Shewanella loihica sp. nov., isolated from iron-rich microbial mats in the Pacific Ocean.

abstract：:A Gram-stain-negative, motile, aerobic, rod-shaped bacterium with flagella, designated ZX-21T, was isolated from surface seawater of the East Sea in Zhoushan, China. Growth of strain ZX-21T was observed at 10--35  o°C (optimum, 30 °C), at pH 6.0-8.5 (pHoptimum 6.5-7.0) and in the presence of 0.5-8 % (w/v) NaCl (optimu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yu XD,Yu XY,Fu GY,Zhao Z,Shen X,Sun C,Wu M

更新日期：2019-05-01 00:00:00

abstract：:A Gram-negative, non-motile, filamentous, rod-shaped, non-spore-forming bacterium (strain F2(T)) was isolated from the surface of an electricity-harvesting electrode incubated in marine sediments. Strain F2(T) does not contain c-type cytochromes, flexirubin or carotenoids. It is a facultative anaerobe that can ferment...

journal_title：International journal of systematic and evolutionary microbiology

authors： Holmes DE,Nevin KP,Woodard TL,Peacock AD,Lovley DR

更新日期：2007-04-01 00:00:00

abstract：:An oval- to rod-shaped, motile, Gram-stain-negative, oxidase-positive, catalase-negative, pink-coloured phototrophic bacterium (designated as strain JA968T) was isolated from an estuary near Pata, Gujarat, India. Cells had an intracytoplasmic membrane architecture as lamellae and divided by budding. Strain JA968T had ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Buddhi S,G S,Gupta D,Ch S,Ch V R

更新日期：2020-01-01 00:00:00

abstract：:Two novel Gram-stain-negative, motile, catalase-negative and oxidase-positive strains of bacteria (JC131(T) and JC112) were isolated from Lonar, a soda lake in India. Based on 16S rRNA gene sequence similarity studies, strains JC131(T) and JC112 belong to the family Cohaesibacteraceae of the class Alphaproteobacteria ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sultanpuram VR,Lodha TD,Chintalapati VR,Chintalapati S

更新日期：2013-11-01 00:00:00

abstract：:Gram-positive, non-spore-forming rods, strain 5401308T, were isolated from a human ankle discharge. Based on cellular morphology and the results of biochemical testing, this strain was tentatively identified as an undescribed member of the genus Brevibacterium. The major fatty acids were anteiso-C15:0 (45.3%), anteiso...

journal_title：International journal of systematic and evolutionary microbiology

authors： Roux V,Raoult D

更新日期：2009-08-01 00:00:00

abstract：:Two strains, 8-4-E12(T) and 8-4-E13(T), were isolated from a biowaste composting reactor. Based on 16S rRNA gene sequences, both strains belong to the genus Bacillus. Strain 8-4-E12(T) was most closely related to the type strains of Bacillus shackletonii, B. acidicola, B. sporothermodurans and B. oleronius (96.4, 96.3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kosowski K,Schmidt M,Pukall R,Hause G,Kämpfer P,Lechner U

更新日期：2014-01-01 00:00:00

abstract：:A novel acidobacterial strain, Sakura1(T), was isolated from pieces of cherry bark. Cells of strain Sakura1(T) were non-motile, rod-shaped and stained Gram-negative. This strictly aerobic isolate was mesophilic but was able to grow at temperatures as low as 10 °C. Colonies were pink due to production of carotenoids, a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yamada K,Okuno Y,Meng XY,Tamaki H,Kamagata Y,Hanada S

更新日期：2014-08-01 00:00:00

abstract：:A Gram-negative, psychrotolerant, chemoheterotrophic, aerobic, cream-coloured bacterium, designated IMCC3113(T), was isolated from coastal seawater from the Antarctic. On the basis of 16S rRNA gene sequence similarity analyses, the strain was most closely related to the type strains of Hahella chejuensis (93.0 %) and ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee K,Lee HK,Cho JC

更新日期：2008-02-01 00:00:00

abstract：:Two strains representing a novel species of the genus Saturnispora were isolated from rotting wood samples collected in an Atlantic Rainforest site in Brazil. Analyses of the sequences of the D1/D2 domains of the rRNA gene showed that this novel species belongs to a subclade in the Saturnispora clade formed by Saturni...

journal_title：International journal of systematic and evolutionary microbiology

authors： Morais CG,Lara CA,Borelli BM,Cadete RM,Moreira JD,Lachance MA,Rosa CA

更新日期：2016-10-01 00:00:00

abstract：:Five brightly red-pigmented, motile, rod-shaped, extremely halophilic bacteria were isolated from saltern crystallizer ponds in Alicante (two strains) and Mallorca (three strains), Spain. They grew optimally at salt concentrations between 20 and 30% and did not grow below 15% salts. Thus, these isolates are among the ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Antón J,Oren A,Benlloch S,Rodríguez-Valera F,Amann R,Rosselló-Mora R

更新日期：2002-03-01 00:00:00

abstract：:A marine bacterial strain, designated MD2(T), was isolated from the damaged tissue of a hydrocoral, Millepora dichotoma, collected from the coral reef in the northern Red Sea, Gulf of Eilat, Israel. Strain MD2(T) was Gram-reaction-negative, rod-shaped and motile, and formed small, creamy and opaque colonies, 1-2 mm in...

journal_title：International journal of systematic and evolutionary microbiology

authors： Paramasivam N,Ben-Dov E,Arotsker L,Kushmaro A

更新日期：2013-05-01 00:00:00

abstract：:A novel anaerobic fermentative bacterium, strain SEBR 4209T, was isolated from a water sample of a Congolese oil field. Strain SEBR 4209T is phylogenetically related to the genus Pleomorphochaeta, in the family Spirochaetaceae. Its closest relatives are Pleomorphochaeta caudata SEBR 4223T (94.5 % 16S rRNA gene sequenc...

journal_title：International journal of systematic and evolutionary microbiology

authors： Arroua B,Grimaud R,Hirschler-Réa A,Bouriat P,Magot M,Urios L,Ranchou-Peyruse A

更新日期：2018-12-01 00:00:00

abstract：:Two Gram-stain-negative, rod-shaped bacterial strains (C5T and C16), isolated from root nodules of Phaseolus vulgaris L. in Jiangxi Province, PR China, were characterized by using a polyphasic taxonomical approach. The phylogenetic analysis of the 16S rRNA gene and three concatenated housekeeping genes (recA-glnII-atp...

journal_title：International journal of systematic and evolutionary microbiology

authors： Huo Y,Tong W,Wang J,Wang F,Bai W,Wang E,Shi P,Chen W,Wei G

更新日期：2019-07-01 00:00:00

abstract：:A Gram-stain-negative, facultative anaerobic and oligotrophic, rod-shaped, and motile with single polar flagellum bacterial strain, designed M11-4T was isolated from mangrove sediment in Yunxiao Mangrove National Nature Reserve, China. Growth was observed at temperatures from 10 to 40 °C (optimum 30 °C), at salinities...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liao H,Li Y,Guo X,Lin X,Lai Q,Xu H,Zheng T,Tian Y

更新日期：2017-12-01 00:00:00

abstract：:Two novel sulfate-reducing bacteria, strains ALDC(T) and Lake, which were able to oxidize n-alkanes, were isolated from a naval oily wastewater-storage facility (VA, USA) and from oilfield production water (OK, USA), respectively. The type strain (ALDC(T)) had a narrow substrate specificity and could grow only with n-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Davidova IA,Duncan KE,Choi OK,Suflita JM

更新日期：2006-12-01 00:00:00

abstract：:Two novel actinobacteria, designated strains Gsoil 097T and Gsoil 818T, isolated from soil of a ginseng field, South Korea, were characterized by a polyphasic approach to clarify their taxonomic positions. They were Gram-reaction-positive, aerobic, non-spore-forming and rod-shaped. Phylogenetic analysis based on 16S r...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee HY,Liu Q,Kang MS,Kim SK,Lee SY,Im WT

更新日期：2016-05-01 00:00:00

abstract：:'Holospora acuminata' infects micronuclei of Paramecium bursaria (Protozoa, Ciliophora), whereas 'Holospora curviuscula' infects the macronucleus in other clones of the same host species. Because these micro-organisms have not been cultivated, their description has been based only on some morphological properties and ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rautian MS,Wackerow-Kouzova ND

更新日期：2013-05-01 00:00:00

abstract：:A Gram-stain-positive, facultatively anaerobic, endospore-forming bacterium, designated strain TD8T, was isolated from surface-sterilized rice seeds (Oryza sativa L.). Phylogenetic analysis of the 16S rRNA gene indicated that strain TD8T should be placed within the genus Gracilibacillus (95.2-99.0 % sequence similarit...

journal_title：International journal of systematic and evolutionary microbiology

authors： He SW,Wang X,Guo HB,Han JG,Thin KK,Gao JS,Ma LA,Zhang XX

更新日期：2020-10-01 00:00:00

abstract：:Two xylan-degrading bacteria, strains MX15-2(T) and MX21-2(T), were isolated from soils collected in Nan province, Thailand. Cells were Gram-reaction-positive, facultatively anaerobic, spore-forming and rod-shaped. They contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The major menaquinone was MK-7. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Khianngam S,Tanasupawat S,Akaracharanya A,Kim KK,Lee KC,Lee JS

更新日期：2010-12-01 00:00:00

abstract：:An actinomycete strain, designated strain SH2-13(T), was isolated from a marine sediment sample collected from the Andaman Sea of Thailand. Applying a polyphasic approach, the isolate was identified as a member of the genus Micromonospora using morphological and chemotaxonomic characteristics, including the presence o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Supong K,Suriyachadkun C,Tanasupawat S,Suwanborirux K,Pittayakhajonwut P,Kudo T,Thawai C

更新日期：2013-02-01 00:00:00

abstract：:A thermophilic, anaerobic, chemo-organotrophic bacterium, designated MV1087T, was isolated from a deep-sea hydrothermal chimney sample collected from the Mid-Atlantic Ridge. The cells were straight, motile and stained gram-negative. Growth was observed from 45 to 65 degrees C, with an optimum around 65 degrees C. No g...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wery N,Moricet JM,Cueff V,Jean J,Pignet P,Lesongeur F,Cambon-Bonavita MA,Barbier G

更新日期：2001-09-01 00:00:00

abstract：:A Gram-positive, non-motile, non-spore-forming coccus (strain JS(T)) was isolated from kimchi (a traditional Korean food) and investigated using a polyphasic taxonomic approach. The 16S rRNA gene sequence similarity between strain JS(T) and its closest relative, Tetragenococcus halophilus IAM 1676(T), was 98.1%. The l...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee M,Kim MK,Vancanneyt M,Swings J,Kim SH,Kang MS,Lee ST

更新日期：2005-07-01 00:00:00

abstract：:Principle 2 of the Prokaryotic Code, as modified by the ICSP in 1999, reads: 'The nomenclature of prokaryotes is not independent of botanical and zoological nomenclature. When naming new taxa in the rank of genus or higher, due consideration is to be given to avoiding names which are regulated by the International Cod...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oren A

更新日期：2017-09-01 00:00:00

abstract：:Advances in DNA sequencing and the increasing number of sequences available in databases have greatly enhanced the bacterial identification process. Several species within the genus Mycobacterium cause serious human and animal diseases. In order to assess their relative positions in the evolutionary process, four gene...

journal_title：International journal of systematic and evolutionary microbiology

authors： Devulder G,de Montclos MP,Flandrois JP

更新日期：2005-01-01 00:00:00

abstract：:Phylogenetic analyses of 16S rRNA gene sequences by distance matrix and parsimony methods indicated that the currently known species of the genus Sphingomonas can be divided into four clusters. Some chemotaxonomic and phenotypic differences were noted among these clusters. Three new genera, Sphingobium, Novosphingobiu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Takeuchi M,Hamana K,Hiraishi A

更新日期：2001-07-01 00:00:00

abstract：:Previously, 22 aerobic Gram-negative bacteria were isolated from biofilms growing on granules of the synthetic polyester poly(epsilon-caprolactone); the granules were used as a fixed bed in a denitrification reactor. All the strains showed similar fatty acid profiles. The 16S rRNA gene sequences of five strains were p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mergaert J,Cnockaert MC,Swings J

更新日期：2003-11-01 00:00:00

abstract：:A lightly yellowish-pigmented, oxidase-negative bacterial strain (PB45.5T) isolated from the Nam Nao district of Phetchabun in central Thailand was investigated to determine its taxonomic position. Cells of the isolate showed a rod shaped appearance. The strain stained Gram-negative. Strain PB45.5T shared highest 16S ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Glaeser SP,Tobias NJ,Thanwisai A,Chantratita N,Bode HB,Kämpfer P

更新日期：2017-04-01 00:00:00

abstract：:A Gram-negative, orange-pigmented, aerobic, non-flagellated, rod-shaped bacterium, designated strain SM1214T, was isolated from Arctic intertidal sand collected from Kongsfjorden, Svalbard. The strain grew at 10-30 °C and with 0.5-5 % (w/v) NaCl. It hydrolysed casein and aesculin but did not reduce nitrate to nitrite....

journal_title：International journal of systematic and evolutionary microbiology

authors： Xu F,Zhang XY,Liu C,Shi M,Su HN,Qin QL,Chen XL,Zhang YZ,Song XY

更新日期：2016-01-01 00:00:00

abstract：:A novel methane-producing archaeon, designated strain HASU(T), was isolated from a lotus field. Cells were Gram-negative, non-motile, irregular cocci, 2-3 mum in diameter, and occurred singly. Growth was observed at 15-40 degrees C (optimum, 37 degrees C) and pH 6.5-7.5 (optimum, pH 7.0). The G+C content of the genomi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Imachi H,Sakai S,Nagai H,Yamaguchi T,Takai K

更新日期：2009-04-01 00:00:00

abstract：:Two halophilic archaea, strains EN-2(T) and SH-4, were isolated from the saline lakes Erliannor and Shangmatala, respectively, in Inner Mongolia, China. Cells were strictly aerobic, motile rods. Colonies were red. Strains EN-2(T) and SH-4 were able to grow at 25-50 °C (optimum 35-40 °C), with 2.5-5.0 M NaCl (optimum 3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gutiérrez MC,Castillo AM,Corral P,Kamekura M,Ventosa A

更新日期：2011-05-01 00:00:00