Genetic analysis of tomato root colonization by arbuscular mycorrhizal fungi.

Abstract:

BACKGROUND AND AIMS:Arbuscular mycorrhizal fungi (AMF) play an important role in plant nutrition and protection against pests and diseases, as well as in soil structuration, nutrient cycling and, generally speaking, in sustainable agriculture, particularly under drought, salinity and low input or organic agriculture. However, little is known about the genetics of the AMF-plant association in tomato. The aim of this study was the genetic analysis of root AMF colonization in tomato via the detection of the quantitative trait loci (QTLs) involved. METHODS:A population of 130 recombinant inbred lines derived from the wild species Solanum pimpinellifolium, genotyped for 1899 segregating, non-redundant single nucleotide polymorphisms (SNPs) from the SolCAP tomato panel, was characterized for intensity, frequency and arbuscular abundance of AMF colonization to detect the QTLs involved and to analyse the genes within their peaks (2-2.6 Mbp). KEY RESULTS:The three AMF colonization parameters were highly correlated (0.78-0.97) and the best one, with the highest heritability (0.23), corresponded to colonization intensity. A total of eight QTLs in chromosomes 1, 3, 4, 5, 6, 8, 9 and 10 were detected. Seven of them simultaneously affected intensity and arbuscule abundance. The allele increasing the expression of the trait usually came from the wild parent in accordance with the parental means, and several epistatic interactions were found relevant for breeding purposes. SlCCaMK and SlLYK13 were found among the candidate genes. Carbohydrate transmembrane transporter activity, lipid metabolism and transport, metabolic processes related to nitrogen and phosphate-containing compounds, regulation of carbohydrates, and other biological processes involved in the plant defence were found to be over-represented within the QTL peaks. CONCLUSIONS:Intensity is genetically the best morphological measure of tomato root AMF colonization. Wild alleles can improve AMF colonization, and the gene contents of AMF colonization QTLs might be important for explaining the establishment and functioning of the AMF-plant symbiosis.

journal_name

Ann Bot

journal_title

Annals of botany

authors

Plouznikoff K,Asins MJ,de Boulois HD,Carbonell EA,Declerck S

doi

10.1093/aob/mcy240

subject

Has Abstract

pub_date

2019-11-27 00:00:00

pages

933-946

issue

6

eissn

0305-7364

issn

1095-8290

pii

5312893

journal_volume

124

pub_type

杂志文章
  • Seed-coat dormancy in Grevillea linearifolia: little change in permeability to an apoplastic tracer after treatment with smoke and heat.

    abstract:BACKGROUND AND AIMS:Seeds of Grevillea linearifolia germinate following fire, and have seed-coat dormancy broken by smoke and heat shock. Smoke breaks seed coat dormancy in Emmenanthe penduliflora by altering the permeability of the seed coat to an internal germination inhibitor, which subsequently escapes. This model ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcn006

    authors: Briggs CL,Morris EC

    更新日期:2008-04-01 00:00:00

  • Comparative characterization of GmSPX members reveals that GmSPX3 is involved in phosphate homeostasis in soybean.

    abstract:BACKGROUND AND AIMS:Proteins containing the SPX (SYG1/Pho81/XPR1) domain are vital components in the phosphorus (P) signalling pathway, and regulate phosphate (Pi) homeostasis in plants. However, the characteristics and functions of GmSPX members in soybean (Glycine max) remain largely unknown. METHODS:BLAST searching...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcu147

    authors: Yao Z,Tian J,Liao H

    更新日期:2014-09-01 00:00:00

  • Are bryophytes shade plants? Photosynthetic light responses and proportions of chlorophyll a, chlorophyll b and total carotenoids.

    abstract:BACKGROUND AND AIMS:Data are presented from 39 species of mosses and 16 liverworts for ratios of chlorophylls and total carotenoids, and light saturation of photosynthetic electron flow or photosynthetic CO2 uptake, in relation to the postulate that bryophyte cells in general show shade-plant characteristics. METHODS:...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mch178

    authors: Marschall M,Proctor MC

    更新日期:2004-10-01 00:00:00

  • Tree litter and forest understorey vegetation: a conceptual framework to understand the effects of tree litter on a perennial geophyte, Anemone nemorosa.

    abstract:BACKGROUND AND AIMS:Litter is a key factor in structuring plant populations, through positive or negative interactions. The litter layer forms a mechanical barrier that is often strongly selective against individuals lacking hypocotyle plasticity. Litter composition also interacts with plant growth by providing benefic...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs047

    authors: Baltzinger M,Archaux F,Dumas Y

    更新日期:2012-05-01 00:00:00

  • Cell cycle arrest in plants: what distinguishes quiescence, dormancy and differentiated G1?

    abstract:Background:Quiescence is a fundamental feature of plant life, which enables plasticity, renewal and fidelity of the somatic cell line. Cellular quiescence is defined by arrest in a particular phase of the cell cycle, typically G1 or G2; however, the regulation of quiescence and proliferation can also be considered acro...

    journal_title:Annals of botany

    pub_type: 杂志文章,评审

    doi:10.1093/aob/mcx082

    authors: Velappan Y,Signorelli S,Considine MJ

    更新日期:2017-10-17 00:00:00

  • Ripening of pepper (Capsicum annuum) fruit is characterized by an enhancement of protein tyrosine nitration.

    abstract:BACKGROUND AND AIMS:Pepper (Capsicum annuum, Solanaceae) fruits are consumed worldwide and are of great economic importance. In most species ripening is characterized by important visual and metabolic changes, the latter including emission of volatile organic compounds associated with respiration, destruction of chloro...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcv016

    authors: Chaki M,Álvarez de Morales P,Ruiz C,Begara-Morales JC,Barroso JB,Corpas FJ,Palma JM

    更新日期:2015-09-01 00:00:00

  • Growth habit and mechanical architecture of the sand dune-adapted climber Clematis flammula var. maritima L.

    abstract::Clematis flammula var. maritima is a woody lianoid plant that grows on coastal sand dunes in the Mediterranean region. Older perennial stems are present as extensive underground axes. These generate surface growth of shorter-lived stems producing monospecific trellises above the surface of the sand. Despite its sand d...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcg044

    authors: Isnard S,Rowe N,Speck T

    更新日期:2003-03-01 00:00:00

  • Regulation of soybean seed germination through ethylene production in response to reactive oxygen species.

    abstract:BACKGROUND AND AIMS:Despite their toxicity, reactive oxygen species (ROS) play important roles in plant cell signalling pathways, such as mediating responses to stress or infection and in programmed cell death, at lower levels. Although studies have indicated that hydrogen peroxide (H(2)O(2)) promotes seed germination ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs240

    authors: Ishibashi Y,Koda Y,Zheng SH,Yuasa T,Iwaya-Inoue M

    更新日期:2013-01-01 00:00:00

  • Recovery and fine structure variability of RGII sub-domains in wine (Vitis vinifera Merlot).

    abstract:BACKGROUND AND AIMS:Rhamnogalacturonan II (RGII) is a structurally complex pectic sub-domain composed of more than 12 different sugars and 20 different linkages distributed in five side chains along a homogalacturonan backbone. Although RGII has long been described as highly conserved over plant evolution, recent studi...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcu097

    authors: Buffetto F,Ropartz D,Zhang XJ,Gilbert HJ,Guillon F,Ralet MC

    更新日期:2014-10-01 00:00:00

  • Mating system shifts on the trailing edge.

    abstract:BACKGROUND:The trailing edges of species ranges are becoming a subject of increasing interest as the environment changes due to global warming. Trailing edge populations are likely to face extinction because of a decline in numbers and an inability to evolve new adaptations with sufficient speed. Discussions of charact...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcr159

    authors: Levin DA

    更新日期:2012-02-01 00:00:00

  • Variation of pollinator assemblages and pollen limitation in a locally specialized system: the oil-producing Nierembergia linariifolia (Solanaceae).

    abstract:BACKGROUND AND AIMS:Few studies have examined the dynamics of specialist plant-pollinator interactions at a geographical scale. This knowledge is crucial for a more general evolutionary and ecological understanding of specialized plant-pollinator systems. In the present study, variations in pollinator activity, assembl...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcn154

    authors: Cosacov A,Nattero J,Cocucci AA

    更新日期:2008-11-01 00:00:00

  • Evolutionary diversification and geographical isolation in Dubautia laxa (Asteraceae), a widespread member of the Hawaiian silversword alliance.

    abstract:BACKGROUND AND AIMS:The Hawaiian silversword alliance (Asteraceae) is one the best examples of a plant adaptive radiation, exhibiting extensive morphological and ecological diversity. No research within this group has addressed the role of geographical isolation, independent of ecological adaptation, in contributing to...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcq252

    authors: McGlaughlin ME,Friar EA

    更新日期:2011-03-01 00:00:00

  • Arabinogalactan-protein secretion is associated with the acquisition of stigmatic receptivity in the apple flower.

    abstract:BACKGROUND AND AIMS:Stigmatic receptivity plays a clear role in pollination dynamics; however, little is known about the factors that confer to a stigma the competence to be receptive for the germination of pollen grains. In this work, a developmental approach is used to evaluate the acquisition of stigmatic receptivit...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs116

    authors: Losada JM,Herrero M

    更新日期:2012-08-01 00:00:00

  • Life history traits influence the strength of distance- and density-dependence at different life stages of two Amazonian palms.

    abstract:Background and Aims:Natural enemies are known to be important in regulating plant populations and contributing to species coexistence (Janzen-Connell effects). The strength of Janzen-Connell effects (both distance- and density-effects) varies across species, but the life history traits that may mediate such a variation...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcx051

    authors: Choo J,Carasco C,Alvarez-Loayza P,Simpson BB,Economo EP

    更新日期:2017-07-01 00:00:00

  • Functional utrastructure of Genlisea (Lentibulariaceae) digestive hairs.

    abstract:BACKGROUND AND AIMS:Digestive structures of carnivorous plants produce external digestive enzymes, and play the main role in absorption. In Lentibulariaceae, the ultrastructure of digestive hairs has been examined in some detail in Pinguicula and Utricularia, but the sessile digestive hairs of Genlisea have received ve...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm109

    authors: Płachno BJ,Kozieradzka-Kiszkurno M,Swiatek P

    更新日期:2007-08-01 00:00:00

  • Phylogenetic studies favour the unification of Pennisetum, Cenchrus and Odontelytrum (Poaceae): a combined nuclear, plastid and morphological analysis, and nomenclatural combinations in Cenchrus.

    abstract:BACKGROUNDS AND AIMS:Twenty-five genera having sterile inflorescence branches were recognized as the bristle clade within the x = 9 Paniceae (Panicoideae). Within the bristle clade, taxonomic circumscription of Cenchrus (20-25 species), Pennisetum (80-140) and the monotypic Odontelytrum is still unclear. Several criter...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcq090

    authors: Chemisquy MA,Giussani LM,Scataglini MA,Kellogg EA,Morrone O

    更新日期:2010-07-01 00:00:00

  • Organelle sedimentation in gravitropic roots of Limnobium is restricted to the elongation zone.

    abstract::Roots of the aquatic angiosperm Limnobium spongia (Bosc) Steud. were evaluated by light and electron microscopy to determine the distribution of organelle sedimentation towards gravity. Roots of Limnobium are strongly gravitropic. The rootcap consists of only two layers of cells. Although small amyloplasts are present...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/74.1.35

    authors: Sack FD,Kim D,Stein B

    更新日期:1994-07-01 00:00:00

  • Modulation of host plant immunity by Tobamovirus proteins.

    abstract:Background:To establish successful infection, plant viruses produce profound alterations of host physiology, disturbing unrelated endogenous processes and contributing to the development of disease. In tobamoviruses, emerging evidence suggests that viral-encoded proteins display a great variety of functions beyond the ...

    journal_title:Annals of botany

    pub_type: 杂志文章,评审

    doi:10.1093/aob/mcw216

    authors: Conti G,Rodriguez MC,Venturuzzi AL,Asurmendi S

    更新日期:2017-03-01 00:00:00

  • Assessing the effects of land-use change on plant traits, communities and ecosystem functioning in grasslands: a standardized methodology and lessons from an application to 11 European sites.

    abstract:BACKGROUND AND AIMS:A standardized methodology to assess the impacts of land-use changes on vegetation and ecosystem functioning is presented. It assumes that species traits are central to these impacts, and is designed to be applicable in different historical, climatic contexts and local settings. Preliminary results ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl215

    authors: Garnier E,Lavorel S,Ansquer P,Castro H,Cruz P,Dolezal J,Eriksson O,Fortunel C,Freitas H,Golodets C,Grigulis K,Jouany C,Kazakou E,Kigel J,Kleyer M,Lehsten V,Leps J,Meier T,Pakeman R,Papadimitriou M,Papanastasis VP

    更新日期:2007-05-01 00:00:00

  • Among-species differences in pollen quality and quantity limitation: implications for endemics in biodiverse hotspots.

    abstract:BACKGROUND AND AIMS:Insufficient pollination is a function of quantity and quality of pollen receipt, and the relative contribution of each to pollen limitation may vary with intrinsic plant traits and extrinsic ecological properties. Community-level studies are essential to evaluate variation across species in quality...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mct213

    authors: Alonso C,Navarro-Fernández CM,Arceo-Gómez G,Meindl GA,Parra-Tabla V,Ashman TL

    更新日期:2013-11-01 00:00:00

  • Origin and genetic differentiation of pink-flowered Sorbus hybrids in the Western Carpathians.

    abstract:Background and Aims:Diversity of the genus Sorbus has been affected by interspecific hybridizations. Pink-flowered hybrid species have been insufficiently studied so far. They comprise bigenomic hybrid species derived from crosses S. aria s.l. × S. chamaemespilus and trigenomic ones, where S. aucuparia was involved as ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcx013

    authors: Uhrinová V,Zozomová-Lihová J,Bernátová D,Paule J,Paule L,Gömöry D

    更新日期:2017-08-01 00:00:00

  • Novel thigmomorphogenetic responses in Carica papaya: touch decreases anthocyanin levels and stimulates petiole cork outgrowths.

    abstract:BACKGROUND AND AIMS:Because of its rapid growth rate, relative ease of transformation, sequenced genome and low gene number relative to Arabidopsis, the tropical fruit tree, Carica papaya, can serve as a complementary genetic model for complex traits. Here, new phenotypes and touch-regulated gene homologues have been i...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcp009

    authors: Porter BW,Zhu YJ,Webb DT,Christopher DA

    更新日期:2009-04-01 00:00:00

  • Lower selfing rates in metallicolous populations than in non-metallicolous populations of the pseudometallophyte Noccaea caerulescens (Brassicaceae) in Southern France.

    abstract:BACKGROUND AND AIMS:The pseudometallophyte Noccaea caerulescens is an excellent model to study evolutionary processes, as it grows both on normal and on heavy-metal-rich, toxic soils. The evolution and demography of populations are critically impacted by mating system and, yet, information about the N. caerulescens mat...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcv191

    authors: Mousset M,David P,Petit C,Pouzadoux J,Hatt C,Flaven É,Ronce O,Mignot A

    更新日期:2016-03-01 00:00:00

  • Mapping the genetic and tissular diversity of 64 phenolic compounds in Citrus species using a UPLC-MS approach.

    abstract:BACKGROUND AND AIMS:Phenolic compounds contribute to food quality and have potential health benefits. Consequently, they are an important target of selection for Citrus species. Numerous studies on this subject have revealed new molecules, potential biosynthetic pathways and linkage between species. Although polyphenol...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcv012

    authors: Durand-Hulak M,Dugrand A,Duval T,Bidel LP,Jay-Allemand C,Froelicher Y,Bourgaud F,Fanciullino AL

    更新日期:2015-04-01 00:00:00

  • On the mechanisms of nectar secretion: revisited.

    abstract:BACKGROUND AND SCOPE:Models of nectar formation and exudation in multilayered nectaries with modified stomata or permeable cuticle are evaluated. In the current symplasmic model the pre-nectar moves from terminal phloem through the symplasm into the apoplasm (cell walls and intercellular spaces) with nectar formation b...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcp302

    authors: Vassilyev AE

    更新日期:2010-03-01 00:00:00

  • The endangered Iris atropurpurea (Iridaceae) in Israel: honey-bees, night-sheltering male bees and female solitary bees as pollinators.

    abstract:BACKGROUND AND AIMS:The coastal plain of Israel hosts the last few remaining populations of the endemic Iris atropurpurea (Iridaceae), a Red List species of high conservation priority. The flowers offer no nectar reward. Here the role of night-sheltering male solitary bees, honey-bees and female solitary bees as pollin...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs292

    authors: Watts S,Sapir Y,Segal B,Dafni A

    更新日期:2013-03-01 00:00:00

  • Variation in style morph frequencies in tristylous Lythrum salicaria in the Iberian Peninsula: the role of geographical and demographic factors.

    abstract:BACKGROUND AND AIMS:The balance between stochastic forces and negative frequency-dependent selection largely determines style morph frequencies in heterostylous populations. Investigation of morph frequencies at geographical range limits can provide insights into the forces maintaining the floral polymorphism, and the ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcv173

    authors: Costa J,Castro S,Loureiro J,Barrett SC

    更新日期:2016-02-01 00:00:00

  • Ecology of achene dimorphism in Leontodon saxatilis.

    abstract:BACKGROUND AND AIMS:[corrected] Leontodon saxatilis produces two morphologically distinct achenes (morphs) in a single capitulum: one row of dark brown achenes without a pappus lies at the edge ('peripheral achenes'; 0.74 +/- 0.18 mg) while the inner ones are light brown with a pappus ('central achenes'; 0.38 +/- 0.07 ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcm214

    authors: Brändel M

    更新日期:2007-12-01 00:00:00

  • A rapid decrease in temperature induces latewood formation in artificially reactivated cambium of conifer stems.

    abstract:BACKGROUND AND AIMS:Latewood formation in conifers occurs during the later part of the growing season, when the cell division activity of the cambium declines. Changes in temperature might be important for wood formation in trees. Therefore, the effects of a rapid decrease in temperature on cellular morphology of trach...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcs149

    authors: Begum S,Nakaba S,Yamagishi Y,Yamane K,Islam MA,Oribe Y,Ko JH,Jin HO,Funada R

    更新日期:2012-09-01 00:00:00

  • Predicted changes in vegetation structure affect the susceptibility to invasion of bryophyte-dominated subarctic heath.

    abstract:BACKGROUND AND AIMS:A meta-analysis of global change experiments in arctic tundra sites suggests that plant productivity and the cover of shrubs, grasses and dead plant material (i.e. litter) will increase and the cover of bryophytes will decrease in response to higher air temperatures. However, little is known about w...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcr097

    authors: Eckstein RL,Pereira E,Milbau A,Graae BJ

    更新日期:2011-07-01 00:00:00