Phenotypic variability and phylogenetic relationships of the genera Tolypothrix and Calothrix (Nostocales, Cyanobacteria) from running water.

abstract：:A Gram-negative, aerobic, coccobacillus to rod-shaped bacterium was isolated from three patients with chronic granulomatous disease. The organism was subjected to a polyphasic taxonomic study. A multilocus phylogenetic analysis based on the 16S rRNA gene, the internal transcribed spacer (ITS) region and the RecA prote...

journal_title：International journal of systematic and evolutionary microbiology

authors： Greenberg DE,Porcella SF,Stock F,Wong A,Conville PS,Murray PR,Holland SM,Zelazny AM

更新日期：2006-11-01 00:00:00

abstract：:A Gram-stain-negative, oxidase-negative, catalase-positive, facultative anaerobe, designated XJ16T, was isolated from a marine solar saltern on the coast of Weihai, China. Cells of strain XJ16T were long and rod-shaped. The colonies were ochre in colour and were able to reduce nitrate to nitrite. Optimal growth occurr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xia J,Zhao JX,Sang J,Chen GJ,Du ZJ

更新日期：2017-04-01 00:00:00

abstract：:A methanogenic organism from the domain Archaea, designated strain T10(T), was isolated from groundwater sampled from a deep diatomaceous shale formation located in Horonobe, Hokkaido, Japan. The strain utilized H2/CO2 and formate as substrates for methanogenesis. Cells were strictly anaerobic, Gram-negative-staining,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shimizu S,Ueno A,Tamamura S,Naganuma T,Kaneko K

更新日期：2013-11-01 00:00:00

abstract：:A Gram-negative bacterium, strain 3CB-1, isolated from a 3-chlorobenzoate enrichment culture inoculated with a sediment sample is capable of degrading various aromatic compounds and halogenated derivatives with nitrate as electron acceptor. Compounds capable of serving as carbon and energy sources include 3-chlorobenz...

journal_title：International journal of systematic and evolutionary microbiology

authors： Song B,Palleroni NJ,Häggblom MM

更新日期：2000-03-01 00:00:00

abstract：:Three Gram-negative, non-spore-forming, encapsulated bacteria were isolated from a Namibian river-bank soil (strains 277T and 307) and a semiarid savannah soil (strain A2-1cT). 16S rRNA gene sequence analyses placed them within subdivision 1 of the Acidobacteria and revealed 100 % similarity between strains 277T and 3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Foesel BU,Mayer S,Luckner M,Wanner G,Rohde M,Overmann J

更新日期：2016-01-01 00:00:00

abstract：:An analysis of 16S rRNA gene sequences from archived clinical reference specimens has identified two novel Neisseria species. For each species, two strains from independent sources were identified. Amongst species with validly published names, the closest species to the newly identified organisms were Neisseria canis,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wolfgang WJ,Carpenter AN,Cole JA,Gronow S,Habura A,Jose S,Nazarian EJ,Kohlerschmidt DJ,Limberger R,Schoonmaker-Bopp D,Spröer C,Musser KA

更新日期：2011-01-01 00:00:00

abstract：:Analysis of 16S rRNA gene sequences has been the method generally used to study the evolution and phylogeny of bacteria. Phylogenetic analysis of the 16S rRNA gene has shown the position of the genus Helicobacter in the epsilon-subclass of the Proteobacteria. Because 16S rRNA-based phylogeny does not always correspond...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mikkonen TP,Kärenlampi RI,Hänninen ML

更新日期：2004-05-01 00:00:00

abstract：:A facultatively anaerobic, Gram-stain-positive, catalase-negative, rod-shaped lactic acid bacterium, designated SG816T, was isolated from small intestine of a swine. Optimal growth occurred at 37 °C and pH 7.0. Furthermore, growth occurred in NaCl up to 0.5 % (w/v) but not at levels of salinity higher than 1 %. Compar...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim JS,Choe H,Kim KM,Lee YR,Rhee MS,Park DS

更新日期：2018-10-01 00:00:00

abstract：:Forty strains isolated from soil taken from a hay meadow were assigned to the genus Dactylosporangium on the basis of colonial properties. 16S rRNA gene sequence analysis showed that the isolates formed a group that was most closely related to the type strain of Dactylosporangium aurantiacum, but well separated from o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim BY,Stach JEM,Weon HY,Kwon SW,Goodfellow M

更新日期：2010-08-01 00:00:00

abstract：:An anaerobic, thermophilic bacterium, strain SET IS-9(T), was isolated from an Icelandic hot spring. Cells of strain SET IS-9(T) are short, slightly curved, motile rods. The strain grows chemolithotrophically on CO, producing equimolar quantities of H(2) and CO(2). It also grows fermentatively on lactate or pyruvate i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Novikov AA,Sokolova TG,Lebedinsky AV,Kolganova TV,Bonch-Osmolovskaya EA

更新日期：2011-10-01 00:00:00

abstract：:An aerobic, yellow-orange-pigmented, Gram-staining-negative bacterium, designated strain EM44(T), was isolated from seawater on the eastern coast of Jeju Island, Korea. Growth was observed at 15-35 degrees C (optimum 25-30 degrees C), pH 6.5-9.0 (optimum pH 7.0-8.5) and between 1 and 5 % NaCl (w/v) (optimum 2-4 %). Ce...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kahng HY,Lee SS,Kim JM,Jung JY,Lee MY,Park W,Jeon CO

更新日期：2010-07-01 00:00:00

abstract：:A novel actinomycete strain, designated YIM 75904(T), was isolated from a soil sample that had been collected from a dry and hot river valley in Dongchuan county, Yunnan province, south-western China. The taxonomic position of the novel strain was investigated by a polyphasic approach. In phylogenetic analyses based o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nie GX,Ming H,Li S,Zhou EM,Cheng J,Tang X,Feng HG,Tang SK,Li WJ

更新日期：2012-11-01 00:00:00

abstract：:A novel actinomycete, designated strain Sco-A36(T), was isolated from volcanic ash. Cells were aerobic, Gram-stain-positive, oxidase-negative, catalase-positive, non-motile cocci; colonies were yellow-coloured, smooth, entire and convex. Phylogenetic analysis showed that the organism formed a distinct phyletic line wi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SD,Lee DW,Ko YH

更新日期：2011-07-01 00:00:00

abstract：:Thirteen novel, obligately anaerobic, thermoacidophilic bacteria were isolated from deep-sea hydrothermal vent sites. Four of the strains, designated EP5-r(T), KM1, Mar08-272r(T) and Mar08-368r, were selected for metabolic and physiological characterization. With the exception of strain EP5-r(T), all strains were shor...

journal_title：International journal of systematic and evolutionary microbiology

authors： Flores GE,Hunter RC,Liu Y,Mets A,Schouten S,Reysenbach AL

更新日期：2012-06-01 00:00:00

abstract：:Two gram-negative, aerobic, non-pigmented, non-motile, rod-shaped bacteria, strains KMM 9015 and KMM 9018(T), were isolated from a sample of shallow sediment collected from the Sea of Japan. An analysis of the nearly complete 16S rRNA gene sequences showed that the isolates were very close to each other phylogenetical...

journal_title：International journal of systematic and evolutionary microbiology

authors： Romanenko LA,Tanaka N,Svetashev VI,Mikhailov VV

更新日期：2011-07-01 00:00:00

abstract：:A novel bacterial strain, IHBB 10212T, of the genus Chryseobacterium was isolated from a glacier near the Kunzum Pass located in the Lahaul-Spiti in the North-Western Himalayas of India. The cells were Gram-negative, aerobic, non-sporulating, single rods, lacked flagella, and formed yellow to orange pigmented colonies...

journal_title：International journal of systematic and evolutionary microbiology

authors： Pal M,Kumari M,Kiran S,Salwan R,Mayilraj S,Chhibber S,Gulati A

更新日期：2018-03-01 00:00:00

abstract：:Two yeast strains isolated from soil collected in Hokkaido, Japan, were found to secrete two extracellular lipases that exhibited activities at both 25 and 4 °C. Both strains could utilize olive oil, rapeseed oil, lard and fish oil as sole carbon sources. The similarity of the D1/D2 domain of the large subunit ribosom...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shimizu Y,Konno Y,Tomita Y

更新日期：2020-02-01 00:00:00

abstract：:One unidentified, Gram-stain-positive, catalase-negative coccus-shaped organism was recovered from a subcutaneous abscess of the udder of a sheep and subjected to a polyphasic taxonomic analysis. Based on cellular morphology and biochemical criteria, the isolate was tentatively assigned to the genus Streptococcus, alt...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zamora L,Pérez-Sancho M,Fernández-Garayzábal JF,Orden JA,Domínguez-Bernal G,de la Fuente R,Domínguez L,Vela AI

更新日期：2017-11-01 00:00:00

abstract：:A Gram-stain-negative, non-motile, coccoid- or oval-shaped bacterial strain, designated S-5(T), belonging to the class Alphaproteobacteria, was isolated from a tidal flat sediment of the Yellow Sea, Korea and was subjected to a polyphasic taxonomic study. Strain S-5(T) grew optimally at pH 7.0-8.0, at 30 °C and in the...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jung YT,Park S,Lee JS,Yoon JH

更新日期：2014-12-01 00:00:00

abstract：:A novel actinomycete, designated strain NEAU-TCZ24T, was isolated from soil and characterized using a polyphasic approach. The results of phylogenetic analysis based on the 16S rRNA gene sequence indicated that the organism should be assigned to the genus Cellulomonas and formed a stable clade with its closest relativ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tian Y,Han C,Hu J,Zhao J,Zhang C,Guo X,Wang X,Xiang W

更新日期：2019-04-01 00:00:00

abstract：:A bacterial isolate from the Baltic Sea, BA160(T), was characterized for its physiological and biochemical features, fatty acid profile, G+C content and phylogenetic position based on 16S rRNA gene sequences. The strain was isolated from the surface water of the central Baltic Sea during the decay of a plankton bloom....

journal_title：International journal of systematic and evolutionary microbiology

authors： Brettar I,Christen R,Höfle MG

更新日期：2004-11-01 00:00:00

abstract：:Two thermophilic, strictly chemolithoautotrophic, microaerophilic, hydrogen-oxidizing members of the Bacteria designated strain EX-H1T and strain EX-H2T were isolated from two separate deep-sea hydrothermal vent sites at 9 degrees N 104 degrees W in the Pacific Ocean and Guaymas Basin. The motile 2-4-microm-long rods ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Götz D,Banta A,Beveridge TJ,Rushdi AI,Simoneit BRT,Reysenbach AL

更新日期：2002-07-01 00:00:00

abstract：:The taxonomic position of an endophytic actinomycete, strain GKU 157T, isolated from the roots of a jambolan plum tree (Syzygium cumini L. Skeels) collected at Khao Khitchakut National Park, Chantaburi province, Thailand, was determined using a polyphasic taxonomic approach. 16S rRNA gene sequence analysis revealed th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rachniyom H,Matsumoto A,Indananda C,Duangmal K,Takahashi Y,Thamchaipenet A

更新日期：2015-06-01 00:00:00

abstract：:Three Gram-variable, rod-shaped bacterial strains, TF-16(T), TF-19 and TF-80(T), were isolated from a tidal flat of Daepo Beach (Yellow Sea) near Mokpo City, Korea, and their taxonomic positions were investigated by a polyphasic approach. These isolates grew optimally in the presence of 2 % NaCl and at 30 degrees C. T...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim IG,Lee MH,Jung SY,Song JJ,Oh TK,Yoon JH

更新日期：2005-03-01 00:00:00

abstract：:Two facultatively oligotrophic, intensely yellow-pigmented bacterial strains, RE35F/1T and RE10F/45, have been previously isolated from the western Mediterranean Sea (Bay of Calvi, Corsica, France) by 0.2 microm membrane filtration. The organisms were gram-negative, catalase- and oxidase-positive, strictly aerobic, ro...

journal_title：International journal of systematic and evolutionary microbiology

authors： Denner EBM,Vybiral D,Koblízek M,Kämpfer P,Busse HJ,Velimirov B

更新日期：2002-09-01 00:00:00

abstract：:Strain CCUG 50899, a Gram-negative, rod-shaped, non-spore-forming, motile bacterium isolated from industrial environment in Sweden and tentatively assigned to the species Ochrobactrum anthropi, was studied in order to clarify its taxonomic status. 16S rRNA gene sequence similarities placed the strain in the genus Ochr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Huber B,Scholz HC,Kämpfer P,Falsen E,Langer S,Busse HJ

更新日期：2010-02-01 00:00:00

abstract：:A novel actinobacterium, designated LHW52908T, was isolated from a marine sponge, Leucettachagosensis, collected in the South China Sea. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain LHW52908T was member of the family Geodermatophilaceae, with highest similarities to Geodermatophilus obscur...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li L,Zhang D,Tang WZ,Lin HW,Lu YH

更新日期：2019-10-01 00:00:00

abstract：:A novel aerobic, Gram-stain-positive, motile, moderately halophilic and coccoid bacterial strain, designated LCB217T, was isolated from a saline-alkali soil in north-western China and identified using a polyphasic taxonomic approach. Growth occurred with 3-15 % (w/v) NaCl (optimum 3-5 %), at 10-45 °C (optimum 30 °C) a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gan L,Zhang H,Tian J,Li X,Long X,Zhang Y,Dai Y,Tian Y

更新日期：2018-02-01 00:00:00

abstract：:A novel aerobic, gram-negative bacterial strain, designated 17X/A02/237(T), was isolated from waters of the coastal north-western Mediterranean Sea. Cells were motile straight rods and formed dark-grey colonies on marine agar medium. Strain 17X/A02/237(T) contained ubiquinone Q-8 and its major fatty acids were C(16 : ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Urios L,Intertaglia L,Lesongeur F,Lebaron P

更新日期：2011-07-01 00:00:00

abstract：:A novel strain, yH16, was isolated on nutrient agar from soil samples collected at KyungHee University, Suwon City, Republic of Korea. Cells of strain yH16(T) were short rods, Gram-negative-staining, motile and non-spore-forming, with a polar flagellum. Biochemical and molecular characterization revealed that this str...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee DG,Im DM,Kang H,Yun P,Park SK,Hyun SS,Hwang DY

更新日期：2013-01-01 00:00:00