaceae (Clostridium cluster XI) and proposal for reclassification of Clostridium litorale (Fendrich et al. 1991) and Eubacterium acidaminophilum (Zindel et al. 1989) as Peptoclostridium litorale gen. nov.

    abstract::In 1994, analyses of clostridial 16S rRNA gene sequences led to the assignment of 18 species to Clostridium cluster XI, separating them from Clostridium sensu stricto (Clostridium cluster I). Subsequently, most cluster XI species have been assigned to the family Peptostreptococcaceae with some species being reassigned...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001548

    authors: Galperin MY,Brover V,Tolstoy I,Yutin N

    更新日期:2016-12-01 00:00:00

  • Mycobacterium florentinum sp. nov., isolated from humans.

    abstract::Eight mycobacterial strains isolated during an 11 year period from the sputum of independent patients with various pulmonary disorders and, in one case, from a lymph node of a young girl, were found to present identical features. Phenotypic and genotypic characteristics revealed that the most closely related species t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63485-0

    authors: Tortoli E,Rindi L,Goh KS,Katila ML,Mariottini A,Mattei R,Mazzarelli G,Suomalainen S,Torkko P,Rastogi N

    更新日期:2005-05-01 00:00:00

  • Yersinia aleksiciae sp. nov.

    abstract::Yersinia kristensenii consists of phenotypically heterogeneous strains. This is reflected by the existence of strains with various multilocus enzyme electrophoresis and 16S rRNA gene sequence types. Strains originally phenotyped as members of Y. kristensenii were studied using 16S rRNA gene sequencing, DNA-DNA hybridi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63220-0

    authors: Sprague LD,Neubauer H

    更新日期:2005-03-01 00:00:00

  • Deinococcus aerolatus sp. nov. and Deinococcus aerophilus sp. nov., isolated from air samples.

    abstract::Two strains of pink-coloured bacteria, 5516T-9(T) and 5516T-11(T), were isolated from an air sample collected in Korea. The taxonomic status of these novel strains was investigated by means of a polyphasic approach. The novel strains were Gram-positive, aerobic, non-spore-forming and coccus-shaped bacteria. The DNA G+...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016030-0

    authors: Yoo SH,Weon HY,Kim SJ,Kim YS,Kim BY,Kwon SW

    更新日期:2010-05-01 00:00:00

  • Hymenobacter glacieicola sp. nov., isolated from glacier ice.

    abstract::A Gram-stain-negative, rod-shaped, non-motile and red-pink-pigmented bacterial strain, designated B1909T, was isolated from an ice core drilled from Muztagh Glacier on the Tibetan Plateau, China. A phylogenetic tree based on 16S rRNA gene sequences showed that strain B1909T formed a lineage within the genus Hymenobact...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001266

    authors: Liu K,Liu Y,Wang N,Gu Z,Shen L,Xu B,Zhou Y,Liu H,Jiao N

    更新日期:2016-10-01 00:00:00

  • Methylovirgula ligni gen. nov., sp. nov., an obligately acidophilic, facultatively methylotrophic bacterium with a highly divergent mxaF gene.

    abstract::Two strains of Gram-negative, aerobic, non-pigmented, non-motile, rod-shaped bacteria were isolated from beechwood blocks during decay by the white-rot fungus Hypholoma fasciculare and were designated strains BW863(T) and BW872. They are capable of methylotrophic growth and assimilate carbon via the ribulose-bisphosph...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.010074-0

    authors: Vorob'ev AV,de Boer W,Folman LB,Bodelier PL,Doronina NV,Suzina NE,Trotsenko YA,Dedysh SN

    更新日期:2009-10-01 00:00:00

  • Corallincola holothuriorum sp. nov., a facultative anaerobe isolated from sea cucumber intestine.

    abstract::Strain C4T, isolated from sea cucumber intestine in Weihai, Shandong, PR China, is a novel Gram-stain-negative, facultatively anaerobic, amphitrichously flagellated, short rod that grows as creamy white bacterial colonies on plates. Optimal growth of the strain was observed at 28-30 °C, pH 6.5-7.0 and at a concentrati...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003456

    authors: Xia HF,Chen GJ,Du ZJ

    更新日期:2019-08-01 00:00:00