Salinarimonas rosea gen. nov., sp. nov., a new member of the alpha-2 subgroup of the Proteobacteria.

Abstract:

:A Gram-negative, rod-shaped, facultatively anaerobic, halotolerant bacterial strain, designated YIM YD3(T), was isolated from a salt mine in Yunnan, south-west China. The taxonomy of strain YIM YD3(T) was investigated by a polyphasic approach. Strain YIM YD3(T) was motile, formed pink colonies and was positive for catalase and oxidase activities. Q-10 was the predominant respiratory ubiquinone. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylcholine and two unknown phospholipids. The major fatty acids (>10 % of total fatty acids) were C(18 : 1)omega7c, C(18 : 1)omega9c, C(16 : 0) and C(19 : 0) cyclo omega8c. The DNA G+C content was 71.8 mol%. Phylogenetic analysis based on 16S rRNA gene sequence comparisons showed that the isolate formed a distinct line within a clade containing the genera Balneimonas, Bosea, Chelatococcus and Microvirga in the order Rhizobiales, with highest levels of 16S RNA gene sequence similarity to the type strain of Balneimonas flocculans (93.5 %). On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain YIM YD3(T) represents a novel species in a new genus, for which the name Salinarimonas rosea gen. nov., sp. nov. is proposed, with strain YIM YD3(T) (=KCTC 22346(T)=CCTCC AA208038(T)) as the type strain.

authors

Liu JH,Wang YX,Zhang XX,Wang ZG,Chen YG,Wen ML,Xu LH,Peng Q,Cui XL

doi

10.1099/ijs.0.006981-0

subject

Has Abstract

pub_date

2010-01-01 00:00:00

pages

55-60

issue

Pt 1

eissn

1466-5026

issn

1466-5034

journal_volume

60

pub_type

杂志文章
  • Rhizobium alamii sp. nov., an exopolysaccharide-producing species isolated from legume and non-legume rhizospheres.

    abstract::A group of exopolysaccharide-producing bacteria was isolated from the root environment of Arabidopsis thaliana. The genetic diversity revealed by REP-PCR fingerprinting indicated that the isolates correspond to different strains. 16S rRNA gene sequence analysis showed that the isolates are closely related to the strai...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000521-0

    authors: Berge O,Lodhi A,Brandelet G,Santaella C,Roncato MA,Christen R,Heulin T,Achouak W

    更新日期:2009-02-01 00:00:00

  • Mycobacterium paragordonae sp. nov., a slowly growing, scotochromogenic species closely related to Mycobacterium gordonae.

    abstract::A previously undescribed, slowly growing, scotochromogenic mycobacterial strain (49061(T)) was isolated from a patient with pulmonary infections during the hsp65-sequence-based identification of Korean clinical isolates. Its 16S rRNA gene sequence was unique and the phylogenetic analysis based on 16S rRNA gene sequenc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.051540-0

    authors: Kim BJ,Hong SH,Kook YH,Kim BJ

    更新日期:2014-01-01 00:00:00

  • Vibrio hispanicus sp. nov., isolated from Artemia sp. and sea water in Spain.

    abstract::Three Gram-negative, small, motile, rod-shaped bacteria were isolated from Artemia sp. and sea water in Barcelona, Spain, during 1990 and 1991. They were fermentative, oxidase-positive, sensitive to vibriostatic agent O/129, arginine dihydrolase-positive, lysine and ornithine decarboxylase-negative and grew in the abs...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02775-0

    authors: Gomez-Gil B,Thompson FL,Thompson CC,Garcia-Gasca A,Roque A,Swings J

    更新日期:2004-01-01 00:00:00

  • Thermoflavifilum aggregans gen. nov., sp. nov., a thermophilic and slightly halophilic filamentous bacterium from the phylum Bacteroidetes.

    abstract::A strictly aerobic, thermophilic, moderately acidophilic, non-spore-forming bacterium, strain P373(T), was isolated from geothermally heated soil at Waikite, New Zealand. Cells were filamentous rods, 0.2-0.4 µm in diameter and grew in chains up to 80 µm in length. On the basis of 16S rRNA gene sequence similarity, str...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.057463-0

    authors: Anders H,Dunfield PF,Lagutin K,Houghton KM,Power JF,MacKenzie AD,Vyssotski M,Ryan JLJ,Hanssen EG,Moreau JW,Stott MB

    更新日期:2014-04-01 00:00:00

  • Haloferax sulfurifontis sp. nov., a halophilic archaeon isolated from a sulfide- and sulfur-rich spring.

    abstract::A pleomorphic, extremely halophilic archaeon (strain M6(T)) was isolated from a sulfide- and sulfur-rich spring in south-western Oklahoma (USA). It formed small (0.8-1.0 mm), salmon pink, elevated colonies on agar medium. The strain grew in a wide range of NaCl concentrations (6 % to saturation) and required at least ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63211-0

    authors: Elshahed MS,Savage KN,Oren A,Gutierrez MC,Ventosa A,Krumholz LR

    更新日期:2004-11-01 00:00:00

  • Chryseobacterium aquaticum sp. nov., isolated from a water reservoir.

    abstract::Strains 10-46(T) and 10-106 were isolated from a water reservoir in Korea. They were Gram-negative, non-motile, non-spore-forming rods, produced yellow-pigmented colonies on nutrient agar, contained MK-6 as the predominant menaquinone and 15 : 0 iso and 17 : 0 iso 3-OH as the major fatty acids and had polar lipid prof...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65491-0

    authors: Kim KK,Lee KC,Oh HM,Lee JS

    更新日期:2008-03-01 00:00:00

  • Cupidesulfovibrio liaohensis gen. nov., sp. nov., a novel sulphate-reducing bacterium isolated from an oil reservoir and reclassification of Desulfovibrio oxamicus and Desulfovibrio termitidis as Cupidesulfovibrio oxamicus comb. nov. and Cupidesulfovibrio

    abstract::A novel sulphate-reducing, Gram-stain-negative, anaerobic strain, isolate XJ01T, recovered from production fluid at the LiaoHe oilfield, PR China, was the subject of a polyphasic study. The isolate together with Desulfovibrio oxamicus NCIMB 9442T and Desulfovibrio termitidis DSM 5308T formed a distinct, well-supported...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004618

    authors: Wan YY,Luo N,Liu XL,Lai QL,Goodfellow M

    更新日期:2021-01-06 00:00:00

  • Sphingobium baderi sp. nov., isolated from a hexachlorocyclohexane dump site.

    abstract::A Gram-stain-negative, rod-shaped and white-coloured bacterial strain, designated LL03(T), was isolated from hexachlorocyclohexane-contaminated soil at Spolana Neratovice, Czech Republic, where lindane was formerly produced. Strain LL03(T) was found to be a degrader of α-, γ- and δ-isomers of hexachlorocyclohexane, al...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.039834-0

    authors: Kaur J,Moskalikova H,Niharika N,Sedlackova M,Hampl A,Damborsky J,Prokop Z,Lal R

    更新日期:2013-02-01 00:00:00

  • Roseitalea porphyridii gen. nov., sp. nov., isolated from a red alga, and reclassification of Hoeflea suaedae Chung et al. 2013 as Pseudohoeflea suaedae gen. nov., comb. nov.

    abstract::A Gram-staining-negative, strictly aerobic bacterial strain, designated MA7-20T, was isolated from a marine alga, Porphyridium marinum, in Korea. Cells showing oxidase-positive and catalase-positive activities were motile rods with bipolar flagella. Growth of strain MA7-20T was observed at 15-45 °C (optimum, 30-37 °C)...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001633

    authors: Hyeon JW,Jeong SE,Baek K,Jeon CO

    更新日期:2017-02-01 00:00:00

  • Altererythrobacter aquaemixtae sp. nov., isolated from the junction between the ocean and a freshwater spring.

    abstract::A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, designated JSSK-8T, was isolated from the place where the ocean and a freshwater spring meet at Jeju Island, South Korea. Strain JSSK-8T grew optimally at pH 7.0-8.0, at 30 °C and in the presence of 2.0 % (w/v) NaCl. In a neighbour-jo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002136

    authors: Park S,Jung YT,Choi SJ,Yoon JH

    更新日期:2017-09-01 00:00:00

  • Polaribacter haliotis sp. nov., isolated from the gut of abalone Haliotis discus hannai.

    abstract::A Gram-stain-negative, aerobic, non-motile and coccoid, ovoid or rod-shaped bacterial strain, designated RA4-7T, was isolated from the gut of an abalone (Haliotis discus hannai) collected from the sea around Jeju island, South Korea, and subjected to a polyphasic taxonomic study. RA4-7T grew optimally at 25 °C, at pH ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001557

    authors: Kim YO,Park IS,Park S,Nam BH,Park JM,Kim DG,Yoon JH

    更新日期:2016-12-01 00:00:00

  • Altererythrobacter salegens sp. nov., a slightly halophilic bacterium isolated from surface sediment.

    abstract::A Gram-negative, rod-shaped and slightly halophilic bacterium, strain XY-R17T, was isolated from the surface sediment of Mai Po Inner Deep Bay Ramsar Site birdwatch in Hong Kong. The 16S rRNA gene sequence of strain XY-R17T exhibited 96.5 % similarity to that of the type strain of Altererythrobacter atlanticus. Optima...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001708

    authors: Liang X,Lin H,Wang K,Liao Y,Lai Q,Xu Y,Wang C

    更新日期:2017-04-01 00:00:00

  • Halofilum ochraceum gen. nov., sp. nov., a gammaproteobacterium isolated from a marine solar saltern.

    abstract::A Gram-stain-negative, oxidase-negative, catalase-positive, facultative anaerobe, designated XJ16T, was isolated from a marine solar saltern on the coast of Weihai, China. Cells of strain XJ16T were long and rod-shaped. The colonies were ochre in colour and were able to reduce nitrate to nitrite. Optimal growth occurr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001718

    authors: Xia J,Zhao JX,Sang J,Chen GJ,Du ZJ

    更新日期:2017-04-01 00:00:00

  • Eionea nigra gen. nov., sp. nov., a gammaproteobacterium from the Mediterranean Sea.

    abstract::A novel aerobic, gram-negative bacterial strain, designated 17X/A02/237(T), was isolated from waters of the coastal north-western Mediterranean Sea. Cells were motile straight rods and formed dark-grey colonies on marine agar medium. Strain 17X/A02/237(T) contained ubiquinone Q-8 and its major fatty acids were C(16 : ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.023952-0

    authors: Urios L,Intertaglia L,Lesongeur F,Lebaron P

    更新日期:2011-07-01 00:00:00

  • Halococcus dombrowskii sp. nov., an archaeal isolate from a Permian alpine salt deposit.

    abstract::Several extremely halophilic coccoid archaeal strains were isolated from pieces of dry rock salt that were obtained three days after blasting operations in an Austrian salt mine. The deposition of the salt is thought to have occurred during the Permian period (225-280 million years ago). On the basis of their polar-li...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-5-1807

    authors: Stan-Lotter H,Pfaffenhuemer M,Legat A,Busse HJ,Radax C,Gruber C

    更新日期:2002-09-01 00:00:00

  • Lewinella agarilytica sp. nov., a novel marine bacterium of the phylum Bacteroidetes, isolated from beach sediment.

    abstract::A Gram-negative, aerobic, light-orange-coloured, marine bacterium (designated SST-19(T)) was isolated from beach sediment in Jeju, Korea, and its taxonomic position was determined by means of a polyphasic approach. In a neighbour-joining phylogenetic tree based on 16S rRNA gene sequences, strain SST-19(T) was position...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65254-0

    authors: Lee SD

    更新日期:2007-12-01 00:00:00

  • List of new names and new combinations previously effectively, but not validly, published.

    abstract::The purpose of this announcement is to effect the valid publication of the following effectively published new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists shoul...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65794-0

    authors:

    更新日期:2008-01-01 00:00:00

  • Indibacter alkaliphilus gen. nov., sp. nov., an alkaliphilic bacterium isolated from a haloalkaline lake.

    abstract::A novel Gram-stain-negative, rod-shaped, non-motile bacterium, strain LW1(T), was isolated from a water sample collected at a depth of 3.5 m from Lonar Lake, Buldhana district, Maharashtra, India. The cell suspension was reddish-orange due to the presence of carotenoids. Strain LW1(T) was positive for catalase, oxidas...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.014076

    authors: Anil Kumar P,Srinivas TN,Madhu S,Manorama R,Shivaji S

    更新日期:2010-04-01 00:00:00

  • Rhizomicrobium electricum sp. nov., a facultatively anaerobic, fermentative, prosthecate bacterium isolated from a cellulose-fed microbial fuel cell.

    abstract::A facultatively anaerobic, prosthecate bacterium, strain Mfc52(T), was isolated from a microbial fuel cell inoculated with soil and fed with cellulose as the sole fuel. Cells were Gram-negative, non-spore-forming, straight or slightly curved rods, and some of them had one or two polar prosthecae (stalks). Cells reprod...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.023580-0

    authors: Kodama Y,Watanabe K

    更新日期:2011-08-01 00:00:00

  • Loktanella maricola sp. nov., isolated from seawater of the East Sea in Korea.

    abstract::A Gram-negative, non-motile and rod-shaped Loktanella-like bacterial strain, DSW-18(T), was isolated from seawater of the East Sea, Korea, and its exact taxonomic position was investigated by using a polyphasic approach. Strain DSW-18(T) grew optimally at pH 7.0-8.0 and 25 degrees C in the presence of 2 % (w/v) NaCl. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65050-0

    authors: Yoon JH,Kang SJ,Lee SY,Oh TK

    更新日期:2007-08-01 00:00:00

  • Flexivirga caeni sp. nov., isolated from activated sludge.

    abstract::A Gram-stain-positive, strictly aerobic, non-motile, non-spore-forming and oval-shaped bacterium, designated strain BO-16T was isolated from activated sludge. In this study, we describe the taxonomic characterization and classification of this bacterium by using the polyphasic approach. Growth of BO-16T was observed a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003910

    authors: Keum DH,Lee YJ,Lee SY,Im WT

    更新日期:2020-02-01 00:00:00

  • Reclassification of Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus as Archangium disciforme comb. nov., Archangium minus comb. nov. and Archangium violaceum comb. nov., unification of the families Archangiaceae and Cystobacteraceae,

    abstract::The species Archangium gephyra, Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus are currently classified in three different genera of the order Myxococcales. The 16S rRNA gene sequences of the respective type strains show a similarity higher than 98.4 % and form a tight phylogenetic group. A dendr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000533

    authors: Lang E,Schumann P,Tindall BJ,Mohr KI,Spröer C

    更新日期:2015-11-01 00:00:00

  • Olivibacter soli sp. nov., Olivibacter ginsengisoli sp. nov. and Olivibacter terrae sp. nov., from soil of a ginseng field and compost in South Korea.

    abstract::Three novel strains, designated Gsoil 034T, Gsoil 060T and Jip13T, isolated from soil from a ginseng field and compost in South Korea, were characterized using a polyphasic approach to clarify their taxonomic positions. These isolates were found to be Gram-negative, aerobic and heterotrophic, non-spore-forming, non-mo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65299-0

    authors: Wang L,Ten LN,Lee HG,Im WT,Lee ST

    更新日期:2008-05-01 00:00:00

  • Phylogenetic analysis of gastric and enterohepatic Helicobacter species based on partial HSP60 gene sequences.

    abstract::Analysis of 16S rRNA gene sequences has been the method generally used to study the evolution and phylogeny of bacteria. Phylogenetic analysis of the 16S rRNA gene has shown the position of the genus Helicobacter in the epsilon-subclass of the Proteobacteria. Because 16S rRNA-based phylogeny does not always correspond...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02839-0

    authors: Mikkonen TP,Kärenlampi RI,Hänninen ML

    更新日期:2004-05-01 00:00:00

  • Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of the phylum Bacteroidetes, isolated from a marine-sediment fuel cell.

    abstract::A Gram-negative, non-motile, filamentous, rod-shaped, non-spore-forming bacterium (strain F2(T)) was isolated from the surface of an electricity-harvesting electrode incubated in marine sediments. Strain F2(T) does not contain c-type cytochromes, flexirubin or carotenoids. It is a facultative anaerobe that can ferment...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64296-0

    authors: Holmes DE,Nevin KP,Woodard TL,Peacock AD,Lovley DR

    更新日期:2007-04-01 00:00:00

  • Microbacterium hydrothermale sp. nov., an actinobacterium isolated from hydrothermal sediment.

    abstract::A Gram-stain-positive, aerobic, non-motile, rod-shaped bacterium, strain 0704C9-2(T), was isolated from hydrothermal sediment of the Indian Ocean. The organism grew with 0-5% (w/v) NaCl and at 10-37 °C, with optimal growth occurring with 1% NaCl and at 28-30 °C. Comparative 16S rRNA gene sequence analysis revealed tha...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.061697-0

    authors: Zhang Y,Ren H,Zhang G

    更新日期:2014-10-01 00:00:00

  • Thermus arciformis sp. nov., a thermophilic species from a geothermal area.

    abstract::Two aerobic, Gram-negative, non-motile, non-sporulating, yellow-pigmented bacteria, strains TH92(T) and TH91, were isolated from a hot spring located in Laibin, Guangxi, in the south-eastern geothermal area of China. The isolates grew at 40-77 degrees C (optimally at 70 degrees C) and at pH 6.0-9.5 (optimally at pH 7....

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.007690-0

    authors: Zhang XQ,Ying Y,Ye Y,Xu XW,Zhu XF,Wu M

    更新日期:2010-04-01 00:00:00

  • Pontivivens insulae gen. nov., sp. nov., isolated from seawater.

    abstract::A Gram-stain-negative, aerobic, non-motile and coccoid, ovoid or rod-shaped bacterial strain, designated GYSW-23(T), was isolated from seawater off Geoje island in the South Sea, South Korea. Strain GYSW-23(T) grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of approximately 2.0-3.0% (w/v) NaCl. Phylogenetic...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000352

    authors: Park S,Won SM,Park JM,Jung YT,Yoon JH

    更新日期:2015-09-01 00:00:00

  • Prevotella aurantiaca sp. nov., isolated from the human oral cavity.

    abstract::Two anaerobic, pigmented, non-spore-forming, Gram-stain-negative, rod-shaped strains isolated from the human oral cavity, OMA31(T) and OMA130, were characterized by determining their phenotypic and biochemical features, cellular fatty acid profiles and phylogenetic positions based on 16S rRNA gene sequence analysis. 1...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.012831-0

    authors: Sakamoto M,Suzuki N,Okamoto M

    更新日期:2010-03-01 00:00:00

  • Lactobacillus pobuzihii sp. nov., isolated from pobuzihi (fermented cummingcordia).

    abstract::Twenty-one homofermentative lactic acid bacteria were isolated from fermented cummingcordia (pobuzihi), a traditional food in Taiwan. The isolates had identical 16S rRNA gene sequences that were distinct from those of other lactobacilli, and their closest neighbours in the 16S rRNA gene sequence phylogenetic tree were...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016873-0

    authors: Chen YS,Miyashita M,Suzuki KI,Sato H,Hsu JS,Yanagida F

    更新日期:2010-08-01 00:00:00