Ornithinibacillus halophilus sp. nov., a moderately halophilic, Gram-stain-positive, endospore-forming bacterium from a hypersaline lake.

Abstract:

:A novel Gram-stain-positive, moderately halophilic bacterium, designated strain G8B(T), was isolated from water of the hypersaline lake Aran-Bidgol in Iran and characterized taxonomically using a polyphasic approach. Cells of strain G8B(T) were rod-shaped, motile and produced oval endospores at a terminal position in swollen sporangia. Strain G8B(T) was strictly aerobic, catalase-positive and oxidase-negative. The strain was able to grow at NaCl concentrations of 0.5-12.5 % (w/v), with optimum growth occurring at 5-7.5 % (w/v) NaCl. The optimum temperature and pH for growth were 35-40 °C and pH 7.5-8.0, respectively. On the basis of 16S rRNA gene sequence analysis, strain G8B(T) was shown to belong to the genus Ornithinibacillus within the phylum Firmicutes and showed closest phylogenetic similarity with Ornithinibacillus bavariensis WSBC 24001(T) (97.6 %). The DNA G+C content of strain G8B(T) was 36.9 mol%. The major cellular fatty acids of strain G8B(T) were anteiso-C15 : 0, anteiso-C17 : 0, iso-C15 : 0 and iso-C16 : 0, and its polar lipid pattern consisted of phosphatidylglycerol, diphosphatidylglycerol, four unknown phospholipids and an unknown aminolipid. The isoprenoid quinones were MK-7 (98 %) and MK-8 (2 %). Strain G8B(T) contained a peptidoglycan of type A4β, l-Orn-d-Asp. All these features confirmed the placement of isolate G8B(T) within the genus Ornithinibacillus. DNA-DNA hybridization experiments revealed a low level of relatedness (6 %) between strain G8B(T) and Ornithinibacillus bavariensis DSM 15681(T). On the basis of evidence from this study, a novel species of the genus Ornithinibacillus, Ornithinibacillus halophilus sp. nov., is proposed, with strain G8B(T) ( = IBRC-M 10683(T) = KCTC 13822(T)) as the type strain.

authors

Bagheri M,Amoozegar MA,Schumann P,Didari M,Mehrshad M,Spröer C,Sánchez-Porro C,Ventosa A

doi

10.1099/ijs.0.041350-0

subject

Has Abstract

pub_date

2013-03-01 00:00:00

pages

844-848

issue

Pt 3

eissn

1466-5026

issn

1466-5034

journal_volume

63

pub_type

杂志文章
  • International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Mollicutes: Minutes of the closed meeting, 8 July 2018, Portsmouth, New Hampshire, USA.

    abstract::This report documents the International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Mollicutes by recording the minutes of the meeting, held 8 July 2018, Portsmouth, New Hampshire, USA. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003342

    authors: May M,Brown DR

    更新日期:2019-07-01 00:00:00

  • Thalassobacillus pellis sp. nov., a moderately halophilic, Gram-positive bacterium isolated from salted hides.

    abstract::A Gram-positive, moderately halophilic and endospore-forming bacterium, designated strain 18OM(T), was isolated from salted animal hides. The cells were rods and produced ellipsoidal endospores at a terminal position. Strain 18OM(T) was motile, strictly aerobic and grew at 0.5-25 % (w/v) NaCl [optimal growth at 10 % (...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024778-0

    authors: Sánchez-Porro C,Yilmaz P,de la Haba RR,Birbir M,Ventosa A

    更新日期:2011-05-01 00:00:00

  • Alkaliphilus transvaalensis gen. nov., sp. nov., an extremely alkaliphilic bacterium isolated from a deep South African gold mine.

    abstract::A novel extreme alkaliphile was isolated from a mine water containment dam at 3.2 km below land surface in an ultra-deep gold mine near Carletonville, South Africa. The cells of this bacterium were straight to slightly curved rods, motile by flagella and formed endospores. Growth was observed over the temperature rang...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-4-1245

    authors: Takai K,Moser DP,Onstott TC,Spoelstra N,Pfiffner SM,Dohnalkova A,Fredrickson JK

    更新日期:2001-07-01 00:00:00

  • Brachybacterium hainanense sp. nov., isolated from noni (Morinda citrifolia L.) branch.

    abstract::A Gram-stain-positive bacterial strain, designated as NR2T, isolated from noni (Morinda citrifolia L.) branch was investigated using a polyphasic taxonomic approach. The cells were small coccoid to ovoid, non-spore-forming and motile. Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain was a ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000559

    authors: Liu Y,Zhai L,Yao S,Cao Y,Cao Y,Zhang X,Su J,Ge Y,Zhao R,Cheng C

    更新日期:2015-11-01 00:00:00

  • Paenibacillus gansuensis sp. nov., isolated from desert soil of Gansu Province in China.

    abstract::A Gram-positive, endospore-forming, rod-shaped bacterium, designated strain B518(T), was isolated from a desert-soil sample from Gansu Province in China. The isolate was strictly aerobic and was motile by means of several flagella. The strain grew optimally at 35-40 degrees C and at pH 7.0-7.5. The predominant fatty a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64210-0

    authors: Lim JM,Jeon CO,Lee JC,Xu LH,Jiang CL,Kim CJ

    更新日期:2006-09-01 00:00:00

  • Pseudomonas lactis sp. nov. and Pseudomonas paralactis sp. nov., isolated from bovine raw milk.

    abstract::Five strains, designated WS 4672T, WS 4998, WS 4992T, WS 4997 and WS 5000, isolated from bovine raw milk formed two individual groups in a phylogenetic analysis. The most similar species on the basis of 16S rRNA gene sequences were Pseudomonas azotoformans IAM 1603T, Pseudomonas gessardii CIP 105469T and Pseudomonas l...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001836

    authors: von Neubeck M,Huptas C,Glück C,Krewinkel M,Stoeckel M,Stressler T,Fischer L,Hinrichs J,Scherer S,Wenning M

    更新日期:2017-06-01 00:00:00

  • Chitinophaga jiangningensis sp. nov., a mineral-weathering bacterium.

    abstract::A Gram-stain-negative, rod-shaped bacterial strain, JN53(T), was isolated from the surfaces of weathered rock (potassic trachyte) from Nanjing, Jiangsu Province, PR China. Strain JN53(T) grew optimally at 30 °C, pH 7.0. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain JN53(T) belonged to th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.056721-0

    authors: Wang Q,Cheng C,He LY,Huang Z,Sheng XF

    更新日期:2014-01-01 00:00:00

  • Parasphingopyxis algicola sp. nov., isolated from a marine red alga Asparagopsis taxiformis and emended description of the genus Parasphingopyxis Uchida et al. 2012.

    abstract::An aerobic, Gram-stain-negative, yellow-pigmented bacterium, designated strain ATAX6-5T, was isolated from a marine red alga, Asparagopsistaxiformis, in South Korea. Cells were non-motile rods showing catalase- and oxidase-positive reactions. Growth of strain ATAX6-5T was observed at 5-35 °C (optimum, 30 °C), at pH 6....

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002215

    authors: Jeong SE,Kim KH,Baek K,Jeon CO

    更新日期:2017-10-01 00:00:00

  • Parvibaculum lavamentivorans gen. nov., sp. nov., a novel heterotroph that initiates catabolism of linear alkylbenzenesulfonate.

    abstract::Strain DS-1T is a small (0.8 microm in length and 0.2 microm in diameter) heterotrophic bacterium able to omega-oxygenate the commercial surfactant linear alkylbenzenesulfonate (LAS) and shorten the side chain by beta-oxidation to yield sulfophenylcarboxylates. The morphotype is widespread in cultures able to utilize ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.03020-0

    authors: Schleheck D,Tindall BJ,Rosselló-Mora R,Cook AM

    更新日期:2004-09-01 00:00:00

  • Pseudidiomarina sediminum sp. nov., a marine bacterium isolated from coastal sediments of Luoyuan Bay in China.

    abstract::A strain of heterotrophic, facultatively anaerobic, marine bacterium, designated strain c121T, was isolated from coastal sediment of Luoyuan Bay, in Fujian province, PR China. Analysis of the 16S rRNA gene sequence revealed an affiliation with the genus Pseudidiomarina; the sequence similarity between c121T and Pseudi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65199-0

    authors: Hu ZY,Li Y

    更新日期:2007-11-01 00:00:00

  • Micromonospora wenchangensis sp. nov., isolated from mangrove soil.

    abstract::An actinomycete, strain 2602GPT1-05(T), was isolated from a composite mangrove soil sample collected from Wenchang, Hainan province, China. Strain 2602GPT1-05(T) showed closest 16S rRNA gene sequence similarity to Micromonospora haikouensis 232617(T) (99.05 %), and phylogenetically clustered with Micromonospora haikou...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.045476-0

    authors: Ren J,Li L,Wei B,Tang YL,Deng ZX,Sun M,Hong K

    更新日期:2013-07-01 00:00:00

  • Proposal to correct the generic name Flaviaesturariibacter Kang, Chun, Seo, Kim and Jahng 2015, 2212 to Flavaestuariibacter. Request for an Opinion.

    abstract::The generic name Flaviaesturariibacter Kang, Chun, Seo, Kim and Jahng 2015, 2212 is malformed: being derived from the Latin noun aestuarium, …aestuarii… instead of …aesturarii… is required. Moreover, according to Appendix 9 of the Prokaryotic Code, a connecting vowel must be dropped when the following word element sta...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002256

    authors: Oren A

    更新日期:2017-09-01 00:00:00

  • Polyphasic evidence for the reclassification of Rhodothermus obamensis Sako et al. 1996 as a member of the species Rhodothermus marinus Alfredsson et al. 1988.

    abstract::DNA-DNA reassociation studies, 16S rRNA gene sequence comparisons and fatty acid analysis were used to reassess the taxonomic status of the type strain of Rhodothermus obamensis and several strains of the genus Rhodothermus isolated from widely distributed shallow marine hot springs. The results show that the type str...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-4-1457

    authors: Silva Z,Horta C,da Costa MS,Chung AP,Rainey FA

    更新日期:2000-07-01 00:00:00

  • Halorubrum aquaticum sp. nov., an archaeon isolated from hypersaline lakes.

    abstract::Two halophilic archaea, strains EN-2(T) and SH-4, were isolated from the saline lakes Erliannor and Shangmatala, respectively, in Inner Mongolia, China. Cells were strictly aerobic, motile rods. Colonies were red. Strains EN-2(T) and SH-4 were able to grow at 25-50 °C (optimum 35-40 °C), with 2.5-5.0 M NaCl (optimum 3...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.025015-0

    authors: Gutiérrez MC,Castillo AM,Corral P,Kamekura M,Ventosa A

    更新日期:2011-05-01 00:00:00

  • Deinococcus aerolatus sp. nov. and Deinococcus aerophilus sp. nov., isolated from air samples.

    abstract::Two strains of pink-coloured bacteria, 5516T-9(T) and 5516T-11(T), were isolated from an air sample collected in Korea. The taxonomic status of these novel strains was investigated by means of a polyphasic approach. The novel strains were Gram-positive, aerobic, non-spore-forming and coccus-shaped bacteria. The DNA G+...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016030-0

    authors: Yoo SH,Weon HY,Kim SJ,Kim YS,Kim BY,Kwon SW

    更新日期:2010-05-01 00:00:00

  • Ochrobactrum rhizosphaerae sp. nov. and Ochrobactrum thiophenivorans sp. nov., isolated from the environment.

    abstract::Two Gram-negative, rod-shaped, non-spore-forming bacteria, PR17(T) and DSM 7216(T), isolated from the potato rhizosphere and an industrial environment, respectively, were studied for their taxonomic allocation. By rrs (16S rRNA) gene sequencing, these strains were shown to belong to the Alphaproteobacteria, most close...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65407-0

    authors: Kämpfer P,Sessitsch A,Schloter M,Huber B,Busse HJ,Scholz HC

    更新日期:2008-06-01 00:00:00

  • Rhodoluna lacicola gen. nov., sp. nov., a planktonic freshwater bacterium with stream-lined genome.

    abstract::A pure culture of an actinobacterium previously described as 'Candidatus Rhodoluna lacicola' strain MWH-Ta8 was established and deposited in two public culture collections. Strain MWH-Ta8(T) represents a free-living planktonic freshwater bacterium obtained from hypertrophic Meiliang Bay, Lake Taihu, PR China. The stra...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.065292-0

    authors: Hahn MW,Schmidt J,Taipale SJ,Doolittle WF,Koll U

    更新日期:2014-09-01 00:00:00

  • Enterococcus ureilyticus sp. nov. and Enterococcus rotai sp. nov., two urease-producing enterococci from the environment.

    abstract::A set of 25 urease-producing, yellow-pigmented enterococci was isolated from environmental sources. Phenotypic classification divided the isolates into two phena. Both phena were characterized using 16S rRNA gene sequence analysis, DNA base composition, rep-PCR fingerprinting and automated ribotyping. The obtained dat...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.041152-0

    authors: Sedláček I,Holochová P,Mašlaňová I,Kosina M,Spröer C,Bryndová H,Vandamme P,Rudolf I,Hubálek Z,Švec P

    更新日期:2013-02-01 00:00:00

  • Tepidiforma bonchosmolovskayae gen. nov., sp. nov., a moderately thermophilic Chloroflexi bacterium from a Chukotka hot spring (Arctic, Russia), representing a novel class, Tepidiformia, which includes the previously uncultivated lineage OLB14.

    abstract::A novel aerobic moderately thermophilic bacterium, strain 3753OT, was isolated from a Chukotka hot spring (Arctic, Russia) using the newly developed technology of laser engineering of microbial systems. Сells were regular short rods, 0.4×0.8-2.0 µm in size, with a monoderm-type envelope and a single flagellum. The tem...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003902

    authors: Kochetkova TV,Zayulina KS,Zhigarkov VS,Minaev NV,Chichkov BN,Novikov AA,Toshchakov SV,Elcheninov AG,Kublanov IV

    更新日期:2020-02-01 00:00:00

  • Lactobacillus kimchicus sp. nov., a β-glucosidase-producing bacterium isolated from kimchi.

    abstract::A Gram-reaction-positive, non-spore-forming, rod-shaped, non-motile, β-glucosidase-producing bacterium, designated DCY51(T), was isolated from kimchi, a Korean fermented vegetable food. 16S rRNA gene sequence analysis revealed that strain DCY51(T) belonged to the genus Lactobacillus and exhibited highest 16S rRNA gene...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.017418-0

    authors: Liang ZQ,Srinivasan S,Kim YJ,Kim HB,Wang HT,Yang DC

    更新日期:2011-04-01 00:00:00

  • The combination Enterobacter agglomerans is to be cited as Enterobacter agglomerans (Beijerinck 1888) Ewing and Fife 1972 and the combination Pantoea agglomerans is to be cited as Pantoea agglomerans (Beijerinck 1888) Gavini et al. 1989. Opinion 90. Judic

    abstract::The Judicial Commission affirms that, according to information presented to it, the combination Enterobacter agglomerans is to be cited as Enterobacter agglomerans (Beijerinck 1888) Ewing and Fife 1972 and the combination Pantoea agglomerans is to be cited as Pantoea agglomerans (Beijerinck 1888) Gavini et al. 1989. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.069161-0

    authors: Tindall BJ

    更新日期:2014-10-01 00:00:00

  • Emticicia sediminis sp. nov. isolated from sediment of a shallow stream.

    abstract::A novel bacterial strain, designated JBR12T, was isolated from sediment of a shallow stream in Cheonan, Korea. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain JBR12T belongs to the genus Emticicia, and indicated that its closest relatives are Emticicia oligotrophica DSM 17448T (97.8 % sequenc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000292

    authors: Park SE,Lee S,Kim H,Ahn TY

    更新日期:2015-08-01 00:00:00

  • Desulfosoma caldarium gen. nov., sp. nov., a thermophilic sulfate-reducing bacterium from a terrestrial hot spring.

    abstract::A thermophilic, sulfate-reducing bacterium, designated strain USBA-053(T), was isolated from a terrestrial hot spring located at a height of 2500 m in the Colombian Andes (5° 45' 33.29″ N 73° 6' 49.89″ W), Colombia. Cells of strain USBA-053(T) were oval- to rod-shaped, Gram-negative and motile by means of a single pol...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.020586-0

    authors: Baena S,Perdomo N,Carvajal C,Díaz C,Patel BKC

    更新日期:2011-04-01 00:00:00

  • Defluviimonas aestuarii sp. nov., a marine bacterium isolated from a tidal flat, and emended description of the genus Defluviimonas Foesel et al. 2011.

    abstract::A novel Gram-staining-negative, strictly aerobic bacterium, designated BS14(T), was isolated from a marine tidal flat of the South Sea in Korea. Colonies were opaque, white, smooth and circular on marine agar. Cells were moderately halophilic, non-motile rods showing catalase- and oxidase-positive reactions. Growth of...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.048389-0

    authors: Math RK,Jin HM,Jeong SH,Jeon CO

    更新日期:2013-08-01 00:00:00

  • Flavobacterium luticocti sp. nov., isolated from wastewater.

    abstract::A Gram-stain-negative, non-spore-forming, rod-shaped and non-motile bacterium, designated strain xz20T, was isolated from the wastewater of a municipal wastewater treatment plant in Xuzhou, China. The taxonomic status of strain xz20T was determined using a polyphasic approach. Growth occurred at 15-40 °C (optimum, 25-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001634

    authors: Liu H,Lu P,Jin L,Zhu G

    更新日期:2017-02-01 00:00:00

  • Bensingtonia changbaiensis sp. nov. and Bensingtonia sorbi sp. nov., novel ballistoconidium-forming yeast species from plant leaves.

    abstract::Six ballistoconidium-forming yeast strains that were isolated from plant leaves collected on Changbai Mountain, north-east China, were assigned to the genus Bensingtonia Ingold emend. Nakase & Boekhout due to the formation of asymmetrical ballistoconidia, cream-coloured colonies and Q-9 as the major ubiquinone. Two se...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02736-0

    authors: Wang QM,Bai FY,Zhao JH,Jia JH

    更新日期:2003-11-01 00:00:00

  • Massilia lurida sp. nov., isolated from soil.

    abstract::A bacterial isolate, designated strain D5(T), was isolated from a soil sample collected from the Inner Mongolia Autonomous Region, China, and subjected to a taxonomic investigation using a polyphasic approach. Strain D5(T) was aerobic, Gram-stain-negative, rod-shaped and motile. Strain D5(T) fell within the evolutiona...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.047068-0

    authors: Luo X,Xie Q,Wang J,Pang H,Fan J,Zhang J

    更新日期:2013-06-01 00:00:00

  • Cryptococcus nemorosus sp. nov. and Cryptococcus perniciosus sp. nov., related to Papiliotrema Sampaio et al. (Tremellales).

    abstract::Three mycocinogenic strains representing the genus Cryptococcus were isolated on glucuronate agar from plants and turf collected in the Prioksko-terrasny biosphere reserve (Russia). These isolates fit the standard description of Cryptococcus laurentii, but differ from its type strain in both their mycocin-sensitivity ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02374-0

    authors: Golubev WI,Gadanho M,Sampaio JP,Golubev NW

    更新日期:2003-05-01 00:00:00

  • Paracoccus panacisoli sp. nov., isolated from a forest soil cultivated with Vietnamese ginseng.

    abstract::A novel bacterial strain, designated DCY94(T), was isolated from forest soil cultivated with ginseng in Vietnam. The strain was Gram-reaction-negative, facultatively anaerobic, non-motile, rod-shaped and catalase- and oxidase-positive. 16S rRNA gene sequence analysis demonstrated that strain DCY94(T) was closely relat...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000125

    authors: Nguyen NL,Kim YJ,Hoang VA,Tran BT,Pham HS,Yang DC

    更新日期:2015-05-01 00:00:00

  • Methylomonas lenta sp. nov., a methanotroph isolated from manure and a denitrification tank.

    abstract::Two methanotrophic bacteria, strains R-45377(T) and R-45370, were respectively isolated from a slurry pit of a cow stable and from a denitrification tank of a wastewater treatment plant in Belgium. The strains showed 99.9 % 16S rRNA gene sequence similarity. Cells were Gram-negative, motile rods containing type I meth...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.057794-0

    authors: Hoefman S,Heylen K,De Vos P

    更新日期:2014-04-01 00:00:00