Further delineation of complex chromosomal rearrangements in fertile male using multicolor banding.

Abstract:

BACKGROUND:Complex chromosomal rearrangements (CCRs) are defined as structural chromosomal rearrangements with at least three breakpoints and exchange of genetic material between two or more chromosomes. Complex chromosomal translocations are rarely seen in the general population but the frequency of occurrence is anticipated to be much higher due balanced states with no phenotypic presentation. Here, we report a severely mentally retarded fertile male patient in whom further delineation of CCR involving chromosomes 1, 4 and 2 was carried out by using high resolution multicolor banding (MCB) technique. As a FISH based novel chromosome banding approach, high resolution MCB allows for the differentiation of chromosome region specific areas at band and subband levels. RESULTS:Cytogenetic studies using high resolution banding of the proband necessitated further delineation of the breakpoints because of their uncertainty: 46,XY,t(1;4;2)(p21~31;q31.3;q31). After using high resolution MCB based on microdissection derived region-specific libraries, the exact nature of chromosomal rearrangements for chromosomes 1, 2 and 4 were revealed and these breakpoints were located on 1p31.1, 1q24.3 and 4q31.3 giving rise to a balanced situation. CONCLUSION:Further delineations are certainly required to provide detailed information about the relationship between balanced CCRs and their phenotypes in order to offer proper counseling to the families concerned. Carriers must be investigated with high resolution banding and molecular cytogenetic techniques to determine the exact locations of the breakpoints. High resolution MCB is an alternative and an efficient method to other FISH based chromosome banding techniques and can serve in clarifying the nature of CCR.

journal_name

Mol Cytogenet

journal_title

Molecular cytogenetics

authors

Karadeniz N,Mrasek K,Weise A

doi

10.1186/1755-8166-1-17

subject

Has Abstract

pub_date

2008-08-07 00:00:00

pages

17

issn

1755-8166

pii

1755-8166-1-17

journal_volume

1

pub_type

杂志文章
  • Derivative chromosomes involving 5p large rearranged segments went unnoticed with the use of conventional cytogenetics.

    abstract:Background:In countries where comparative genomic hybridization arrays (aCGH) and next generation sequencing are not widely available due to accessibility and economic constraints, conventional 400-500-band karyotyping is the first-line choice for the etiological diagnosis of patients with congenital malformations and ...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-018-0374-4

    authors: Yokoyama E,Del Castillo V,Sánchez S,Ramos S,Molina B,Torres L,Navarro MJ,Avila S,Castrillo JL,García-De Teresa B,Asch B,Frías S

    更新日期:2018-05-09 00:00:00

  • Microdeletions in 9q33.3-q34.11 in five patients with intellectual disability, microcephaly, and seizures of incomplete penetrance: is STXBP1 not the only causative gene?

    abstract:BACKGROUND:Most microdeletions involving chromosome sub-bands 9q33.3-9q34.11 to this point have been detected by analyses focused on STXBP1, a gene known to cause early infantile epileptic encephalopathy 4 and other seizure phenotypes. Loss-of-function mutations of STXBP1 have also been identified in some patients with...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-015-0178-8

    authors: Ehret JK,Engels H,Cremer K,Becker J,Zimmermann JP,Wohlleber E,Grasshoff U,Rossier E,Bonin M,Mangold E,Bevot A,Schön S,Heilmann-Heimbach S,Dennert N,Mathieu-Dramard M,Lacaze E,Plessis G,de Broca A,Jedraszak G,Röthlis

    更新日期:2015-09-29 00:00:00

  • Hyperdiploidy associated with T315I mutation in BCR-ABL kinase domain in an accelerated phase-chronic myeloid leukemia case.

    abstract:BACKGROUND:Chronic myeloid leukemia (CML) is genetically characterized by the occurrence of a reciprocal translocation t(9;22)(q34;q11), resulting in a BCR/ABL gene fusion on the derivative chromosome 22, i.e. the Philadelphia (Ph) chromosome. During CML progression 60-80% of the cases acquire additional genetic change...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-014-0089-0

    authors: Al-Achkar W,Moassass F,Ikhtiar A,Liehr T,Othman MA,Wafa A

    更新日期:2014-11-29 00:00:00

  • Frequency of the 7q11.23 inversion polymorphism in transmitting parents of children with Williams syndrome and in the general population does not differ between North America and Europe.

    abstract:: Inversion of the Williams syndrome (WS) region on chromosome 7q11.23 has previously been shown to occur at a higher frequency in the transmitting parents of children with WS than in the general population, suggesting that it predisposes to the WS deletion. Frohnauer et al. recently reported that the frequency of this...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-4-7

    authors: Morris CA,Mervis CB,Osborne LR

    更新日期:2011-02-28 00:00:00

  • Short stature and primary ovarian insufficiency possibly due to chromosomal position effect in a balanced X;1 translocation.

    abstract:BACKGROUND:Primary ovarian insufficiency (POI) is defined as a primary ovarian defect characterized by absent menarche (primary amenorrhea), a decrease in the initial primordial follicle number, high follicle-stimulating hormone (FSH) levels and hypoestrogenism. Although the etiology of a majority of POI cases is not y...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-015-0154-3

    authors: Genesio R,Mormile A,Licenziati MR,De Brasi D,Leone G,Balzano S,Izzo A,Bonfiglio F,Conti A,Fioretti G,Lenta S,Poggiano MR,Siani P,Nitsch L

    更新日期:2015-07-15 00:00:00

  • Prenatal diagnosis of two de novo 4q35-qter deletions characterized by array-CGH.

    abstract:BACKGROUND:The 4q- syndrome is a well known genetic condition caused by a partial terminal or interstitial deletion in the long arm of chromosome 4. The great variability in the extent of these deletions and the possible contribution of additional genetic rearrangements, such as unbalanced translocations, lead to a wid...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-6-47

    authors: Manolakos E,Kefalas K,Vetro A,Oikonomidou E,Daskalakis G,Psara N,Siomou E,Papageorgiou E,Sevastopoulou E,Konstantinidou A,Vrachnis N,Thomaidis L,Zuffardi O,Papoulidis I

    更新日期:2013-10-31 00:00:00

  • Identification of small segmental translocations in patients with repeated implantation failure and recurrent miscarriage using next generation sequencing after in vitro fertilization/intracytoplasmic sperm injection.

    abstract:BACKGROUND:To develop a novel preimplantation genetic screening (PGS) test using next generation sequencing(NGS) as a alternative to current array comparative genomic hybridization (array CGH) method for detection of small segmental translocations in two patients with repeated implantation failure (RIF) and recurrent m...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-015-0207-7

    authors: Ou J,Wang W,Feng T,Liao L,Meng Q,Zou Q,Ding J,Zheng A,Duan C,Li P,Liu Q,Lin C,Li H

    更新日期:2015-12-30 00:00:00

  • GSTM1 copy number variation in the context of single nucleotide polymorphisms in the human GSTM cluster.

    abstract:BACKGROUND:GSTM1 gene deletion is one of the most known copy number polymorphisms in human genome. It is most likely caused by homologous recombination between the repeats flanking the gene. However, taking into account that the deletion has no crucial effects on human well-being, and the ability of other GSTMs to comp...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-016-0241-0

    authors: Khrunin AV,Filippova IN,Aliev AM,Tupitsina TV,Slominsky PA,Limborska SA

    更新日期:2016-04-19 00:00:00

  • 7p15 deletion as the cause of hand-foot-genital syndrome: a case report, literature review and proposal of a minimum region for this phenotype.

    abstract:Background:Hand-foot-genital syndrome (HFGS) is a rare condition characterized by congenital malformations in the limbs and genitourinary tract. Generally, this syndrome occurs due to point mutations that cause loss of function of the HOXA13 gene, which is located on 7p15; however, there are some patients with HFGS cau...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-017-0345-1

    authors: Yokoyama E,Smith-Pellegrin DL,Sánchez S,Molina B,Rodríguez A,Juárez R,Lieberman E,Avila S,Castrillo JL,Del Castillo V,Frías S

    更新日期:2017-11-15 00:00:00

  • Jumping translocations of chromosome 1q occurring by a multi-stage process in an acute myeloid leukemia progressed from myelodysplastic syndrome with a TET2 mutation.

    abstract:Background:Jumping translocations (JTs) are rare chromosome rearrangements characterized by re-localization of one donor chromosome to multiple recipient chromosomes. Here, we describe an acute myeloid leukemia (AML) that progressed from myelodysplastic syndrome (MDS) in association with acquisition of 1q JTs. The sequ...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-019-0460-2

    authors: Lee I,Gudipati MA,Waters E,Duong VH,Baer MR,Zou Y

    更新日期:2019-11-19 00:00:00

  • Phylogenetic insight into subgenera Idaeobatus and Malachobatus (Rubus, Rosaceae) inferring from ISH analysis.

    abstract:BACKGROUND:Rubus is a large and taxonomically complex genus exhibiting agamospermy, polyploidy and frequent hybridization. The objective of this work was to elucidate rDNA disrtibution pattern and investigate genomic composition of polyploids in 16 Rubus taxa (2n = 2x, 3x, 4x, 8x) of two subgenera Idaeobatus and Malach...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-015-0114-y

    authors: Wang Y,Wang X,Chen Q,Zhang L,Tang H,Luo Y,Liu Z

    更新日期:2015-02-03 00:00:00

  • De novo mosaic and partial monosomy of chromosome 21 in a case with superior vena cava duplication.

    abstract:Background:Full or partial monosomy of chromosome (chr) 21 is a very rare abnormal cytogenetic finding. It is characterized by variable sizes and deletion breakpoints on the long arm (q) of chr 21 that lead to a broad spectrum of phenotypes that include an increased risk of birth defects, developmental delay and intell...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-020-00513-2

    authors: Azad AK,Yanakakis L,Issleb S,Turina J,Drabik K,Bonner C,Simi E,Wagner A,Fiddler M,Naeem R

    更新日期:2020-09-12 00:00:00

  • 13q deletion syndrome resulting from balanced chromosomal rearrangement in father: the significance of parental karyotyping.

    abstract:Background:Retinoblastoma is a malignancy of the eye in children characterized by biallelic inactivation of the retinoblastoma 1 gene (RB1), located at chromosome 13q14.2. Children with interstitial chromosome 13q deletions that include the RB1 gene show a predisposition to develop retinoblastoma and variable other fea...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-020-00500-7

    authors: Dittner-Moormann S,Reschke M,Biewald E,Kuechler A,Klein B,Timmermann B,Lohmann D,Ketteler P,Kanber D

    更新日期:2020-07-23 00:00:00

  • Cytogenetic analysis in the neotropical fish Astyanax goyacensis Eigenmann, 1908 (Characidae, incertae sedis): karyotype description and occurrence of B microchromosomes.

    abstract:BACKGROUND:B chromosomes, also known as supernumerary or accessory chromosomes, are additional chromosomes over the standard complement found in various groups of plants and animals. We investigated the presence of, and characterized, supernumerary microchromosomes in Astyanax goyacensis using classical and molecular c...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-6-48

    authors: Dos Santos LP,Castro JP,Francisco CM,Vicari MR,de Almeida MC,Goll LG,Morelli S,Artoni RF

    更新日期:2013-11-05 00:00:00

  • A modified method for preparing meiotic chromosomes based on digesting pollen mother cells in suspension.

    abstract:BACKGROUND:Meiotic chromosome preparation is a key step in plant meiotic research. Pollen mother cell (PMC) wall elimination is beneficial to cytogenetic experimental procedures. Without wall interference, these procedures are easier and more successful. In existing methods it is difficult to eliminate PMC walls comple...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-015-0184-x

    authors: Dang J,Zhao Q,Yang X,Chen Z,Xiang S,Liang G

    更新日期:2015-10-24 00:00:00

  • Prenatal diagnosis of rearrangements in the fetal 22q11.2 region.

    abstract:Background:22q11.2 deletion syndrome (22q11.2DS) and 22q11.2 duplication syndrome (22q11.2DupS) are the most common copy number variations in humans. The clinical phenotypes of these two syndromes are variable, and there are no large sample data on the prenatal detection rate for these two syndromes in the Chinese popu...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-020-00498-y

    authors: Li S,Jin Y,Yang J,Yang L,Tang P,Zhou C,Wu L,Dong J,Chen J,Shen H

    更新日期:2020-07-08 00:00:00

  • Meiotic and mitotic behaviour of a ring/deleted chromosome 22 in human embryos determined by preimplantation genetic diagnosis for a maternal carrier.

    abstract:BACKGROUND:Ring chromosomes are normally associated with developmental anomalies and are rarely inherited. An exception to this rule is provided by deletion/ring cases. We were provided with a unique opportunity to investigate the meiotic segregation at oogenesis in a woman who is a carrier of a deleted/ring 22 chromos...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-2-3

    authors: Mantzouratou A,Mania A,Apergi M,Laver S,Serhal P,Delhanty J

    更新日期:2009-01-23 00:00:00

  • FISH molecular testing in cytological preparations from solid tumors.

    abstract::Many of the exciting new developments in solid tumor molecular cytogenetics impact classical and molecular pathology. Fluorescence in situ hybridization to identify specific DNA target sequences in nuclei of non-dividing cells in solid neoplasms has contributed to the integration of molecular cytogenetics into cytolog...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-014-0056-9

    authors: Caria P,Vanni R

    更新日期:2014-08-22 00:00:00

  • Kleefstra syndrome in Hungarian patients: additional symptoms besides the classic phenotype.

    abstract:BACKGROUND:Kleefstra syndrome is a rare genetic disorder, with core phenotypic features encompassing developmental delay/intellectual disability, characteristic facial features - brachy(micro)cephaly, unusual shaped eyebrows, flat face with hypertelorism, short nose with anteverted nostrils, thickened lower lip, carpmo...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-016-0231-2

    authors: Hadzsiev K,Komlosi K,Czako M,Duga B,Szalai R,Szabo A,Postyeni E,Szabo T,Kosztolanyi G,Melegh B

    更新日期:2016-02-25 00:00:00

  • 3D-FISH analysis reveals chromatid cohesion defect during interphase in Roberts syndrome.

    abstract:BACKGROUND:Roberts syndrome (RBS) is a rare autosomal recessive disorder mainly characterized by growth retardation, limb defects and craniofacial anomalies. Characteristic cytogenetic findings are "railroad track" appearance of chromatids and premature centromere separation in metaphase spreads. Mutations in the ESCO2...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-014-0059-6

    authors: Dupont C,Bucourt M,Guimiot F,Kraoua L,Smiljkovski D,Le Tessier D,Lebugle C,Gerard B,Spaggiari E,Bourdoncle P,Tabet AC,Benzacken B,Dupont JM

    更新日期:2014-09-30 00:00:00

  • A familial chromosomal complex rearrangement confirms RUNX1T1 as a causative gene for intellectual disability and suggests that 1p22.1p21.3 duplication is likely benign.

    abstract:Background:Complex chromosomal rearrangements are constitutive structural aberrations involving three or more breaks. They can be balanced or unbalanced and result in different outcomes, depending on deletion/duplication of genomic material, gene disruption, or position effects. Case presentation:We report on a patien...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-019-0440-6

    authors: Restaldi F,Alesi V,Aquilani A,Genovese S,Russo S,Coletti V,Pompili D,Falasca R,Dallapiccola B,Capolino R,Luciani M,Novelli A

    更新日期:2019-06-14 00:00:00

  • A rare coincidence of different types of driver mutations among uterine leiomyomas (UL).

    abstract::Mutations of mediator subcomplex 12 (MED12) and of high mobility group protein AT-hook 2 (HMGA2) are driver mutations in uterine leiomyomas (UL) that have not been observed to coexist in one tumor and even rarely coexist in different UL tumors of one patient. Here we describe a patient who underwent hysterectomy becau...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-015-0177-9

    authors: Holzmann C,Markowski DN,Bartnitzke S,Koczan D,Helmke BM,Bullerdiek J

    更新日期:2015-10-14 00:00:00

  • Identifying novel genetic alterations in pediatric acute lymphoblastic leukemia based on copy number analysis.

    abstract::Copy number variations (CNVs) analysis may reveal molecular biomarkers and provide information on the pathogenesis of acute lymphoblastic leukemia (ALL). We investigated the gene copy number in childhood ALL by microarray and select three new recurrent CNVs to evaluate by real-time PCR assay: DMBT1, KIAA0125 and PRDM1...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/s13039-020-00491-5

    authors: Batista-Gomes JA,Mello FAR Jr,de Oliveira EHC,de Souza MPC,Wanderley AV,da Costa Pantoja L,Dos Santos NPC,Khayat BCM,Khayat AS

    更新日期:2020-06-26 00:00:00

  • Unexpected structural complexity of supernumerary marker chromosomes characterized by microarray comparative genomic hybridization.

    abstract:BACKGROUND:Supernumerary marker chromosomes (SMCs) are structurally abnormal extra chromosomes that cannot be unambiguously identified by conventional banding techniques. In the past, SMCs have been characterized using a variety of different molecular cytogenetic techniques. Although these techniques can sometimes iden...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-1-7

    authors: Tsuchiya KD,Opheim KE,Hannibal MC,Hing AV,Glass IA,Raff ML,Norwood T,Torchia BA

    更新日期:2008-04-21 00:00:00

  • Chromothripsis 18 in multiple myeloma patient with rapid extramedullary relapse.

    abstract:Background:Catastrophic chromosomal event known as chromothripsis was proven to be a significant hallmark of poor prognosis in several cancer diseases. While this phenomenon is very rare in among multiple myeloma (MM) patients, its presence in karyotype is associated with very poor prognosis. Case presentation:In our ...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/s13039-018-0357-5

    authors: Smetana J,Oppelt J,Štork M,Pour L,Kuglík P

    更新日期:2018-01-18 00:00:00

  • A new case of de novo 19p13.2p13.12 deletion in a girl with overgrowth and severe developmental delay.

    abstract:BACKGROUND:We report clinical and molecular cytogenetic characterization of a 2 year-old girl with 19p13.2p13.12 microdeletion and compare her clinical features with those of three other patients reported before. RESULT:Array comparative genomic hybridization (aCGH) revealed in the present patient a de novo microdelet...

    journal_title:Molecular cytogenetics

    pub_type:

    doi:10.1186/1755-8166-7-40

    authors: Natiq A,Elalaoui SC,Miesch S,Bonnet C,Jonveaux P,Amzazi S,Sefiani A

    更新日期:2014-06-05 00:00:00

  • Characterization of a prenatally assessed de novo supernumerary minute ring chromosome 20 in a phenotypically normal male.

    abstract:BACKGROUND:The heterogeneous group of small supernumerary marker chromosomes (sSMCs) presents serious counseling problems, especially if they are present de novo and diagnosed prenatally. The incidence has been estimated at 1 in 1000 prenatal samples. We present a case of mosaic sSMC diagnosed prenatally after amniocen...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-2-1

    authors: Kitsiou-Tzeli S,Manolakos E,Lagou M,Kontodiou M,Kosyakova N,Ewers E,Weise A,Garas A,Orru S,Liehr T,Metaxotou A

    更新日期:2009-01-07 00:00:00

  • Comparative analysis of copy number detection by whole-genome BAC and oligonucleotide array CGH.

    abstract:BACKGROUND:Microarray-based comparative genomic hybridization (aCGH) is a powerful diagnostic tool for the detection of DNA copy number gains and losses associated with chromosome abnormalities, many of which are below the resolution of conventional chromosome analysis. It has been presumed that whole-genome oligonucle...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-3-11

    authors: Neill NJ,Torchia BS,Bejjani BA,Shaffer LG,Ballif BC

    更新日期:2010-06-29 00:00:00

  • Position of chromosomes 18, 19, 21 and 22 in 3D-preserved interphase nuclei of human and gorilla and white hand gibbon.

    abstract:BACKGROUND:Even though comparative nuclear architecture studies in hominoids are sparse, nuclear chromosome architecture was shown to be conserved during hominoid evolution. Thus, it is suspected that yet unknown biological mechanisms must underlie this observation. RESULTS:Here for the first time a combination of mul...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-1-9

    authors: Manvelyan M,Hunstig F,Mrasek K,Bhatt S,Pellestor F,Weise A,Liehr T

    更新日期:2008-04-29 00:00:00

  • Meiotic segregation and interchromosomal effect in the sperm of a double translocation carrier: a case report.

    abstract:BACKGROUND:Infertility is a natural mechanism of selection intended to prevent the delivery of a child with malformations or mental retardation. Male infertility is closely related to chromosomal abnormalities. This study was focused on the analysis of meiotic segregation involving a Robertsonian translocation, 45,XY,d...

    journal_title:Molecular cytogenetics

    pub_type: 杂志文章

    doi:10.1186/1755-8166-2-24

    authors: Juchniuk de Vozzi MS,Santos SA,Pereira CS,Cuzzi JF,Laureano LA,Franco JG Jr,Martelli L

    更新日期:2009-12-01 00:00:00