Revisiting the phylogeny of papilionoid legumes: New insights from comprehensively sampled early-branching lineages.

Abstract:

UNLABELLED: PREMISE OF STUDY:Phylogenetic relationships of the papilionoid legumes (Papilionoideae) reveal that the early branches are more highly diverse in floral morphology than are other clades of Papilionoideae. This study attempts for the first time to comprehensively sample the early-branching clades of this economically and ecologically important legume subfamily and thus to resolve relationships among them. • METHODS:Parsimony and Bayesian phylogenetic analyses of the plastid matK and trnL intron sequences included 29 genera not yet sampled in matK phylogenies of the Papilionoideae, 11 of which were sampled for DNA sequence data for the first time. • KEY RESULTS:The comprehensively sampled matK phylogeny better resolved the deep-branching relationships and increased support for many clades within Papilionoideae. The potentially earliest-branching papilionoid clade does not include any genus traditionally assigned to tribe Swartzieae. Dipterygeae is monophyletic with the inclusion of Monopteryx. The genera Aldina and Amphimas represent two of the nine main but as yet unresolved lineages comprising the large 50-kb inversion clade within papilionoids. The quinolizidine-alkaloid-accumulating genistoid clade is expanded to include a strongly supported subclade containing Ormosia and the previously unplaced Clathrotropis s.s., Panurea, and Spirotropis. Camoensia is the first-branching genus of the core genistoids. • CONCLUSIONS:The well-resolved phylogeny of the earliest-branching papilionoids generated in this study will greatly facilitate the efforts to redefine and stabilize the classification of this legume subfamily. Many key floral traits did not often predict phylogenetic relationships, so comparative studies on floral evolution and plant-animal interactions, for example, should also benefit from this study.

journal_name

Am J Bot

authors

Cardoso D,de Queiroz LP,Pennington RT,de Lima HC,Fonty E,Wojciechowski MF,Lavin M

doi

10.3732/ajb.1200380

subject

Has Abstract

pub_date

2012-12-01 00:00:00

pages

1991-2013

issue

12

eissn

0002-9122

issn

1537-2197

pii

ajb.1200380

journal_volume

99

pub_type

杂志文章
  • Isozyme variability of the wetland specialist Swertia perennis (Gentianaceae) in relation to habitat size, isolation, and plant fitness.

    abstract::We examined the effects of size and spatial isolation of fens on the isozyme variability of 17 populations of Swertia perennis. This long-lived perennial is a locally abundant fen specialist in Switzerland, where wetlands have been strongly fragmented. Isozyme variability was comparable to other outcrossing plants (A ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.5.801

    authors: Lienert J,Fischer M,Schneller J,Diemer M

    更新日期:2002-05-01 00:00:00

  • Pit membranes in tracheary elements of Rosaceae and related families: new records of tori and pseudotori.

    abstract::The micromorphology of pits in tracheary elements was examined in 35 species representing 29 genera of Rosaceae and related families to evaluate the assumption that angiosperm pits are largely invariant. In most Rosaceae, pit membranes between fibers and tracheids frequently appear to have amorphous thickenings with a...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.94.4.503

    authors: Jansen S,Sano Y,Choat B,Rabaey D,Lens F,Dute RR

    更新日期:2007-04-01 00:00:00

  • Phylogeny of Opuntia s.s. (Cactaceae): clade delineation, geographic origins, and reticulate evolution.

    abstract:PREMISE OF THE STUDY:The opuntias (nopales, prickly pears) are not only culturally, ecologically, economically, and medicinally important, but are renowned for their taxonomic difficulty due to interspecific hybridization, polyploidy, and morphological variability. Evolutionary relationships in these stem succulents ha...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100375

    authors: Majure LC,Puente R,Griffith MP,Judd WS,Soltis PS,Soltis DE

    更新日期:2012-05-01 00:00:00

  • Pollen from Arabidopsis thaliana and other Brassicaceae are functionally omniaperturate.

    abstract:PREMISE OF THE STUDY:Most pollen walls are interrupted by apertures, thin areas providing access to stigmatic fluids and exit points for pollen tubes. Unexpectedly, pollen tubes of Arabidopsis thaliana are not obligated to pass through apertures and can instead take the shortest route into the stigma, passing directly ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1600031

    authors: Edlund AF,Zheng Q,Lowe N,Kuseryk S,Ainsworth KL,Lyles RH,Sibener SJ,Preuss D

    更新日期:2016-06-01 00:00:00

  • Optimized genotyping with microsatellite markers in the fungal banana pathogen Mycosphaerella fijiensis (Mycosphaerellaceae).

    abstract:UNLABELLED: PREMISE OF THE STUDY:Large-scale population genetics studies are required to investigate the dispersal processes underlying the emergence of Mycosphaerella fijiensis, a fungal pathogen of banana. To this end, we have developed an optimized genotyping procedure combining novel microsatellite markers and a m...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1000295

    authors: Robert S,Rieux A,Argout X,Carlier J,Zapater MF

    更新日期:2010-12-01 00:00:00

  • Heterozygote advantage in the American chestnut, Castanea dentata (Fagaceae).

    abstract::The American chestnut (Castanea dentata; Fagaceae) was a dominant canopy tree in the Appalachian Mountains of North America. Since the introduction of the chestnut blight fungus (Cryphonectria parasitica; Valsaceae) in America, the American chestnut has been reduced to a predominantly clonal, understory species. Our o...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.90.2.207

    authors: Stilwell KL,Wilbur HM,Werth CR,Taylor DR

    更新日期:2003-02-01 00:00:00

  • Madagasikaria (Malpighiaceae): a new genus from Madagascar with implications for floral evolution in Malpighiaceae.

    abstract::Madagasikaria andersonii is described here as a new genus and species of Malpighiaceae from Madagascar. The phylogenetic placement of Madagasikaria was estimated by using combined data from ndhF and trnL-F chloroplast sequences and phytochrome (PHYC) and ITS nuclear sequences. It forms a strongly supported clade with ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.4.699

    authors: Davis CC

    更新日期:2002-04-01 00:00:00

  • Cytotype distribution patterns, ecological differentiation, and genetic structure in a diploid-tetraploid contact zone of Cardamine amara.

    abstract:UNLABELLED:• PREMISE OF THE STUDY:Contact zones between diploids and their autopolyploid descendants represent a unique evolutionary venue for studying polyploid establishment, cytotype coexistence, and interactions. Here, we examine cytotype coexistence in a diploid-tetraploid contact zone of a perennial herb, Cardam...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1500052

    authors: Zozomová-Lihová J,Malánová-Krásná I,Vít P,Urfus T,Senko D,Svitok M,Kempa M,Marhold K

    更新日期:2015-08-01 00:00:00

  • Land-use change has no detectable effect on reproduction of a disturbance-adapted, hawkmoth-pollinated plant species.

    abstract:PREMISE OF THE STUDY:Land-use change is cited as a primary driver of global biodiversity loss, with myriad consequences for species, populations, and ecosystems. However, few studies have examined its impact on species interactions, particularly pollination. Furthermore, when the effects of land-use change on pollinati...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1600302

    authors: Skogen KA,Jogesh T,Hilpman ET,Todd SL,Rhodes MK,Still SM,Fant JB

    更新日期:2016-11-01 00:00:00

  • Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences.

    abstract::Phylogenetic relationships among embryophytes (tracheophytes, mosses, liverworts, and hornworts) were examined using 21 newly generated mitochondrial small-subunit (19S) rDNA sequences. The "core" 19S rDNA contained more phylogenetically informative sites and lower homoplasy than either nuclear 18S or plastid 16S rDNA...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Duff RJ,Nickrent DL

    更新日期:1999-03-01 00:00:00

  • Indirect effects of herbivory on plant-pollinator interactions in invasive Lythrum salicaria.

    abstract:PREMISE OF THE STUDY:Herbivory can affect a plant's fitness in a variety of ways, including modifying the biotic interactions of the plant. In particular, when herbivory influences floral display, we hypothesize that pollinator visitation will be altered accordingly. Here we studied the indirect effects of feeding by t...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1500043

    authors: Russell-Mercier JL,Sargent RD

    更新日期:2015-05-01 00:00:00

  • Relation of ramet size to acorn production in five oak species of xeric upland habitats in south-central Florida.

    abstract::This study examined variation in two components of acorn production. Percentage of bearing ramets (stems) and number of acorns per bearing ramet were examined in five clonal oaks in three xeric habitats of south-central peninsular Florida in relation to ramet size within and between species and vegetative associations...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.1.124

    authors: Abrahamson WG,Layne JN

    更新日期:2002-01-01 00:00:00

  • Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America.

    abstract:PREMISE OF THE STUDY:Microsatellite primers were developed in the native legume tree Anadenanthera colubrina var. cebil to study the genetic diversity and genetic structure in natural populations in Argentina. METHODS AND RESULTS:Nine microsatellite markers were identified using a genomic library enriched for tandemly...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1200078

    authors: Barrandeguy ME,Prinz K,García MV,Finkeldey R

    更新日期:2012-09-01 00:00:00

  • Maintenance of sexually dimorphic preadult traits in Marchantia inflexa (Marchantiacae).

    abstract::Marchantia inflexa, a dioecious thallose liverwort, is sexually dimorphic in clonal expansion traits. We used selection analyses to measure the magnitude and direction of selection on clonal fitness to uncover possible mechanisms for the maintenance of preadult sexually dimorphic characters. We planted replicates of g...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.4.592

    authors: Fuselier L,McLetchie N

    更新日期:2002-04-01 00:00:00

  • Development of microsatellite markers for Miscanthus sinensis (Poaceae) and cross-amplification in other related species.

    abstract:PREMISE OF THE STUDY:We developed microsatellite loci for the biomass crop Miscanthus sinensis to investigate genetic diversity and population structure of M. sinensis and its closely related species. METHODS AND RESULTS:Fourteen microsatellite loci were identified from an enriched genomic library of M. sinensis and t...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100040

    authors: Zhou HF,Li SS,Ge S

    更新日期:2011-07-01 00:00:00

  • Analysis of substage associations in prophase I of meiosis in floral buds of wild-type Arabidopsis thaliana (Brassicaceae).

    abstract::We developed an improved cytological protocol for producing high quality, light microscope images of plant meiotic chromosomes. Because the technique works on species with small genomes and thick microsporocyte cell walls, it should be useful for studying the wild relatives of Arabidopsis and other eudicots with small...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.94.12.2063

    authors: Stronghill PE,Hasenkampf CA

    更新日期:2007-12-01 00:00:00

  • Northern hemisphere biogeography of Cerastium (Caryophyllaceae): insights from phylogenetic analysis of noncoding plastidnucleotide sequences.

    abstract::Phylogenetic relationships and biogeography of the genus Cerastium were studied using sequences of three noncoding plastid DNA regions (trnL intron, trnL-trnF spacer, and psbA-trnH spacer). A total of 57 Cerastium taxa was analyzed using two species of the putative sister genus Stellaria as outgroups. Maximum parsimon...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.91.6.943

    authors: Scheen AC,Brochmann C,Brysting AK,Elven R,Morris A,Soltis DE,Soltis PS,Albert VA

    更新日期:2004-06-01 00:00:00

  • Effects of inbreeding on male function and self-fertility in the partially self-incompatible herb Campanula rapunculoides (Campanulaceae).

    abstract::We examined the effect of inbreeding on fitness (through both male and female functions) and changes in self-fertility in the partially self-incompatible species Campanula rapunculoides. Individuals in natural populations of C. rapunculoides varied extensively in their strength of self-incompatibility (SI). We crossed...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.90.12.1736

    authors: Good-Avila SV,Nagel T,Vogler DW,Stephenson AG

    更新日期:2003-12-01 00:00:00

  • Anatomy and development of fruits of Lauraceae from the Middle Eocene Princeton Chert.

    abstract::Investigations of the Middle Eocene Princeton Chert reveal evidence for the connection of lauraceous flowers to fruits through a developmental series. Youngest fruits are found with attached floral remnants. Later stages show receptacle enlargement, fruit wall thickening, and the development of abundant sclereid clust...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.0800318

    authors: Little SA,Stockey RA,Penner B

    更新日期:2009-03-01 00:00:00

  • Temporal variation in floral display size and individual floral sex allocation in racemes of Narthecium asiaticum (Liliaceae).

    abstract::We analyzed the effects of temporal variation in floral display size (number of flowers open at one time on a plant) on the rate of pollen removed and receipt of individual flowers for the sequential blooming plant Narthecium asiaticum (Liliaceae). Because of the acropetal blooming of this species, the display sizes w...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.3.441

    authors: Ishii HS,Sakai S

    更新日期:2002-03-01 00:00:00

  • Phylogenetic signal and climatic niche of stem photosynthesis in the mediterranean and desert regions of California and Baja California Peninsula.

    abstract:PREMISE:Woody plants with photosynthetic stems are common in the drylands of the world; however, we know little about the origin(s) and geographical distribution of photosynthetic stems. Therefore, we set to answer the following questions: (1) Is stem photosynthesis phylogenetically conserved? (2) Do green-stemmed and ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.1002/ajb2.1572

    authors: Ávila-Lovera E,Garcillán PP

    更新日期:2020-12-06 00:00:00

  • The cost of carnivory for Darlingtonia californica (Sarraceniaceae): evidence from relationships among leaf traits.

    abstract::Scaling relationships among photosynthetic rate, foliar nutrient concentration, and leaf mass per unit area (LMA) have been observed for a broad range of plants. Leaf traits of the carnivorous pitcher plant Darlingtonia californica, endemic to southern Oregon and northern California, USA, differ substantially from the...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.92.7.1085

    authors: Ellison AM,Farnsworth EJ

    更新日期:2005-07-01 00:00:00

  • Structural correlates of imbibitional injury in Typha pollen.

    abstract::The ultrastructure of Typha latifolia pollen was examined as a function of pollen moisture content and incubation temperature, in order to identify possible lesions induced by imbibitional chilling. A syndrome of structural traits was found which characterizes damaged grains. Compared to viable grains, the protoplas...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Sack FD,Leopold AC,Hoekstra FA

    更新日期:1988-01-01 00:00:00

  • Complex origins of breadfruit (Artocarpus altilis, Moraceae): implications for human migrations in Oceania.

    abstract::Breadfruit (Artocarpus altilis, Moraceae), a traditional starch crop in Oceania, has enjoyed legendary status ever since its role in the infamous mutiny aboard the H.M.S. Bounty in 1789, yet its origins remain unclear. Breadfruit's closest relatives are A. camansi and A. mariannensis. DNA fingerprinting data (AFLP, am...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.91.5.760

    authors: Zerega NJ,Ragone D,Motley TJ

    更新日期:2004-05-01 00:00:00

  • Development of microsatellite loci for the endangered species Pityopsis ruthii (Asteraceae).

    abstract:PREMISE OF THE STUDY:Microsatellite loci were developed for the endangered species Pityopsis ruthii and will permit genetic and conservation studies of the species. METHODS AND RESULTS:A microsatellite-enriched library was used to develop 12 polymorphic microsatellite loci for P. ruthii. The loci amplified perfect and...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100100

    authors: Wadl PA,Dattilo AJ,Scheffler BE,Trigiano RN

    更新日期:2011-12-01 00:00:00

  • Patterns of multiple paternity in fruits of Mimulus ringens (Phrymaceae).

    abstract::Multiply sired fruits provide unambiguous evidence that pollen from two or more donors was deposited on a stigma and successfully fertilized ovules. Such multiple paternity within fruits can have important consequences for both parental and offspring fitness, but little is known about the frequency of multiple paterni...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.92.5.885

    authors: Mitchell RJ,Karron JD,Holmquist KG,Bell JM

    更新日期:2005-05-01 00:00:00

  • Seasonal and environmental changes of mycorrhizal associations and heterotrophy levels in mixotrophic Pyrola japonica (Ericaceae) growing under different light environments.

    abstract:PREMISE OF THE STUDY:Mixotrophy is a strategy whereby plants acquire carbon both through photosynthesis and heterotrophic exploitation of mycorrhizal fungi. In Euro-American Pyroleae species studied hitherto, heterotrophy levels vary according to species, sites of study, and possibly light conditions. We investigated m...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100546

    authors: Matsuda Y,Shimizu S,Mori M,Ito S,Selosse MA

    更新日期:2012-07-01 00:00:00

  • Dramatic vestigialization of floral fragrance across a transition from outcrossing to selfing in Abronia umbellata (Nyctaginaceae).

    abstract:PREMISE OF THE STUDY:Vestigialization of traits that no longer enhance fitness is a common theme in evolution. Plants often use colorful, scented flowers to attract pollinators that mediate outcross pollination. After an evolutionary shift from outcrossing to self-fertilization, where cross-pollination is no longer nec...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1300159

    authors: Doubleday LA,Raguso RA,Eckert CG

    更新日期:2013-11-01 00:00:00

  • Phylogeny of Rutaceae based on twononcoding regions from cpDNA.

    abstract::Primarily known only by the edible fruits of Citrus, Rutaceae comprise a large (c. 160 genera and 1900 species), morphologically diverse, cosmopolitan family. Of its extraordinary array of secondary chemical compounds, many have medicinal, antimicrobial, insecticidal, or herbicidal properties. To assist with the much-...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.2007313

    authors: Groppo M,Pirani JR,Salatino ML,Blanco SR,Kallunki JA

    更新日期:2008-08-01 00:00:00

  • Paraphyly changes understanding of timing and tempo of diversification in subtribe Hakeinae (Proteaceae), a giant Australian plant radiation.

    abstract:PREMISE OF THE STUDY:Subtribe Hakeinae (526 spp.) represents a large Australian plant radiation central to our understanding of that flora's evolution and ecology. It contains Grevillea-the third largest plant genus in Australia and a group inferred to have among the highest diversification rates in the angiosperms. Ho...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1500195

    authors: Mast AR,Olde PM,Makinson RO,Jones E,Kubes A,Miller ET,Weston PH

    更新日期:2015-10-01 00:00:00