Permutation test following covariate-adaptive randomization in randomized controlled trials.

Abstract:

:In randomized controlled trials, patients are recruited and randomly allocated to treatments. Patients are never randomly sampled from large population of patients on treatments under study. Therefore, it is important to consider the design and statistical analysis based on the randomization model. In this article, we show theoretically that a permutation test based on the difference in means is identical to analysis of covariance if marginal covariate balance is completely attained. Our theoretical results and Monte Carlo simulation study suggest that the permutation test following Pocock-Simon's covariate-adaptive randomization can be a useful alternative to traditional population-based tests in a confirmatory randomized controlled trial with important prognostic factors. The proposed procedure is illustrated with modified data from the randomized placebo-controlled trial of pirfenidone.

journal_name

J Biopharm Stat

authors

Hasegawa T,Tango T

doi

10.1080/10543400802527908

subject

Has Abstract

pub_date

2009-01-01 00:00:00

pages

106-19

issue

1

eissn

1054-3406

issn

1520-5711

pii

907422332

journal_volume

19

pub_type

杂志文章
  • Assessment of antitumor activity for tumor xenograft studies using exponential growth models.

    abstract::In preclinical tumor xenograft experiments, the antitumor activity of the tested agents is often assessed by endpoints such as tumor doubling time, tumor growth delay (TGD), and log10 cell kill (LCK). In tumor xenograft literature, the values of these endpoints are presented without any statistical inference, which ig...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2010.481802

    authors: Wu J

    更新日期:2011-05-01 00:00:00

  • On sample size determination in multi-armed confirmatory adaptive designs.

    abstract::An important application of confirmatory adaptive designs is the data-driven selection of treatment arms in multi-armed trials. A general methodology for adaptive designs is based on the combination testing principle. Using this principle, selection of treatment arms in multi-armed designs, recalculation of sample siz...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2011.551336

    authors: Wassmer G

    更新日期:2011-07-01 00:00:00

  • Sample size considerations for historical control studies with survival outcomes.

    abstract::Historical control trials (HCTs) are frequently conducted to compare an experimental treatment with a control treatment from a previous study, when they are applicable and favored over a randomized clinical trial (RCT) due to feasibility, ethics and cost concerns. Makuch and Simon developed a sample size formula for h...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2015.1052495

    authors: Zhu H,Zhang S,Ahn C

    更新日期:2016-01-01 00:00:00

  • Multiple testing of noninferiority hypotheses in active controlled trials.

    abstract::For noninferiority testing with the maximum allowable noninferiority margin being prespecified, one can perform valid statistical testing at the same alpha level for multiple noninferiority hypotheses with margins being smaller than this maximum margin. This is easily comprehensible because only one confidence level i...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-120037183

    authors: Hung HM,Wang SJ

    更新日期:2004-05-01 00:00:00

  • Modeling the covariance structure in pharmacokinetic crossover trials.

    abstract::Pharmacokinetic studies of drug and metabolite concentrations in the blood are usually conducted as crossover trials, especially in phases I and II. A longitudinal series of measurements is collected on each subject within each period. However, much of the dependence among such observations, within and between periods...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-100101186

    authors: Lindsey JK,Wang J,Byrom WD,Jones B

    更新日期:1999-08-01 00:00:00

  • Bayesian approach for cure models with a change-point based on covariate threshold: application to breast cancer data.

    abstract::In this study, a Bayesian approach was suggested to estimate a change-point according to a covariate threshold when some patients never experienced the event of interest. Gibbs sampler algorithm with latent binary cure indicators was used to simplify the implementation of Markov chain Monte Carlo method. Then, the acc...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2019.1632877

    authors: Shamsi F,Baghestani AR,Binesh F

    更新日期:2020-03-01 00:00:00

  • Bayesian pooling versus sequential integration of small preclinical trials: a comparison within linear and nonlinear modeling frameworks.

    abstract::Bayesian sequential integration is an appealing approach in drug development, as it allows to recursively update posterior distributions as soon as new data become available, thus considerably reducing the computation time. However, preclinical trials are often characterized by small sample sizes, which may affect the...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2020.1776312

    authors: La Gamba F,Jacobs T,Serroyen J,Geys H,Faes C

    更新日期:2020-06-18 00:00:00

  • Assessment of selection bias in estimates of relative bioavailability and intrasubject variability from bioequivalence evaluations.

    abstract::The outcome selection of bioequivalence evaluations for abbreviated new drug applications results in bias towards unity of test-reference ratio estimates, and underestimation of intrasubject variability for the test drug product. In this study, the selection bias in the estimates of testreference ratio and intrasubjec...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-100102503

    authors: Wang Y

    更新日期:2000-08-01 00:00:00

  • Interval estimation of the proportion ratio in repeated binary measurements under a stratified randomized clinical trial with noncompliance.

    abstract::The proportion ratio (PR) of a positive response between an experimental treatment and a standard treatment (or placebo) is often used to measure the relative treatment efficacy in a randomized clinical trial (RCT). For ethical reasons, it is almost inevitable to encounter some patients not complying with their assign...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2010.508139

    authors: Lui KJ,Chang KC

    更新日期:2012-01-01 00:00:00

  • Sample size determination for Bayesian analysis of small n sequential, multiple assignment, randomized trials (snSMARTs) with three agents.

    abstract::The small n, Sequential, Multiple Assignment, Randomized Trial (snSMART) is a two-stage clinical trial design for rare diseases motivated by the comparison of three active treatments for isolated skin vasculitis in the ongoing clinical trial ARAMIS (a randomized multicenter study for isolated skin vasculitis, NCT09239...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2020.1815032

    authors: Wei B,Braun TM,Tamura RN,Kidwell K

    更新日期:2020-09-06 00:00:00

  • Dose-time-response modeling using negative binomial distribution.

    abstract::People exposed to certain diseases are required to be treated with a safe and effective dose level of a drug. In epidemiological studies to find out an effective dose level, different dose levels are applied to the exposed and a certain number of cures is observed. Negative binomial distribution is considered to fit o...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2013.834916

    authors: Roy M,Choudhury K,Islam MM,Matin MA

    更新日期:2013-01-01 00:00:00

  • Using graphical displays of exact overall significance levels as a guideline for choosing a significance level for pairwise comparisons of a dichotomous variable.

    abstract::Exact overall significance levels for selected sample sizes and response probabilities are graphically displayed when a dichotomous variable is compared between a placebo and two or more active treatments. A Z-statistic with a pooled variance estimator is used as the test statistic and critical values are based on the...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-120024207

    authors: Whaley FS

    更新日期:2003-11-01 00:00:00

  • A group sequential approach to crossover trials for average bioequivalence.

    abstract::Group sequential methods to allow the possibility of early termination of a trial due to sufficiently convincing results are a standard in therapeutic clinical trials but have been little considered in bioequivalence trials. We investigate the statistical properties of one group sequential approach to bioequivalence t...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543409708835171

    authors: Hauck WW,Preston PE,Bois FY

    更新日期:1997-03-01 00:00:00

  • Optimal two-stage randomized multinomial designs for Phase II oncology trials.

    abstract::A new two-stage design is proposed that is suitable for early detection of the anticancer activity of experimental therapies in Phase II oncology trials. The endpoints of interest are response rate and early progression rate. The anticancer activity is defined by a positive signal in one endpoint and a non-negative si...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543400902802417

    authors: Sun LZ,Chen C,Patel K

    更新日期:2009-01-01 00:00:00

  • Mixed-effects varying-coefficient model with skewed distribution coupled with cause-specific varying-coefficient hazard model with random-effects for longitudinal-competing risks data analysis.

    abstract::It is well known that there is strong relationship between HIV viral load and CD4 cell counts in AIDS studies. However, the relationship between them changes during the course of treatment and may vary among individuals. During treatments, some individuals may experience terminal events such as death. Because the term...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2015.1052493

    authors: Lu T,Wang M,Liu G,Dong GH,Qian F

    更新日期:2016-01-01 00:00:00

  • Statistical test for evaluation of biosimilarity in variability of follow-on biologics.

    abstract::As more biologic products are going off patent protection, the development of follow-on biologics products has received much attention from both biotechnology industry and the regulatory agencies. Unlike small-molecule drug products, the development of biologic products is very different and variable via the manufactu...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章,评审

    doi:10.1080/10543400903367097

    authors: Hsieh TC,Chow SC,Liu JP,Hsiao CF,Chi E

    更新日期:2010-01-01 00:00:00

  • On identifying effective and superior drug combinations via Holm's procedure based on the min tests.

    abstract::In this paper I consider a problem of identifying all effective and superior drug combinations. I formulate this problem in terms of a family of hypotheses and propose a two-stage method to solve it. The first stage uses individual p-values obtained via the Min tests, whereas Holm's approach is employed in the second ...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543400802622469

    authors: Soulakova JN

    更新日期:2009-01-01 00:00:00

  • Balancing statistical and ethical considerations in planning clinical trials: recommendations for response-adaptive randomization urn designs.

    abstract::During a clinical trial, balancing statistical and ethical considerations are important. Response-adaptive randomization methods use the information from past patients to increase the probability of the next patient receiving the better treatment while avoiding the statistical concern of selection bias. We compared th...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2018.1437172

    authors: Piccorelli AV,Fraker SA

    更新日期:2018-01-01 00:00:00

  • Crossover versus parallel designs: dose-escalation design comparisons for first-in-human studies.

    abstract::We study the statistical efficiency for rising-dose designs in the context of first-in-human studies. Specifically, we identify a class of crossover designs that are appealing in terms of both subject safety and statistical efficiency and, for a three-period, two-panel design in such a class, we compare its A-efficien...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2013.792827

    authors: Yan Z,Hosmane B,Locke C

    更新日期:2013-01-01 00:00:00

  • Testing for group structure in high-dimensional data.

    abstract::With the use of finite mixture models for the clustering of a data set, the crucial question of how many clusters there are in the data can be addressed by testing for the smallest number of components in the mixture model compatible with the data. We investigate the performance of a resampling approach to this latter...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2011.608342

    authors: McLachlan GJ,Rathnayake SI

    更新日期:2011-11-01 00:00:00

  • Measuring parallelism, linearity, and relative potency in bioassay and immunoassay data.

    abstract::There is often a need to determine parallelism or linearity between pairs of dose-response data sets for various biological applications. This article describes a technique based on a modification of the well-known extra-sum-of-squares principle of statistical regression. The standard extra-sum-of-squares method uses ...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-200056532

    authors: Gottschalk PG,Dunn JR

    更新日期:2005-01-01 00:00:00

  • Two-stage optimal designs based on exact variance for a single-arm trial with survival endpoints.

    abstract::Sample size calculation based on normal approximations is often associated with the loss of statistical power for a single-arm trial with a time-to-event endpoint. Recently, Wu (2015) derived the exact variance for the one-sample log-rank test under the alternative and showed that a single-arm one-stage study based on...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2020.1730869

    authors: Shan G

    更新日期:2020-09-02 00:00:00

  • Substantial evidence of effect.

    abstract::Pressures for rapid drug development, especially for treatments that may affect public health significantly, drive a need to reconsider what is necessary to establish the "substantial evidence" of efficacy and safety required for regulatory approval. The concept of substantial evidence of effect can be stated fairly s...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/bip-120005740

    authors: Gould AL

    更新日期:2002-02-01 00:00:00

  • Robust small-sample inference for fixed effects in general Gaussian linear models.

    abstract::Although asymptotically, the empirical covariance estimator is consistent and robust with respect to the selection of the working correlation matrix, when the sample size is small, its bias may not be negligible. This article proposes a small sample correction for the empirical covariance estimator in general Gaussian...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2011.557792

    authors: Fan C,Zhang D,Zhang CH

    更新日期:2012-01-01 00:00:00

  • Wilcoxon-Mann-Whitney test: stratify or not?

    abstract::The Wilcoxon-Mann-Whitney (WMW) test is the most commonly used nonparametric method to compare two treatments when the underlying distribution of the outcome variable is not normally distributed. In the presence of stratum effects, the van Elteren (vE) test, a stratified WMW test, can be used to adjust for the stratum...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543400802369103

    authors: Qu Y,Zhao YD,Rahardja D

    更新日期:2008-01-01 00:00:00

  • Modeling anti-KLH ELISA data using two-stage and mixed effects models in support of immunotoxicological studies.

    abstract::During preclinical drug development, the immune system is specifically evaluated after prolonged treatment with drug candidates, because the immune system may be an important target system. The response of antibodies against a T-cell-dependent antigen is recommenced by the FDA and EMEA for the evaluation of immunosupp...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:

    authors: Shkedy Z,Straetemans R,Molenberghs G,Desmidt M,Vinken P,Goeminne N,Coussement W,Van Den Poel B,Bijnens L

    更新日期:2005-01-01 00:00:00

  • Statistical methods to analyze adverse events data of randomized clinical trials.

    abstract::The adverse events data of randomized clinical trials are often analyzed based on either crude incidence rates or exposure-adjusted incidence rates. These rates do not adequately account for an individual patient's profile of adverse events over the study period when an individual may remain in the trial after experie...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543400903105463

    authors: Siddiqui O

    更新日期:2009-09-01 00:00:00

  • Simultaneous confidence interval methods for analytical similarity assessment.

    abstract::In analytical similarity assessment of a biosimilar product, key quality attributes of the test and reference products need to be shown statistically similar. When there were multiple references, similarity among the reference products is also required. We proposed a simultaneous confidence approach based on the fiduc...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1080/10543406.2019.1657142

    authors: Zheng J,Yin D,Yuan M,Chow SC

    更新日期:2019-01-01 00:00:00

  • Detection of activity centers in cellular pathways using transcript profiling.

    abstract::We present a new computational method for identifying regulated pathway components in transcript profiling (TP) experiments by evaluating transcriptional activity in the context of known biological pathways. We construct a graph representing thousands of protein functional relationships by integrating knowledge from p...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-200025678

    authors: Pradines J,Rudolph-Owen L,Hunter J,Leroy P,Cary M,Coopersmith R,Dancik V,Eltsefon Y,Farutin V,Leroy C,Rees J,Rose D,Rowley S,Ruttenberg A,Wieghardt P,Sander C,Reich C

    更新日期:2004-08-01 00:00:00

  • Mixed-effect models to assess consistency and reliability across multiple evaluations.

    abstract::The issue of consistency and reliability arises frequently in applied clinical trials, and there is a considerable amount of literature on this topic. For a continuous random variable, we describe a process to assess whether the mean and variance are the same from one evaluation to the other and we derive the intracla...

    journal_title:Journal of biopharmaceutical statistics

    pub_type: 杂志文章

    doi:10.1081/BIP-120022773

    authors: Kao TC,Sparling Y,Rochon J

    更新日期:2003-08-01 00:00:00