Sulfitobacter sabulilitoris sp. nov., isolated from marine sand.

Abstract:

:A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, HSMS-29T, was isolated from a marine sand sample collected from the Yellow Sea, Republic of Korea. The neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that strain HSMS-29T fell within the clade comprising the type strains of Sulfitobacter species. Strain HSMS-29T exhibited 16S rRNA gene sequence similarities of 97.2-98.4 % to the type strains of Sulfitobacter mediterraneus, Sulfitobacter porphyrae, Sulfitobacter marinus, Sulfitobacter pontiacus, Sulfitobacter litoralis, Sulfitobacter brevis, Sulfitobacter noctilucicola and Sulfitobacter dubius and 96.3-96.9 % to the type strains of the other Sulfitobacter species. The genomic ANI values of strain HSMS-29T with the type strains of S. mediterraneus, S. marinus, S. pontiacus, S. litoralis, S. brevis, S. noctilucicola and S. dubius were 72.66-74.99 %. The DNA-DNA relatedness value between strain HSMS-29T and the type strain of S. porphyrae was 17 %. Strain HSMS-29T contained Q-10 as the predominant ubiquinone and C18 : 1ω7c as the major fatty acid. The major polar lipids of strain HSMS-29T were phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, one unidentified aminolipid and one unidentified lipid. The DNA G+C content of strain HSMS-29T was 65.0 mol% (HPLC) or 64.4 % (genome analysis). Distinguished phenotypic properties, along with the phylogenetic and genetic distinctiveness, revealed that strain HSMS-29T is separated from recognized Sulfitobacter species. On the basis of the data presented here, strain HSMS-29T is considered to represent a novel species of the genus Sulfitobacter, for which the name Sulfitobactersabulilitoris sp. nov. is proposed. The type strain is HSMS-29T (=KACC 19870T=NBRC 113549T).

authors

Park S,Kim IK,Lee JS,Yoon JH

doi

10.1099/ijsem.0.003614

subject

Has Abstract

pub_date

2019-10-01 00:00:00

pages

3230-3236

issue

10

eissn

1466-5026

issn

1466-5034

journal_volume

69

pub_type

杂志文章
  • Bacillus panacisoli sp. nov., isolated from ginseng soil.

    abstract::A Gram-staining-positive, motile, facultatively anaerobic, endospore-forming and rod-shaped bacterium, designated strain CJ32(T), was isolated from ginseng soil at Geumsan in Korea. The isolate grew optimally at 30 °C, 2% (w/v) NaCl and pH 7.0. Colonies of strain CJ32(T) were beige and circular with an entire margin o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.054320-0

    authors: Choi JH,Cha CJ

    更新日期:2014-03-01 00:00:00

  • Chryseobacterium ginsengisoli sp. nov., isolated from the rhizosphere of ginseng and emended description of Chryseobacterium gleum.

    abstract::Strain DCY 63(T), isolated from the rhizosphere of ginseng, was a Gram-reaction-negative, strictly aerobic, non-motile, catalase- and oxidase-positive rod. 16S rRNA gene sequence analysis revealed that strain DCY 63(T) belonged to the genus Chryseobacterium and was closely related to Chryseobacterium indoltheticum LMG...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.045427-0

    authors: Nguyen NL,Kim YJ,Hoang VA,Yang DC

    更新日期:2013-08-01 00:00:00

  • Taxonomic revision of water-bloom-forming species of oscillatorioid cyanobacteria.

    abstract::A polyphasic approach was used to clarify the taxonomy of the water-bloom-forming oscillatorioid cyanobacteria. Seventy-five strains of oscillatorioid cyanobacteria were characterized by 16S rDNA sequence analysis, DNA base composition, DNA-DNA hybridization, fatty acid composition, phycobilin pigment composition, com...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-5-1577

    authors: Suda S,Watanabe MM,Otsuka S,Mahakahant A,Yongmanitchai W,Nopartnaraporn N,Liu Y,Day JG

    更新日期:2002-09-01 00:00:00

  • Streptomyces graminilatus sp. nov., isolated from bamboo litter.

    abstract::A Gram-stain-positive, novel actinobacterium, designated strain JL-6(T), was isolated from the litter of a bamboo (Sasa borealis) forest in Damyang, Korea. Strain JL-6(T) had white-grey, smooth, cylindrical spores that were borne in straight, long spore-chains. The novel strain grew aerobically at 15-28 °C (optimum, 2...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.049528-0

    authors: Lee HJ,Whang KS

    更新日期:2014-02-01 00:00:00

  • Bradyrhizobium mercantei sp. nov., a nitrogen-fixing symbiont isolated from nodules of Deguelia costata (syn. Lonchocarpus costatus).

    abstract::Some bacteria collectively known as rhizobia can establish symbiotic relationships and the N2-fixation process with several legumes used as green manure, in pastures and for wood production. Symbionts belonging to the genus Bradyrhizobium are predominant in the tropics, and an increasing number of studies report high ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001870

    authors: Helene LCF,Delamuta JRM,Ribeiro RA,Hungria M

    更新日期:2017-06-01 00:00:00

  • Microbulbifer halophilus sp. nov., a moderately halophilic bacterium from north-west China.

    abstract::A Gram-negative, rod-shaped, moderately halophilic bacterium, designated strain YIM 91118(T), motile with a single polar flagellum, was isolated from Xinjiang province in north-west China and subjected to a polyphasic taxonomic study. Strain YIM 91118(T) grew optimally at 37 degrees C, pH 7.0-8.0 and 10% NaCl (w/v). I...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65519-0

    authors: Tang SK,Wang Y,Cai M,Lou K,Mao PH,Jin X,Jiang CL,Xu LH,Li WJ

    更新日期:2008-09-01 00:00:00

  • Methylobacterium iners sp. nov. and Methylobacterium aerolatum sp. nov., isolated from air samples in Korea.

    abstract::Two bacterial strains isolated from air samples, 5317S-33(T) and 5413S-11(T), were characterized by determining their phenotypic characteristics, cellular fatty acid profiles and phylogenetic positions based on 16S rRNA gene sequence analysis. 16S rRNA gene sequence analysis showed that these isolates belonged to the ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65047-0

    authors: Weon HY,Kim BY,Joa JH,Son JA,Song MH,Kwon SW,Go SJ,Yoon SH

    更新日期:2008-01-01 00:00:00

  • Advantages of multilocus sequence analysis for taxonomic studies: a case study using 10 housekeeping genes in the genus Ensifer (including former Sinorhizobium).

    abstract::There is a need for easy, practical, reliable and robust techniques for the identification and classification of bacterial isolates to the species level as alternatives to 16S rRNA gene sequence analysis and DNA-DNA hybridization. Here, we demonstrate that multilocus sequence analysis (MLSA) of housekeeping genes is a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65392-0

    authors: Martens M,Dawyndt P,Coopman R,Gillis M,De Vos P,Willems A

    更新日期:2008-01-01 00:00:00

  • Caloranaerobacter azorensis gen. nov., sp. nov., an anaerobic thermophilic bacterium isolated from a deep-sea hydrothermal vent.

    abstract::A thermophilic, anaerobic, chemo-organotrophic bacterium, designated MV1087T, was isolated from a deep-sea hydrothermal chimney sample collected from the Mid-Atlantic Ridge. The cells were straight, motile and stained gram-negative. Growth was observed from 45 to 65 degrees C, with an optimum around 65 degrees C. No g...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-5-1789

    authors: Wery N,Moricet JM,Cueff V,Jean J,Pignet P,Lesongeur F,Cambon-Bonavita MA,Barbier G

    更新日期:2001-09-01 00:00:00

  • Sphingobacterium caeni sp. nov., isolated from activated sludge.

    abstract::The taxonomic status of a bacterium, strain DC-8(T), isolated from activated sludge, was determined using a polyphasic taxonomic approach. The cells of strain DC-8(T) were Gram-negative, non-motile, non-spore-forming and rod-shaped. The isolate grew at temperature range of 10-40 °C (optimum 30-35 °C), pH range of 5.0-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.046987-0

    authors: Sun LN,Zhang J,Chen Q,He J,Li SP

    更新日期:2013-06-01 00:00:00

  • Agromyces allii sp. nov., isolated from the rhizosphere of Allium victorialis var. platyphyllum.

    abstract::Two Gram-positive, non-motile, yellow-pigmented, slightly curved and rod-shaped bacterial strains, UMS-62(T) and UMS-101, were isolated from the rhizosphere of Allium victorialis var. platyphyllum, a variety of wild edible greens grown on Ulleung island, Korea. The taxonomic position of the strains was investigated by...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64733-0

    authors: Jung SY,Lee SY,Oh TK,Yoon JH

    更新日期:2007-03-01 00:00:00

  • Nocardioides ginsengagri sp. nov., isolated from the soil of a ginseng field.

    abstract::A Gram-reaction-positive, rod-shaped, non-motile, non-spore-forming bacterium (strain BX5-10(T)) was isolated from the soil of a ginseng field on Baekdu Mountain in Jilin district, China. The taxonomic position of this bacterium was determined in an investigation based on a polyphasic approach. On the basis of 16S rRN...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.031823-0

    authors: Lee SH,Liu QM,Lee ST,Kim SC,Im WT

    更新日期:2012-03-01 00:00:00

  • Enterococcus silesiacus sp. nov. and Enterococcus termitis sp. nov.

    abstract::Three enterococci constituted two aberrant branches after numerical analysis of (GTG)5-PCR fingerprints: analogous patterns were found for two water isolates, strains W213 and W442T, and a separate position was found for an isolate from the gut of a termite, strain LMG 8895T. 16S rRNA gene sequence analysis classified...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63937-0

    authors: Švec P,Vancanneyt M,Sedláček I,Naser SM,Snauwaert C,Lefebvre K,Hoste B,Swings J

    更新日期:2006-03-01 00:00:00

  • Five novel species of the genus Nocardiopsis isolated from hypersaline soils and emended description of Nocardiopsis salina Li et al. 2004.

    abstract::Five novel Nocardiopsis strains isolated from hypersaline soils in China were subjected to a polyphasic analysis to determine their taxonomic position. All of the novel isolates could grow on agar plates at NaCl concentrations of up to 18 % (w/v), with optimum growth at 5-8 %. The DNA G+C contents of the novel strains...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64033-0

    authors: Li WJ,Kroppenstedt RM,Wang D,Tang SK,Lee JC,Park DJ,Kim CJ,Xu LH,Jiang CL

    更新日期:2006-05-01 00:00:00

  • Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest.

    abstract::Four isolates (FSL S4-120(T), FSL S4-696, FSL S4-710, and FSL S4-965) of Gram-positive, motile, facultatively anaerobic, non-spore-forming bacilli that were phenotypically similar to species of the genus Listeria were isolated from soil, standing water and flowing water samples obtained from the natural environment in...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.014118-0

    authors: Graves LM,Helsel LO,Steigerwalt AG,Morey RE,Daneshvar MI,Roof SE,Orsi RH,Fortes ED,Milillo SR,den Bakker HC,Wiedmann M,Swaminathan B,Sauders BD

    更新日期:2010-06-01 00:00:00

  • Compostibacillus humi gen. nov., sp. nov., a member of the family Bacillaceae, isolated from sludge compost.

    abstract::Two novel Gram-staining-positive, rod-shaped, endospore-forming and moderately thermophilic bacteria, designated strains DX-3(T) and GIESS002, were isolated from sludge composts from Guangdong Province, China. Analysis of 16S rRNA gene sequences revealed that the isolates were closely related to each other with extrem...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.062869-0

    authors: Yu Z,Wen J,Yang G,Liu J,Zhou S

    更新日期:2015-02-01 00:00:00

  • Treponema parvum sp. nov., a small, glucoronic or galacturonic acid-dependent oral spirochaete from lesions of human periodontitis and acute necrotizing ulcerative gingivitis.

    abstract::Small oral spirochaetes with a strict dependence on either glucuronic acid (GluA) or galacturonic acid (GalA) were isolated from European patients with periodontitis and from Chinese patients with either gingivitis or acute necrotizing ulcerative gingivitis (ANUG). Thirteen such isolates were similar phenotypically to...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-3-955

    authors: Wyss C,Dewhirst FE,Gmür R,Thurnheer T,Xue Y,Schüpbach P,Guggenheim B,Paster BJ

    更新日期:2001-05-01 00:00:00

  • Providencia vermicola sp. nov., isolated from infective juveniles of the entomopathogenic nematode Steinernema thermophilum.

    abstract::In the course of isolating bacteria from infective juveniles of the entomopathogenic nematode Steinernema thermophilum Ganguly & Singh, 2000, three isolates were obtained (OP1T, OP29 and VS3). On the basis of 16S rRNA gene sequence analysis and riboprint patterns, these three strains were identical to each other but d...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63973-0

    authors: Somvanshi VS,Lang E,Sträubler B,Spröer C,Schumann P,Ganguly S,Saxena AK,Stackebrandt E

    更新日期:2006-03-01 00:00:00

  • Chryseobacterium hominis sp. nov., to accommodate clinical isolates biochemically similar to CDC groups II-h and II-c.

    abstract::A collection of eight clinical strains from Belgian hospitals and three clinical strains of the CCUG collection were characterized biochemically as being similar to CDC groups II-h and II-c; the latter differs from group II-h only by positivity for sucrose acidification. These 11 strains were found to cluster accordin...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65158-0

    authors: Vaneechoutte M,Kämpfer P,De Baere T,Avesani V,Janssens M,Wauters G

    更新日期:2007-11-01 00:00:00

  • Bradyrhizobium kavangense sp. nov., a symbiotic nitrogen-fixing bacterium from root nodules of traditional Namibian pulses.

    abstract::Eight strains of symbiotic bacteria from root nodules of local races of cowpea (Vigna unguiculata) and Bambara groundnut (Vigna subterranea) grown on subsistence farmers' fields in the Kavango region, Namibia, were previously characterized and identified as a novel group within the genus Bradyrhizobium. To clarify the...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000666

    authors: Lasse Grönemeyer J,Hurek T,Reinhold-Hurek B

    更新日期:2015-12-01 00:00:00

  • Kitasatospora sampliensis sp. nov., a novel actinobacterium isolated from soil of a sugar-cane field in India.

    abstract::Polyphasic characterization of an actinomycete strain VT-36(T) isolated from a sugar-cane field soil sample collected in Punjab State, India, revealed that the strain belongs to the genus Kitasatospora. The strain's chemotaxonomic characters and G+C content of DNA (76.5 mol%) were typical of members of the genus. Anal...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63836-0

    authors: Mayilraj S,Krishnamurthi S,Saha P,Saini HS

    更新日期:2006-03-01 00:00:00

  • Characterization of Peptacetobacter hominis gen. nov., sp. nov., isolated from human faeces, and proposal for the reclassification of Clostridium hiranonis within the genus Peptacetobacter.

    abstract::A novel, Gram-stain-positive, rod-shaped, non-motile, non-spore-forming, obligately anaerobic bacterium, designated strain ZHW00191T, was isolated from human faeces and characterized by using a polyphasic taxonomic approach. Growth occurred at 25-45 °C (optimum, 37-42 °C), at pH 5.5-10.0 (optimum, pH 6.5-7.0) and with...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003925

    authors: Chen XJ,Wang ZQ,Zhou ZY,Zeng NY,Huang QF,Wang ZW,Tang WL,Zhou HW

    更新日期:2020-05-01 00:00:00

  • Postechiella marina gen. nov., sp. nov., isolated from seawater.

    abstract::A Gram-staining-negative, strictly aerobic, non-motile, yellow-pigmented bacterium, designated strain M091(T), was isolated from seawater at Damupo beach in Pohang, Republic of Korea, and investigated using a polyphasic taxonomic approach. The novel strain grew optimally at 25 °C, pH 7.0-8.0, and in the presence of 3%...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.031302-0

    authors: Lee DH,Cho SJ,Kim SM,Lee SB

    更新日期:2012-07-01 00:00:00

  • Arcobacter lanthieri sp. nov., isolated from pig and dairy cattle manure.

    abstract::A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440T, AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmation tests, analyses ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000318

    authors: Whiteduck-Léveillée K,Whiteduck-Léveillée J,Cloutier M,Tambong JT,Xu R,Topp E,Arts MT,Chao J,Adam Z,André Lévesque C,Lapen DR,Villemur R,Talbot G,Khan IUH

    更新日期:2015-08-01 00:00:00

  • Snuella lapsa gen. nov., sp. nov., isolated from tidal flat sediment.

    abstract::A yellow-coloured, rod-shaped, Gram-reaction-negative, aerobic bacterial strain, designated JC2132(T), was isolated from a tidal flat sediment sample from Ganghwa Island, Korea. The isolate required sea salts for growth. Cells produced non-diffusible carotenoid pigments, but flexirubin-type pigments were absent. Glidi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.027458-0

    authors: Yi H,Chun J

    更新日期:2011-10-01 00:00:00

  • Aneurinibacillus soli sp. nov., isolated from mountain soil.

    abstract::A novel bacterial strain designated CB4(T) was isolated from soil from the Hallasan, Jeju, Korea. Strain CB4(T) was found to be strictly aerobic, Gram-stain-positive, rod-shaped, motile and formed creamy greyish colonies on nutrient agar. The major fatty acids were identified as iso-C(15:0) and iso-C(16:0), and the pr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.066779-0

    authors: Lee KC,Kim KK,Eom MK,Kim JS,Kim DS,Ko SH,Lee JS

    更新日期:2014-11-01 00:00:00

  • Reclassification of the genus Natronolimnobius: proposal of two new genera, Natronolimnohabitans gen. nov. to accommodate Natronolimnobius innermongolicus and Natrarchaeobaculum gen. nov. to accommodate Natronolimnobius aegyptiacus and Natronolimnobius su

    abstract::The genus Natronolimnobius, currently including four species, is a member of the order Natrialbales, class Halobacteria, and consists of obligately alkaliphilic and extremely halophilic members found exclusively in highly alkaline hypersaline soda lakes. The species were classified into this genus mostly based on phyl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004186

    authors: Sorokin DY,Merkel AY,Messina E,Yakimov MM,Itoh T,Mesbah NM,Wiegel J,Oren A

    更新日期:2020-05-01 00:00:00

  • Rhodanobacter rhizosphaerae sp. nov., isolated from soil of ginseng rhizosphere.

    abstract::A Gram-stain-negative, aerobic, non-motile, non-spore-forming, yellow and rod-shaped bacterium, designated strain CR164T, was isolated from the rhizosphere soil of a ginseng field at Geumsan in Korea. CR164T grew at between 15 and 37 °C (optimal growth at 28 °C), between pH 6.0 and 9.0 (optimal growth at pH 7.0) and a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001825

    authors: Cho GY,Lee JC,Whang KS

    更新日期:2017-05-01 00:00:00

  • Aminivibrio pyruvatiphilus gen. nov., sp. nov., an anaerobic, amino-acid-degrading bacterium from soil of a Japanese rice field.

    abstract::A novel anaerobic bacterium that could ferment amino acids and organic acids was isolated from an anaerobic, propionate-oxidizing enrichment culture originating from soil of a rice field in Japan. Cells of the isolate, designated strain 4F6E(T), were Gram-staining-negative, oxidase- and catalase-negative, non-spore-fo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.052225-0

    authors: Honda T,Fujita T,Tonouchi A

    更新日期:2013-10-01 00:00:00

  • Umboniibacter marinipuniceus gen. nov., sp. nov., a marine gammaproteobacterium isolated from the mollusc Umbonium costatum from the Sea of Japan.

    abstract::Two bacterial strains, KMM 3891(T) and KMM 3892, were isolated from internal tissues of the marine mollusc Umbonium costatum collected from the Sea of Japan. The novel isolates were Gram-negative, aerobic, faint pink-reddish-pigmented, rod-shaped, non-motile, stenohaline and psychrotolerant bacteria that were unable t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.010728-0

    authors: Romanenko LA,Tanaka N,Frolova GM

    更新日期:2010-03-01 00:00:00