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Assessment of microbial plankton diversity as an ecological indicator in the NW Mediterranean coast.

Abstract：

:High-throughput sequencing of microbial assemblages has been proposed as an alternative methodology to the traditional ones used in marine monitoring and environmental assessment. Here, we evaluated pico- and nanoplankton diversity as ecological indicators in NW Mediterranean coastal waters by comparing their diversity in samples subjected to varying degrees of continental pressures. Using metabarcoding of the 16S and 18S rRNA genes, we explored whether alphadiversity indices, abundance of Operational Taxonomic Units and taxonomic groups (and their ratios) provide information on the ecological quality of coastal waters. Our results revealed that only eukaryotic diversity metrics and a limited number of prokaryotic and eukaryotic taxa displayed potential in assessing continental influences in our surveyed area, resulting thus in a restrained potential of microbial plankton diversity as an ecological indicator. Therefore, incorporating microbial plankton diversity in environmental assessment could not always result in a significant improvement of current marine monitoring strategies.

journal_name

Mar Pollut Bull

journal_title

Marine pollution bulletin

authors

Ferrera I,Reñé A,Funosas D,Camp J,Massana R,Gasol JM,Garcés E

doi

10.1016/j.marpolbul.2020.111691

subject

Has Abstract

pub_date

2020-11-01 00:00:00

pages

111691

eissn

0025-326X

issn

1879-3363

pii

S0025-326X(20)30809-2

journal_volume

160

pub_type

杂志文章

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