Molecular phylogeny and historical biogeography of Nacella (Patellogastropoda: Nacellidae) in the Southern Ocean.

Abstract:

:The evolution and the historical biogeography of the Southern Ocean marine benthic fauna are closely related to major tectonic and climatic changes that occurred in this region during the last 55 million years (Ma). Several families, genera and even species of marine organisms are shared between distant biogeographic provinces in this region. This pattern of distribution in marine benthic invertebrates has been commonly explained by vicariant speciation due to plate tectonics. However, recent molecular studies have provided new evidence for long-distance dispersion as a plausible explanation of biogeographical patterns in the Southern Ocean. True limpets of the genus Nacella are currently distributed in different biogeographic regions of the Southern Ocean such as Antarctica, Kerguelen Province, southern New Zealand Antipodean Province, North-Central Chile and South American Magellanic Province. Here, we present phylogenetic reconstructions using two mitochondrial DNA markers (Cytochrome Oxidase I and Cytochrome b) to look into the relationships among Nacella species and to determine the origin and diversification of the genus. Phylogenies were reconstructed using two methods, Maximum Parsimony and Bayesian Inference, while divergence time among Nacella species was estimated following a relaxed Bayesian approach. For this purpose, we collected inter- and subtidal species belonging to four biogeographic regions in the Southern Ocean: Antarctica, Kerguelen Province, Central Chile, and Magellanic Province. Our molecular results agree with previous morphological and molecular studies supporting the monophyly of Nacella and its sister relationship with Cellana. Two rounds of diversification are recognized in the evolution of Nacella. The first one occurred at the end of the Miocene and gave rise to the main lineages, currently distributed in Antarctica, South America or Kerguelen Province. Large genetic divergence was detected among Nacella species from these distant biogeographic provinces emphasizing the significance of trans-oceanic discontinuities and suggesting long-distance dispersal was relatively unimportant. The second diversification round consisted of a more recent Pleistocene radiation in the Magellanic region. In this province, different morphological species of Nacella exhibit extreme low levels of genetic divergence with absence of reciprocal monophyly among them. According to our time estimation, the origin and diversification of Nacella in the Southern Ocean is more recent (<15 MY) than the expected under the hypothesis of vicariant speciation due to plate tectonics. The evolution of this genus seems to be closely related to drastic climatic and oceanographic changes in the Southern Ocean during the middle-Miocene climatic transition. In spite of the high number of species described for the Magellanic Province, molecular results indicate that these species are the most derived ones in the evolution of the genus and therefore that the Magellanic region does not need to correspond to the origin center of Nacella. The absence of genetic divergence among these species supports a very recent radiation process accompanied by rapid morphological and ecological diversification.

journal_name

Mol Phylogenet Evol

authors

González-Wevar CA,Nakano T,Cañete JI,Poulin E

doi

10.1016/j.ympev.2010.02.001

subject

Has Abstract

pub_date

2010-07-01 00:00:00

pages

115-24

issue

1

eissn

1055-7903

issn

1095-9513

pii

S1055-7903(10)00051-5

journal_volume

56

pub_type

杂志文章
  • Delineating species boundaries using an iterative taxonomic approach: the case of soldierless termites (Isoptera, Termitidae, Apicotermitinae).

    abstract::Species boundaries are traditionally inferred using morphological characters, although morphology sometimes fails to correctly delineate species. To overcome this limitation, researchers have widely taken advantage of alternative methods such as DNA barcoding or analysis of cuticular hydrocarbons (CHs) profiles, but r...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2013.07.007

    authors: Bourguignon T,Šobotník J,Hanus R,Krasulová J,Vrkoslav V,Cvačka J,Roisin Y

    更新日期:2013-12-01 00:00:00

  • Evolutionary dynamics of a cycad obligate pollination mutualism - Pattern and process in extant Macrozamia cycads and their specialist thrips pollinators.

    abstract::Obligate pollination mutualisms are rare and few have been investigated deeply. This paper focuses on one such mutualism involving thrips in the genus Cycadothrips that pollinate cycads in the genus Macrozamia. Both represent old lineages relative to insects and plants generally, are endemic to Australia, and are mutu...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2015.07.003

    authors: Brookes DR,Hereward JP,Terry LI,Walter GH

    更新日期:2015-12-01 00:00:00

  • Phylogeography of Helleria brevicornis (Crustacea, Oniscidea): old and recent differentiations of an ancient lineage.

    abstract::Helleria brevicornis has a disjunct, peri-Tyrrhenian distribution that mirrors that of several organisms, for which geographic vicariance is invoked, due to the geological events started with the Oligocene split of the Sardo-Corsican microplate from the Pyrenees, and successive separation between Sardinia and Corsica....

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2009.10.005

    authors: Gentile G,Campanaro A,Carosi M,Sbordoni V,Argano R

    更新日期:2010-02-01 00:00:00

  • A multilocus analysis provides evidence for more than one species within Eugenes fulgens (Aves: Trochilidae).

    abstract::The status of subspecies in systematic zoology is the focus of controversy. Recent studies use DNA sequences to evaluate the status of subspecies within species complexes and to recognize and delimit species. Here, we assessed the phylogenetic relationships, the taxonomic status of the proposed subspecies, and the spe...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2015.04.024

    authors: Zamudio-Beltrán LE,Hernández-Baños BE

    更新日期:2015-09-01 00:00:00

  • New insights into the phylogeny of Pleopeltis and related Neotropical genera (Polypodiaceae, Polypodiopsida).

    abstract::The fern family Polypodiaceae plays an important role in Neotropical epiphyte diversity. Most of its American representatives are assembled in a monophyletic clade that, apart from the grammitids, nearly exclusively comprises species restricted to the New World. The phylogenetic relationships of these ferns are still ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2009.05.001

    authors: Otto EM,Janssen T,Kreier HP,Schneider H

    更新日期:2009-10-01 00:00:00

  • Boreotropical range expansion and long-distance dispersal explain two amphi-Pacific tropical disjunctions in Sabiaceae.

    abstract::Sabiaceae comprises three genera and ca. 80 species with an amphi-Pacific tropical disjunct distribution. It has been unclear whether the family is monophyletic, where the family belongs within the angiosperm phylogeny, and when and how is present-day disjunct distribution originated. To address these questions, we co...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2018.03.005

    authors: Yang T,Lu LM,Wang W,Li JH,Manchester SR,Wen J,Chen ZD

    更新日期:2018-07-01 00:00:00

  • Phylogenetic position of Protoopalina intestinalis based on SSU rRNA gene sequence.

    abstract::A robust recognition of phylogenetic affinities of Opalinidae-the peculiar multinucleated intestine commensals of frogs-is hindered by the absence of reliable molecular data. Up to now all attempts to sequence opalinid genes failed, as the obtained sequences labeled as Protoopalina intestinalis, Cepedea virguloidea, a...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2004.05.009

    authors: Kostka M,Hampl V,Cepicka I,Flegr J

    更新日期:2004-10-01 00:00:00

  • Combining high-throughput sequencing and targeted loci data to infer the phylogeny of the "Adenocalymma-Neojobertia" clade (Bignonieae, Bignoniaceae).

    abstract::Combining high-throughput sequencing data with amplicon sequences allows the reconstruction of robust phylogenies based on comprehensive sampling of characters and taxa. Here, we combine Next Generation Sequencing (NGS) and Sanger sequencing data to infer the phylogeny of the "Adenocalymma-Neojobertia" clade (Bignonie...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2018.01.023

    authors: Fonseca LHM,Lohmann LG

    更新日期:2018-06-01 00:00:00

  • Molecular phylogenetics of a South Pacific sap beetle species complex (Carpophilus spp., Coleoptera: Nitidulidae).

    abstract::Several species of sap beetles in the genus Carpophilus are minor pests of fresh produce and stored products, and are frequently intercepted in biosecurity operations. In the South Pacific region, the superficially similar species C. maculatus and C. oculatus are frequently encountered in these situations. Three subsp...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2012.04.018

    authors: Brown SD,Armstrong KF,Cruickshank RH

    更新日期:2012-09-01 00:00:00

  • Phylogeography of the Galápagos hawk (Buteo galapagoensis): a recent arrival to the Galápagos Islands.

    abstract::Galápagos hawks (Buteo galapagoensis) are one of the most inbred bird species in the world, living in small, isolated island populations. We used mitochondrial sequence and nuclear minisatellite data to describe relationships among Galápagos hawk populations and their colonization history. We sampled 10 populations (e...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2005.11.014

    authors: Bollmer JL,Kimball RT,Whiteman NK,Sarasola JH,Parker PG

    更新日期:2006-04-01 00:00:00

  • Systematics and evolutionary history of butterflies in the "Taygetis clade" (Nymphalidae: Satyrinae: Euptychiina): towards a better understanding of Neotropical biogeography.

    abstract::The so-called "Taygetis clade" is a group of exclusively Neotropical butterflies classified within Euptychiina, one of the largest subtribes in the subfamily Satyrinae. Since the distribution of the ten genera belonging to this group ranges throughout the entire Neotropics, from lowlands to lower montane habitats, it ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2012.09.005

    authors: Matos-Maraví PF,Peña C,Willmott KR,Freitas AV,Wahlberg N

    更新日期:2013-01-01 00:00:00

  • Surviving the Messinian Salinity Crisis? Divergence patterns in the genus Dendropoma (Gastropoda: Vermetidae) in the Mediterranean Sea.

    abstract::Four genetically distinct clades were recently described under the name Dendropoma petraeum, a Mediterranean endemic vermetid gastropod. The aim of this work is to date the processes that drove to the diversification within this taxon and to relate them to the corresponding historical events occurred in the Mediterran...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2015.05.004

    authors: Calvo M,Alda F,Oliverio M,Templado J,Machordom A

    更新日期:2015-10-01 00:00:00

  • Phylogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North American warm regional deserts.

    abstract::Phylogeographic relationships among 26 populations from throughout the geographic range of the Peromyscus eremicus species group are described based on sequence data for a 699-bp fragment of the mitochondrial DNA COIII gene. Distance, maximum-likelihood, and maximum-parsimony analyses of phylogenetic trees generated u...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.2000.0841

    authors: Riddle BR,Hafner DJ,Alexander LF

    更新日期:2000-11-01 00:00:00

  • Molecular phylogenetics of Oestroidea (Diptera: Calyptratae) with emphasis on Calliphoridae: insights into the inter-familial relationships and additional evidence for paraphyly among blowflies.

    abstract::The superfamily Oestroidea, comprising ∼15,000 species, is a large and ecologically diverse clade within the order Diptera. Among its six commonly recognized families, Calliphoridae seems to be crucial for understanding evolutionary relationships in the group, as it is recognized as a controversial paraphyletic groupi...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2012.08.007

    authors: Marinho MA,Junqueira AC,Paulo DF,Esposito MC,Villet MH,Azeredo-Espin AM

    更新日期:2012-12-01 00:00:00

  • Molecular phylogeny of truffles (Pezizales: Terfeziaceae, Tuberaceae) derived from nuclear rDNA sequence analysis.

    abstract::Extensive morphological convergence or divergence, a common occurrence in fungi, tends to obscure recognition of phylogenetic relationships among Pezizales, widespread filamentous Ascomycetes with either enclosed underground (hypogeous) or exposed (epigeous) fruit bodies, that often establish mutualistic interactions ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1999.0638

    authors: Percudani R,Trevisi A,Zambonelli A,Ottonello S

    更新日期:1999-10-01 00:00:00

  • Generic relationships and dating of lineages in Winteraceae based on nuclear (ITS) and plastid (rpS16 and psbA-trnH) sequence data.

    abstract::Phylogenetic analyses of representative species from the five genera of Winteraceae (Drimys, Pseudowintera, Takhtajania, Tasmannia, and Zygogynum s.l.) were performed using ITS nuclear sequences and a combined data-set of ITS+psbA-trnH+rpS16 sequences (sampling of 30 and 15 species, respectively). Indel informativity ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2009.07.001

    authors: Marquínez X,Lohmann LG,Salatino ML,Salatino A,González F

    更新日期:2009-11-01 00:00:00

  • Genome-wide SNPs clarify lineage diversity confused by coloration in coralsnakes of the Micrurus diastema species complex (Serpentes: Elapidae).

    abstract::New world coralsnakes of the genus Micrurus are a diverse radiation of highly venomous and brightly colored snakes that range from North Carolina to Argentina. Species in this group have played central roles in developing and testing hypotheses about the evolution of mimicry and aposematism. Despite their diversity an...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2020.106770

    authors: Reyes-Velasco J,Adams RH,Boissinot S,Parkinson CL,Campbell JA,Castoe TA,Smith EN

    更新日期:2020-06-01 00:00:00

  • Genetic structure, phylogeography, and migration routes of Bouteloua gracilis (Kunth) Lag. ex Griffiths (Poaceae:Chloridoideae).

    abstract::Blue grama grass (Bouteloua gracilis) populations are found in widely variable environments, tolerating drought, alkaline soils and different levels of grazing. Many ploidy levels have been reported for this species that is also considered to be phenotypically plastic and morphologically variable. Recently a decline i...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2019.01.005

    authors: Avendaño-González M,Morales-Domínguez JF,Siqueiros-Delgado ME

    更新日期:2019-05-01 00:00:00

  • Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene.

    abstract::Parmeliaceae is the largest family of lichen-forming fungi with more than 2000 species and includes taxa with different growth forms. Morphology was widely employed to distinguish groups within this large, cosmopolitan family. In this study we test these morphology-based groupings using DNA sequence data from three nu...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2006.11.029

    authors: Crespo A,Lumbsch HT,Mattsson JE,Blanco O,Divakar PK,Articus K,Wiklund E,Bawingan PA,Wedin M

    更新日期:2007-08-01 00:00:00

  • Cladogenesis in a starfish species complex from southern Australia: evidence for vicariant speciation?

    abstract::DNA sequencing (cytochrome oxidase I; 82 sequences; 25 locations) of a species complex of Australian six-rayed sea-stars (genus Patiriella) reveals four well-supported mtDNA clades, corresponding to P. oriens, P. occidens, P. medius, and P. gunnii. These clades have non-random geographic distributions along an east to...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2003.11.014

    authors: Waters JM,O'Loughlin PM,Roy MS

    更新日期:2004-07-01 00:00:00

  • Phylogenetic signal in matK vs. trnK: a case study in early diverging eudicots (angiosperms).

    abstract::The matK gene has been among the most useful loci for resolving plant phylogenetic relationships at different evolutionary time-scales, but much less is known about the phylogenetic utility of the flanking trnK intron, especially for deep level phylogenetics. We compared the relative performance of matK and trnK intro...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2008.05.021

    authors: Hilu KW,Black C,Diouf D,Burleigh JG

    更新日期:2008-09-01 00:00:00

  • Support for the hypothesis of anguimorph ancestry for the suborder Serpentes from phylogenetic analysis of mitochondrial DNA sequences.

    abstract::Snakes represent one of the most ubiquitous and successful groups of terrestrial vertebrates; however, many aspects of their evolutionary relationships remain uncertain. Previous research, which utilized morphological and immunological data, has not resolved the origin of snakes or clearly delineated the relationships...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1995.1010

    authors: Forstner MR,Davis SK,Arévalo E

    更新日期:1995-03-01 00:00:00

  • Life on the rocks: Multilocus phylogeography of rock hyrax (Procavia capensis) from southern Africa.

    abstract::Understanding the role of geography and climatic cycles in determining patterns of biodiversity is important in comparative and evolutionary biology and conservation. We studied the phylogeographic pattern and historical demography of a rock-dwelling small mammal species from southern Africa, the rock hyrax Procavia c...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2017.04.006

    authors: Maswanganye KA,Cunningham MJ,Bennett NC,Chimimba CT,Bloomer P

    更新日期:2017-09-01 00:00:00

  • Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.

    abstract::Mitochondrial DNA sequences from the 12S rRNA gene, four tRNA genes, and a portion of two protein coding genes were used to investigate the relationship of myliobatoid genera. In addition, we conducted an investigation of the sister group to the freshwater stingrays by sampling additional DNA sequences from GenBank. C...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/s1055-7903(02)00442-6

    authors: Dunn KA,McEachran JD,Honeycutt RL

    更新日期:2003-05-01 00:00:00

  • Molecular phylogenetics of Caenogastropoda (Gastropoda: Mollusca).

    abstract::Caenogastropoda is the dominant group of marine gastropods in terms of species numbers, diversity of habit and habitat and ecological importance. This paper reports the first comprehensive multi-gene phylogenetic study of the group. Data were collected from up to six genes comprising parts of 18S rRNA, 28S rRNA (five ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2006.10.009

    authors: Colgan DJ,Ponder WF,Beacham E,Macaranas J

    更新日期:2007-03-01 00:00:00

  • Amphibian phylogeography in the Antipodes: Refugia and postglacial colonization explain mitochondrial haplotype distribution in the Patagonian frog Eupsophus calcaratus (Cycloramphidae).

    abstract::Climatic oscillations, heterogeneity in elevation, topographical position, and isolation time in southwestern Patagonia have been important in promoting diversification of the biota. Geological studies have shown that this region had wide ice-free areas during periods of the last glacial maximum and provided forested ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2010.11.026

    authors: Nuñez JJ,Wood NK,Rabanal FE,Fontanella FM,Sites JW Jr

    更新日期:2011-02-01 00:00:00

  • Exploring the radiation of a diverse reef fish family: phylogenetics of the damselfishes (Pomacentridae), with new classifications based on molecular analyses of all genera.

    abstract::The damselfishes (Perciformes, Pomacentridae) are an important family of marine reef fishes that occupy a range of ecological positions in the world's oceans. In order to determine the evolutionary pattern of their radiation, we used multiple methods to examine molecular data from 104 species representing all extant g...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2008.12.010

    authors: James Cooper W,Smith LL,Westneat MW

    更新日期:2009-07-01 00:00:00

  • Shark tales: a molecular species-level phylogeny of sharks (Selachimorpha, Chondrichthyes).

    abstract::Sharks are a diverse and ecologically important group, including some of the ocean's largest predatory animals. Sharks are also commercially important, with many species suffering overexploitation and facing extinction. However, despite a long evolutionary history, commercial, and conservation importance, phylogenetic...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2010.11.018

    authors: Vélez-Zuazo X,Agnarsson I

    更新日期:2011-02-01 00:00:00

  • Molecular evolution of the internal transcribed spacers (ITS1 and ITS2) and phylogenetic relationships among species of the family Cucurbitaceae.

    abstract::Phylogenetic relationships of different members of the family Cucurbitaceae were estimated from sequences of the internal transcribed spacer (ITS1 and ITS2) regions of the nuclear ribosomal RNA genes. Twenty-six species of different genera belonging to different tribes and several subtribes were analyzed. The whole IT...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1997.0465

    authors: Jobst J,King K,Hemleben V

    更新日期:1998-04-01 00:00:00

  • Full modeling versus summarizing gene-tree uncertainty: method choice and species-tree accuracy.

    abstract::With the proliferation of species-tree methods, empiricists now have to confront the daunting task of method choice. Such decisions might be made based on theoretical considerations alone. However, the messiness of real data means that theoretical ideals may not hold in practice (e.g., with convergence of complicated ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2012.07.004

    authors: Knowles LL,Lanier HC,Klimov PB,He Q

    更新日期:2012-11-01 00:00:00