The fire ant social chromosome supergene variant Sb shows low diversity but high divergence from SB.

Abstract:

:Variation in social behaviour is common, yet little is known about the genetic architectures underpinning its evolution. A rare exception is in the fire ant Solenopsis invicta: Alternative variants of a supergene region determine whether a colony will have exactly one or up to dozens of queens. The two variants of this region are carried by a pair of 'social chromosomes', SB and Sb, which resemble a pair of sex chromosomes. Recombination is suppressed between the two chromosomes in the supergene region. While the X-like SB can recombine with itself in SB/SB queens, recombination is effectively absent in the Y-like Sb because Sb/Sb queens die before reproducing. Here, we analyse whole-genome sequences of eight haploid SB males and eight haploid Sb males. We find extensive SB-Sb differentiation throughout the >19-Mb-long supergene region. We find no evidence of 'evolutionary strata' with different levels of divergence comparable to those reported in several sex chromosomes. A high proportion of substitutions between the SB and Sb haplotypes are nonsynonymous, suggesting inefficacy of purifying selection in Sb sequences, similar to that for Y-linked sequences in XY systems. Finally, we show that the Sb haplotype of the supergene region has 635-fold less nucleotide diversity than the rest of the genome. We discuss how this reduction could be due to a recent selective sweep affecting Sb specifically or associated with a population bottleneck during the invasion of North America by the sampled population.

journal_name

Mol Ecol

journal_title

Molecular ecology

authors

Pracana R,Priyam A,Levantis I,Nichols RA,Wurm Y

doi

10.1111/mec.14054

subject

Has Abstract

pub_date

2017-06-01 00:00:00

pages

2864-2879

issue

11

eissn

0962-1083

issn

1365-294X

journal_volume

26

pub_type

杂志文章
  • Diagnostic SNPs reveal widespread introgressive hybridization between introduced bighead and silver carp in the Mississippi River Basin.

    abstract::Hybridization among conspecifics in native and introduced habitats has important implications for biological invasions in new ecosystems. Bighead (Hypophthalmichthys nobilis) and silver carp (H. molitrix) are genetically isolated and occur in sympatry within their native range. Following their introduction to North Am...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13285

    authors: Lamer JT,Ruebush BC,Arbieva ZH,McClelland MA,Epifanio JM,Sass GG

    更新日期:2015-08-01 00:00:00

  • Parent and offspring genotypes influence gene expression in early life.

    abstract::Parents can have profound effects on offspring fitness. Little, however, is known about the mechanisms through which parental genetic variation influences offspring physiology in natural systems. White-throated sparrows (Zonotrichia albicollis, WTSP) exist in two genetic morphs, tan and white, controlled by a large po...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.15205

    authors: Newhouse DJ,Barcelo-Serra M,Tuttle EM,Gonser RA,Balakrishnan CN

    更新日期:2019-09-01 00:00:00

  • Gynodioecy in structured populations: understanding fine-scale sex ratio variation in Beta vulgaris ssp. maritima.

    abstract::Natural selection, random processes and gene flow are known to generate sex ratio variations among sexually polymorphic plant populations. In gynodioecious species, in which hermaphrodites and females coexist, the relative effect of these processes on the maintenance of sex polymorphism is still up for debate. The aim...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2011.05414.x

    authors: De Cauwer I,Dufay M,Hornoy B,Courseaux A,Arnaud JF

    更新日期:2012-02-01 00:00:00

  • Shedding light on the evolution of plasticity in natural populations.

    abstract::Plasticity allows for changes in phenotype in response to environmental cues, often facilitating local adaptation to seasonal environments. Phenotypic plasticity alone, however, may not always be sufficient to ensure adaptation to new localities. In particular, changing cues associated with shifting seasonal regimes m...

    journal_title:Molecular ecology

    pub_type: 评论,杂志文章

    doi:10.1111/j.1365-294X.2011.05215.x

    authors: Hyma KE,Caicedo AL

    更新日期:2011-09-01 00:00:00

  • Genetic polyandry and sexual conflict in the sandbar shark, Carcharhinus plumbeus, in the western North Atlantic and Gulf of Mexico.

    abstract::To investigate patterns of polyandry in the sandbar shark (Carcharhinus plumbeus), 20 pregnant females were sampled from the western North Atlantic and Gulf of Mexico. Five species-specific microsatellite markers were used to genotype each shark and its litter. Of 20 litters, 17 (85%) were shown to have multiple sires...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2006.03138.x

    authors: Portnoy DS,Piercy AN,Musick JA,Burgess GH,Graves JE

    更新日期:2007-01-01 00:00:00

  • The emergence of the hyperinvasive vine, Mikania micrantha (Asteraceae), via admixture and founder events inferred from population transcriptomics.

    abstract::Biological invasions that involve well-documented rapid adaptations to new environments provide unequalled opportunities for testing evolutionary hypotheses. Mikania micrantha Kunth (Asteraceae), a perennial herbaceous vine native to tropical Central and South America, successfully invaded tropical Asia in the early 2...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14124

    authors: Yang M,He Z,Huang Y,Lu L,Yan Y,Hong L,Shen H,Liu Y,Guo Q,Jiang L,Zhang Y,Greenberg AJ,Zhou R,Ge X,Wu CI,Shi S

    更新日期:2017-07-01 00:00:00

  • How to estimate kinship.

    abstract::The concept of kinship permeates many domains of fundamental and applied biology ranging from social evolution to conservation science to quantitative and human genetics. Until recently, pedigrees were the gold standard to infer kinship, but the advent of next-generation sequencing and the availability of dense geneti...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14833

    authors: Goudet J,Kay T,Weir BS

    更新日期:2018-10-01 00:00:00

  • Weak link between dispersal and parasite community differentiation or immunogenetic divergence in two sympatric cichlid fishes.

    abstract::Geographical isolation, habitat variation and trophic specialization have contributed to a large extent to the astonishing diversity of cichlid fishes in the Great East African lakes. Because parasite communities often vary across space and environments, parasites can accompany and potentially enhance cichlid species ...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13833

    authors: Hablützel PI,Grégoir AF,Vanhove MP,Volckaert FA,Raeymaekers JA

    更新日期:2016-11-01 00:00:00

  • Extreme specificity in epiparasitic Monotropoideae (Ericaceae): widespread phylogenetic and geographical structure.

    abstract::The Monotropoideae (Ericaceae) are nonphotosynthetic plants that obtain fixed carbon from their fungal mycorrhizal associates. To infer the evolutionary history of this symbiosis we identified both the plant and fungal lineages involved using a molecular phylogenetic approach to screen 331 plants, representing 10 of t...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2001.01358.x

    authors: Bidartondo MI,Bruns TD

    更新日期:2001-09-01 00:00:00

  • Higher contribution of globally rare bacterial taxa reflects environmental transitions across the surface ocean.

    abstract::Microbial taxa range from being ubiquitous and abundant across space to extremely rare and endemic, depending on their ecophysiology and on different processes acting locally or regionally. However, little is known about how cosmopolitan or rare taxa combine to constitute communities and whether environmental variatio...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.15026

    authors: Ruiz-González C,Logares R,Sebastián M,Mestre M,Rodríguez-Martínez R,Galí M,Sala MM,Acinas SG,Duarte CM,Gasol JM

    更新日期:2019-04-01 00:00:00

  • SNP analyses reveal a diverse pool of potential colonists to earthquake-uplifted coastlines.

    abstract::In species that form dense populations, major disturbance events are expected to increase the chance of establishment for immigrant lineages. Real-time tests of the impact of disturbance on patterns of genetic structure are, however, scarce. Central to testing these concepts is determining the pool of potential immigr...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.15303

    authors: Peters JC,Waters JM,Dutoit L,Fraser CI

    更新日期:2020-01-01 00:00:00

  • Inbreeding and inbreeding avoidance in wild giant pandas.

    abstract::Inbreeding can have negative consequences on population and individual fitness, which could be counteracted by inbreeding avoidance mechanisms. However, the inbreeding risk and inbreeding avoidance mechanisms in endangered species are less studied. The giant panda, a solitary and threatened species, lives in many smal...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14284

    authors: Hu Y,Nie Y,Wei W,Ma T,Van Horn R,Zheng X,Swaisgood RR,Zhou Z,Zhou W,Yan L,Zhang Z,Wei F

    更新日期:2017-10-01 00:00:00

  • Ear mite infection is associated with altered microbial communities in genetically depauperate Santa Catalina Island foxes (Urocyon littoralis catalinae).

    abstract::The host-associated microbiome is increasingly recognized as a critical player in health and immunity. Recent studies have shown that disruption of commensal microbial communities can contribute to disease pathogenesis and severity. Santa Catalina Island foxes (Urocyon littoralis catalinae) present a compelling system...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.15325

    authors: DeCandia AL,Brenner LJ,King JL,vonHoldt BM

    更新日期:2020-04-01 00:00:00

  • Polymorphism of intron-1 in the voltage-gated sodium channel gene of Anopheles gambiae s.s. populations from Cameroon with emphasis on insecticide knockdown resistance mutations.

    abstract::Sequence variation at the intron-1 of the voltage-gated sodium channel gene in Anopheles gambiae M- and S-forms from Cameroon was assessed to explore the number of mutational events originating knockdown resistance (kdr) alleles. Mosquitoes were sampled between December 2005 and June 2006 from three geographical areas...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2009.04256.x

    authors: Etang J,Vicente JL,Nwane P,Chouaibou M,Morlais I,Do Rosario VE,Simard F,Awono-Ambene P,Toto JC,Pinto J

    更新日期:2009-07-01 00:00:00

  • Fire coral clones demonstrate phenotypic plasticity among reef habitats.

    abstract::Clonal populations are often characterized by reduced levels of genotypic diversity, which can translate into lower numbers of functional phenotypes, both of which impede adaptation. Study of partially clonal animals enables examination of the environmental settings under which clonal reproduction is favoured. Here, w...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14165

    authors: Dubé CE,Boissin E,Maynard JA,Planes S

    更新日期:2017-08-01 00:00:00

  • A 6.5-kb intergenic structural variation enhances P450-mediated resistance to pyrethroids in malaria vectors lowering bed net efficacy.

    abstract::Elucidating the complex evolutionary armory that mosquitoes deploy against insecticides is crucial to maintain the effectiveness of insecticide-based interventions. Here, we deciphered the role of a 6.5-kb structural variation (SV) in driving cytochrome P450-mediated pyrethroid resistance in the malaria vector, Anophe...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.15645

    authors: Mugenzi LMJ,Menze BD,Tchouakui M,Wondji MJ,Irving H,Tchoupo M,Hearn J,Weedall GD,Riveron JM,Cho-Ngwa F,Wondji CS

    更新日期:2020-11-01 00:00:00

  • Flickers of speciation: Sympatric colour morphs of the arc-eye hawkfish, Paracirrhites arcatus, reveal key elements of divergence with gene flow.

    abstract::One of the primary challenges of evolutionary research is to identify ecological factors that favour reproductive isolation. Therefore, studying partially isolated taxa has the potential to provide novel insight into the mechanisms of evolutionary divergence. Our study utilizes an adaptive colour polymorphism in the a...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14527

    authors: Whitney JL,Bowen BW,Karl SA

    更新日期:2018-03-01 00:00:00

  • Are the native giant tortoises from the Seychelles really extinct? A genetic perspective based on mtDNA and microsatellite data.

    abstract::The extinction of the giant tortoises of the Seychelles Archipelago has long been suspected but is not beyond doubt. A recent morphological study of the giant tortoises of the western Indian Ocean concluded that specimens of two native Seychelles species survive in captivity today alongside giant tortoises of Aldabra,...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2003.01834.x

    authors: Palkovacs EP,Marschner M,Ciofi C,Gerlach J,Caccone A

    更新日期:2003-06-01 00:00:00

  • Genomic characterization of sex-identification markers in Sebastes carnatus and Sebastes chrysomelas rockfishes.

    abstract::Fish have evolved a variety of sex-determining (SD) systems including male heterogamy (XY), female heterogamy (ZW) and environmental SD. Little is known about SD mechanisms of Sebastes rockfishes, a highly speciose genus of importance to evolutionary and conservation biology. Here, we characterize the sex determinatio...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13594

    authors: Fowler BL,Buonaccorsi VP

    更新日期:2016-05-01 00:00:00

  • A universal molecular method for identifying underground plant parts to species.

    abstract::As part of a large project to determine rooting depth and resource uptake on the Edwards Plateau of central Texas, we developed a DNA-based technique that allows the below-ground parts of all plants to be identified to the level of genus and usually to species. Identification is achieved by comparing DNA sequences of ...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2000.01034.x

    authors: Linder CR,Moore LA,Jackson RB

    更新日期:2000-10-01 00:00:00

  • Integrating QTL mapping and genome scans towards the characterization of candidate loci under parallel selection in the lake whitefish (Coregonus clupeaformis).

    abstract::As natural selection must act on underlying genetic variation, discovering the number and location of loci under the influence of selection is imperative towards understanding adaptive divergence in evolving populations. Studies employing genome scans have hypothesized that the action of divergent selection should red...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2004.02396.x

    authors: Rogers SM,Bernatchez L

    更新日期:2005-02-01 00:00:00

  • Local adaptation at higher trophic levels: contrasting hyperparasite-pathogen infection dynamics in the field and laboratory.

    abstract::Predicting and controlling infectious disease epidemics is a major challenge facing the management of agriculture, human and wildlife health. Co-evolutionarily derived patterns of local adaptation among pathogen populations have the potential to generate variation in disease epidemiology; however, studies of local ada...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13928

    authors: Parratt SR,Barrès B,Penczykowski RM,Laine AL

    更新日期:2017-04-01 00:00:00

  • Unearthing the impact of human disturbance on a notorious weed.

    abstract::Large-scale anthropogenic changes in the environment are reshaping global biodiversity and the evolutionary trajectory of many species. Evolutionary mechanisms that allow organisms to thrive in this rapidly changing environment are just beginning to be investigated (Hoffmann & Sgrò 2011; Colautti & Barrett 2013). Weed...

    journal_title:Molecular ecology

    pub_type: 评论,杂志文章

    doi:10.1111/mec.12717

    authors: Hodgins K

    更新日期:2014-05-01 00:00:00

  • Fire increases variance in genetic characteristics of Florida Sand Skink (Plestiodon reynoldsi) local populations.

    abstract::Fire is a complex event that maintains many ecological systems. The Florida Sand Skink (Plestiodon reynoldsi) is precinctive to Florida Scrub, a habitat that is maintained by infrequent fire. We characterize the effect of fire on genetic diversity and genetic differentiation at eight microsatellite loci in the Florida...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2010.04925.x

    authors: Schrey AW,Fox AM,Mushinsky HR,McCoy ED

    更新日期:2011-01-01 00:00:00

  • Loss of dendritic connectivity in southern California's urban riverscape facilitates decline of an endemic freshwater fish.

    abstract::Life history adaptations and spatial configuration of metapopulation networks allow certain species to persist in extreme fluctuating environments, yet long-term stability within these systems relies on the maintenance of linkage habitat. Degradation of such linkages in urban riverscapes can disrupt this dynamic in aq...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14445

    authors: Richmond JQ,Backlin AR,Galst-Cavalcante C,O'Brien JW,Fisher RN

    更新日期:2018-01-01 00:00:00

  • Patterns of variability and gene flow in Medicago citrina, an endangered endemic of islands in the western Mediterranean, as revealed by amplified fragment length polymorphism (AFLP).

    abstract::Medicago citrina is an endangered western Mediterranean endemic that grows only on small islets of the Balearic archipelago and off the eastern Spanish coast. Only 10 isolated subpopulations are currently known (four from Ibiza, three from Cabrera, two from Columbretes and one from an offshore islet in northern Alican...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2004.02289.x

    authors: Juan A,Crespo MB,Cowan RS,Lexer C,Fay MF

    更新日期:2004-09-01 00:00:00

  • Recommendations for utilizing and reporting population genetic analyses: the reproducibility of genetic clustering using the program STRUCTURE.

    abstract::Reproducibility is the benchmark for results and conclusions drawn from scientific studies, but systematic studies on the reproducibility of scientific results are surprisingly rare. Moreover, many modern statistical methods make use of 'random walk' model fitting procedures, and these are inherently stochastic in the...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2012.05754.x

    authors: Gilbert KJ,Andrew RL,Bock DG,Franklin MT,Kane NC,Moore JS,Moyers BT,Renaut S,Rennison DJ,Veen T,Vines TH

    更新日期:2012-10-01 00:00:00

  • Polyploidy and DNA methylation: new tools available.

    abstract::Most plant species are recent or ancient polyploids (displaying at least one round of genome duplication in their history). Cultivated species (e.g. wheat, cotton, canola, sugarcane, coffee) and invasive species are often relatively recent polyploids, and frequently of hybrid origin (i.e. allopolyploids). Despite the ...

    journal_title:Molecular ecology

    pub_type: 评论,杂志文章

    doi:10.1111/j.1365-294X.2009.04461.x

    authors: Salmon A,Ainouche ML

    更新日期:2010-01-01 00:00:00

  • Gene conversion and linkage: effects on genome evolution and speciation.

    abstract::Crossing over is well known to have profound effects on patterns of genetic diversity and genome evolution. Far less direct attention has been paid to another distinct outcome of meiotic recombination: noncrossover gene conversion (NCGC). Crossing over and NCGC both shuffle combinations of alleles, and this degradatio...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13736

    authors: Korunes KL,Noor MA

    更新日期:2017-01-01 00:00:00

  • Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping.

    abstract::Threespine stickleback populations are model systems for studying adaptive evolution and the underlying genetics. In lakes on the Haida Gwaii archipelago (off western Canada), stickleback have undergone a remarkable local radiation and show phenotypic diversity matching that seen throughout the species distribution. T...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12215

    authors: Deagle BE,Jones FC,Absher DM,Kingsley DM,Reimchen TE

    更新日期:2013-04-01 00:00:00